RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 IGSF3O75054 1194 aa12.17□□□□□ -0.46
SRP54-208ENST00000555557 BAG3O95817 575 aa12.17□□□□□ -0.46
SRP54-208ENST00000555557 RSBN1LQ6PCB5 846 aaPredicted RBP12.17□□□□□ -0.46
SRP54-208ENST00000555557 TMED8Q6PL24 325 aaPredicted RBP12.17□□□□□ -0.46
SRP54-208ENST00000555557 NAPBQ9H115 298 aa12.17□□□□□ -0.46
SRP54-208ENST00000555557 GAKO14976 1311 aa12.17□□□□□ -0.46
SRP54-208ENST00000555557 SMIM22K7EJ46 135 aa12.16□□□□□ -0.46
SRP54-208ENST00000555557 CD2BP2O95400 341 aaKnown RBP12.16□□□□□ -0.46
SRP54-208ENST00000555557 CRKP46108 304 aa12.16□□□□□ -0.46
SRP54-208ENST00000555557 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
SRP54-208ENST00000555557 TDO2P48775 406 aa12.16□□□□□ -0.46
SRP54-208ENST00000555557 RBM5P52756 815 aaKnown RBP eCLIP12.16□□□□□ -0.46
SRP54-208ENST00000555557 PPP4CP60510 307 aa12.16□□□□□ -0.46
SRP54-208ENST00000555557 RABEP1Q15276 862 aa12.16□□□□□ -0.46
SRP54-208ENST00000555557 STOX1Q6ZVD7 989 aa12.16□□□□□ -0.46
SRP54-208ENST00000555557 SLF2Q8IX21 1173 aa12.16□□□□□ -0.46
SRP54-208ENST00000555557 TEKT1Q969V4 418 aa12.16□□□□□ -0.46
SRP54-208ENST00000555557 JAKMIP1Q96N16 626 aaKnown RBP12.16□□□□□ -0.46
SRP54-208ENST00000555557 NOL10Q9BSC4 688 aaKnown RBP12.16□□□□□ -0.46
SRP54-208ENST00000555557 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
SRP54-208ENST00000555557 ZNF213O14771 459 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 NEK4P51957 841 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 IMMTQ16891 758 aaKnown RBP12.15□□□□□ -0.46
SRP54-208ENST00000555557 CIAPIN1Q6FI81 312 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 STK11IPQ8N1F8 1099 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 TGFBRAP1Q8WUH2 860 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 IL17RAQ96F46 866 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 CRNKL1Q9BZJ0 848 aaKnown RBP12.15□□□□□ -0.46
SRP54-208ENST00000555557 NACAP1Q9BZK3 213 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 CCDC88AQ3V6T2 1871 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 ARFGEF1Q9Y6D6 1849 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 CASTP20810 708 aaKnown RBP12.15□□□□□ -0.46
SRP54-208ENST00000555557 RHBDL3P58872 404 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 EVX2Q03828 476 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 ALX1Q15699 326 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 SLC4A8Q2Y0W8 1093 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 TSGA10IPQ3SY00 556 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 APOBEC3HQ6NTF7 200 aaKnown RBP12.15□□□□□ -0.46
SRP54-208ENST00000555557 HHIPL2Q6UWX4 724 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 GMLQ99445 158 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 DCP1AQ9NPI6 582 aaPredicted RBP12.15□□□□□ -0.46
SRP54-208ENST00000555557 INCENPQ9NQS7 918 aa12.15□□□□□ -0.46
SRP54-208ENST00000555557 MYH2Q9UKX2 1941 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 MAST2Q6P0Q8 1798 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 CYP2D7A0A087X1C5 515 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 MINDY4BA8MYZ0 360 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 E7EWF7 191 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 FZD9O00144 591 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 LMNB1P20700 586 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 USP5P45974 858 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 CTDSPL2Q05D32 466 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 GPR162Q16538 588 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 TEX11Q8IYF3 940 aa12.14□□□□□ -0.47
SRP54-208ENST00000555557 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
SRP54-208ENST00000555557 SHTN1A0MZ66 631 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 USP17L12C9JPN9 530 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 USP17L21D6R901 530 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 EIF6P56537 245 aaKnown RBP12.13□□□□□ -0.47
SRP54-208ENST00000555557 CFAP100Q494V2 611 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 CDC42EP5Q6NZY7 148 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 CTR9Q6PD62 1173 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 TBC1D10CQ8IV04 446 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 TCEANC2Q96MN5 208 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 ZDHHC15Q96MV8 337 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 MRIQ9BWK5 157 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 TBC1D2Q9BYX2 928 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 TACC3Q9Y6A5 838 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 GJA3Q9Y6H8 435 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 MYO3BQ8WXR4 1341 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 ZNF541Q9H0D2 1346 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 ZNF646O15015 1829 aaPredicted RBP12.13□□□□□ -0.47
SRP54-208ENST00000555557 USP17L8P0C7I0 530 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 CYP2D6P10635 497 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 TNIP1Q15025 636 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 AGBL3Q8NEM8 1001 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 DDRGK1Q96HY6 314 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 NEK1Q96PY6 1258 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 ATP8A2Q9NTI2 1148 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 MCM9Q9NXL9 1143 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 MKRN1Q9UHC7 482 aaKnown RBP12.13□□□□□ -0.47
SRP54-208ENST00000555557 SERPINA10Q9UK55 444 aa12.13□□□□□ -0.47
SRP54-208ENST00000555557 RPAP1Q9BWH6 1393 aaPredicted RBP12.12□□□□□ -0.47
SRP54-208ENST00000555557 PLCG2P16885 1265 aa12.12□□□□□ -0.47
SRP54-208ENST00000555557 PSMA5P28066 241 aa12.12□□□□□ -0.47
SRP54-208ENST00000555557 CACNB3P54284 484 aa12.12□□□□□ -0.47
SRP54-208ENST00000555557 HDLBPQ00341 1268 aaKnown RBP12.12□□□□□ -0.47
SRP54-208ENST00000555557 PICALMQ13492 652 aa12.12□□□□□ -0.47
SRP54-208ENST00000555557 KRT32Q14532 448 aa12.12□□□□□ -0.47
SRP54-208ENST00000555557 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
SRP54-208ENST00000555557 RUFY3Q7L099 469 aa12.12□□□□□ -0.47
SRP54-208ENST00000555557 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
SRP54-208ENST00000555557 PRMT6Q96LA8 375 aaPredicted RBP12.12□□□□□ -0.47
SRP54-208ENST00000555557 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
SRP54-208ENST00000555557 TM6SF1Q9BZW5 370 aa12.12□□□□□ -0.47
SRP54-208ENST00000555557 SAP30BPQ9UHR5 308 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms