RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PCDH1Q08174 1060 aa7.43□□□□□ -1.22
SRP54-207ENST00000555535 EHHADHQ08426 723 aa7.43□□□□□ -1.22
SRP54-207ENST00000555535 AOC3Q16853 763 aa7.43□□□□□ -1.22
SRP54-207ENST00000555535 CDCA8Q53HL2 280 aa7.43□□□□□ -1.22
SRP54-207ENST00000555535 ARHGAP27Q6ZUM4 889 aa7.43□□□□□ -1.22
SRP54-207ENST00000555535 TTLL10Q6ZVT0 673 aa7.43□□□□□ -1.22
SRP54-207ENST00000555535 ATCAYQ86WG3 371 aa7.43□□□□□ -1.22
SRP54-207ENST00000555535 GGNBP2Q9H3C7 697 aa7.43□□□□□ -1.22
SRP54-207ENST00000555535 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.43□□□□□ -1.22
SRP54-207ENST00000555535 EREGO14944 169 aa7.42□□□□□ -1.22
SRP54-207ENST00000555535 FAM87AP0C7U9 286 aa7.42□□□□□ -1.22
SRP54-207ENST00000555535 ZMIZ1Q9ULJ6 1067 aa7.42□□□□□ -1.22
SRP54-207ENST00000555535 ZNF503-AS2A6NEH8 195 aa7.41□□□□□ -1.22
SRP54-207ENST00000555535 HNRNPUQ00839 825 aaKnown RBP eCLIP7.41□□□□□ -1.22
SRP54-207ENST00000555535 NOM1Q5C9Z4 860 aaKnown RBP7.41□□□□□ -1.22
SRP54-207ENST00000555535 FAM181AQ8N9Y4 354 aa7.41□□□□□ -1.22
SRP54-207ENST00000555535 LMCD1Q9NZU5 365 aa7.41□□□□□ -1.22
SRP54-207ENST00000555535 SNX11Q9Y5W9 270 aa7.41□□□□□ -1.22
SRP54-207ENST00000555535 AOC2O75106 756 aa7.4□□□□□ -1.22
SRP54-207ENST00000555535 TNFRSF21O75509 655 aa7.4□□□□□ -1.22
SRP54-207ENST00000555535 CLP1Q92989 425 aaKnown RBP7.4□□□□□ -1.22
SRP54-207ENST00000555535 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.22
SRP54-207ENST00000555535 AMOTL2Q9Y2J4 779 aa7.4□□□□□ -1.22
SRP54-207ENST00000555535 CEACAM5P06731 702 aa7.39□□□□□ -1.23
SRP54-207ENST00000555535 BUD31P41223 144 aaPredicted RBP7.39□□□□□ -1.23
SRP54-207ENST00000555535 AFMP43652 599 aa7.39□□□□□ -1.23
SRP54-207ENST00000555535 USP5P45974 858 aa7.39□□□□□ -1.23
SRP54-207ENST00000555535 ALKBH2Q6NS38 261 aa7.39□□□□□ -1.23
SRP54-207ENST00000555535 AMIGO3Q86WK7 504 aa7.39□□□□□ -1.23
SRP54-207ENST00000555535 HELQQ8TDG4 1101 aa7.39□□□□□ -1.23
SRP54-207ENST00000555535 STK32AQ8WU08 396 aa7.39□□□□□ -1.23
SRP54-207ENST00000555535 PIDD1Q9HB75 910 aa7.39□□□□□ -1.23
SRP54-207ENST00000555535 A0A096LPE4 126 aa7.38□□□□□ -1.23
SRP54-207ENST00000555535 A0A1W2PPZ6 126 aa7.38□□□□□ -1.23
SRP54-207ENST00000555535 NFIBO00712 420 aa7.38□□□□□ -1.23
SRP54-207ENST00000555535 CTSBP07858 339 aa7.38□□□□□ -1.23
SRP54-207ENST00000555535 ZNF423Q2M1K9 1284 aa7.38□□□□□ -1.23
SRP54-207ENST00000555535 PEAR1Q5VY43 1037 aaPredicted RBP7.38□□□□□ -1.23
SRP54-207ENST00000555535 SYDE1Q6ZW31 735 aaPredicted RBP7.38□□□□□ -1.23
SRP54-207ENST00000555535 ATXN3LQ9H3M9 355 aa7.38□□□□□ -1.23
SRP54-207ENST00000555535 LGR6Q9HBX8 967 aa7.38□□□□□ -1.23
SRP54-207ENST00000555535 CRIM1Q9NZV1 1036 aa7.38□□□□□ -1.23
SRP54-207ENST00000555535 A6NHS1 94 aa7.37□□□□□ -1.23
SRP54-207ENST00000555535 CDK5R2Q13319 367 aa7.37□□□□□ -1.23
SRP54-207ENST00000555535 ASB11Q8WXH4 323 aa7.37□□□□□ -1.23
SRP54-207ENST00000555535 B3GALT4O96024 378 aa7.36□□□□□ -1.23
SRP54-207ENST00000555535 CD96P40200 585 aa7.36□□□□□ -1.23
SRP54-207ENST00000555535 OXCT1P55809 520 aa7.36□□□□□ -1.23
SRP54-207ENST00000555535 AP3B2Q13367 1082 aa7.36□□□□□ -1.23
SRP54-207ENST00000555535 PDE3AQ14432 1141 aa7.36□□□□□ -1.23
