RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 CEBPZQ03701 1054 aaKnown RBP9.52□□□□□ -0.89
LINC00641-201ENST00000555379 AP1ARQ63HQ0 302 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 RTKN2Q8IZC4 609 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.52□□□□□ -0.89
LINC00641-201ENST00000555379 ITGA6P23229 1130 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 CKAP4Q07065 602 aaKnown RBP9.52□□□□□ -0.89
LINC00641-201ENST00000555379 SEPT6Q14141 434 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 GNPTABQ3T906 1256 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 SUPT20HL1Q3ZLR7 823 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 ODR4Q5SWX8 454 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 TMCO3Q6UWJ1 677 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 FSIP1Q8NA03 581 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 FAM13AO94988 1023 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 MCM4P33991 863 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 MMP14P50281 582 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 MAP3K9P80192 1104 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 LRSAM1Q6UWE0 723 aa9.52□□□□□ -0.89
LINC00641-201ENST00000555379 JCADQ9P266 1359 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 PRDM15P57071 1507 aaPredicted RBP9.51□□□□□ -0.89
LINC00641-201ENST00000555379 PRC1O43663 620 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 GTF2F1P35269 517 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00641-201ENST00000555379 CLEC4GQ6UXB4 293 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 KRT27Q7Z3Y8 459 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 IFT74Q96LB3 600 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 UBA5Q9GZZ9 404 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 RBM8AQ9Y5S9 174 aaKnown RBP9.51□□□□□ -0.89
LINC00641-201ENST00000555379 MICU3Q86XE3 530 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 KRT222Q8N1A0 295 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 ZNF219Q9P2Y4 722 aaPredicted RBP9.51□□□□□ -0.89
LINC00641-201ENST00000555379 UNC13BO14795 1591 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 A0A1B0GUA9 196 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 RPS