SRP54-207ENST00000555535 CCNJLQ8IV13 435 aa7.36□□□□□ -1.23
SRP54-207ENST00000555535 WDR18Q9BV38 432 aa7.36□□□□□ -1.23
SRP54-207ENST00000555535 METTL12A8MUP2 240 aa7.35□□□□□ -1.23
SRP54-207ENST00000555535 GLI1P08151 1106 aa7.35□□□□□ -1.23
SRP54-207ENST00000555535 SLFN14P0C7P3 912 aa7.35□□□□□ -1.23
SRP54-207ENST00000555535 TNKS2Q9H2K2 1166 aa7.35□□□□□ -1.23
SRP54-207ENST00000555535 ECM1Q16610 540 aa7.34□□□□□ -1.23
SRP54-207ENST00000555535 MPZL3Q6UWV2 235 aa7.34□□□□□ -1.23
SRP54-207ENST00000555535 SMYD4Q8IYR2 804 aaPredicted RBP7.34□□□□□ -1.23
SRP54-207ENST00000555535 LIN37Q96GY3 246 aaPredicted RBP7.34□□□□□ -1.23
SRP54-207ENST00000555535 TRIM56Q9BRZ2 755 aaKnown RBP7.34□□□□□ -1.23
SRP54-207ENST00000555535 LATS2Q9NRM7 1088 aa7.34□□□□□ -1.23
SRP54-207ENST00000555535 PPP1R9AQ9ULJ8 1098 aa7.34□□□□□ -1.23
SRP54-207ENST00000555535 CTNND2Q9UQB3 1225 aa7.34□□□□□ -1.23
SRP54-207ENST00000555535 ATG7O95352 703 aa7.33□□□□□ -1.24
SRP54-207ENST00000555535 EIF1AXP47813 144 aaKnown RBP7.33□□□□□ -1.24
SRP54-207ENST00000555535 FBXO15Q8NCQ5 510 aaPredicted RBP7.33□□□□□ -1.24
SRP54-207ENST00000555535 SEPT3Q9UH03 358 aa7.33□□□□□ -1.24
SRP54-207ENST00000555535 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.32□□□□□ -1.24
SRP54-207ENST00000555535 TMPRSS2O15393 492 aa7.32□□□□□ -1.24
SRP54-207ENST00000555535 CTSWP56202 376 aa7.32□□□□□ -1.24
SRP54-207ENST00000555535 ID3Q02535 119 aa7.32□□□□□ -1.24
SRP54-207ENST00000555535 ZP2Q05996 745 aa7.32□□□□□ -1.24
SRP54-207ENST00000555535 IKZF1Q13422 519 aa7.32□□□□□ -1.24
SRP54-207ENST00000555535 TMEM164Q5U3C3 297 aa7.32□□□□□ -1.24
SRP54-207ENST00000555535 DUSP23Q9BVJ7 150 aa7.32□□□□□ -1.24
SRP54-207ENST00000555535 ZFYVE28Q9HCC9 887 aa7.32□□□□□ -1.24
SRP54-207ENST00000555535 POLIQ9UNA4 740 aa7.32□□□□□ -1.24
SRP54-207ENST00000555535 PLAGL2Q9UPG8 496 aa7.32□□□□□ -1.24
SRP54-207ENST00000555535 C1QTNF9P0C862 333 aa7.31□□□□□ -1.24
SRP54-207ENST00000555535 ATP2B4P23634 1241 aa7.31□□□□□ -1.24
SRP54-207ENST00000555535 TMEM67Q5HYA8 995 aa7.31□□□□□ -1.24
SRP54-207ENST00000555535 KIRREL1Q96J84 757 aa7.31□□□□□ -1.24
SRP54-207ENST00000555535 FANCD2OSQ96PS1 177 aa7.31□□□□□ -1.24
SRP54-207ENST00000555535 LIN7BQ9HAP6 207 aa7.31□□□□□ -1.24
SRP54-207ENST00000555535 FOXD3Q9UJU5 478 aaPredicted RBP7.31□□□□□ -1.24
SRP54-207ENST00000555535 PCOLCE2Q9UKZ9 415 aa7.31□□□□□ -1.24
SRP54-207ENST00000555535 ECEL1O95672 775 aa7.3□□□□□ -1.24
SRP54-207ENST00000555535 INHBBP09529 407 aa7.3□□□□□ -1.24
SRP54-207ENST00000555535 PRKCSHP14314 528 aaPredicted RBP7.3□□□□□ -1.24
SRP54-207ENST00000555535 GRIA4P48058 902 aa7.3□□□□□ -1.24
SRP54-207ENST00000555535 PRR23BQ6ZRT6 265 aa7.3□□□□□ -1.24
SRP54-207ENST00000555535 TMEM253P0C7T8 217 aa7.29□□□□□ -1.24
SRP54-207ENST00000555535 AAMPQ13685 434 aa7.29□□□□□ -1.24
SRP54-207ENST00000555535 CIAPIN1Q6FI81 312 aa7.29□□□□□ -1.24
SRP54-207ENST00000555535 TCF12Q99081 682 aa7.29□□□□□ -1.24
SRP54-207ENST00000555535 PRDM7Q9NQW5 492 aa7.29□□□□□ -1.24
SRP54-207ENST00000555535 GTF2IRD1Q9UHL9 959 aa7.29□□□□□ -1.24
SRP54-207ENST00000555535 U3KQE9 123 aa7.29□□□□□ -1.24
SRP54-207ENST00000555535 A0A1W2PP55 124 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms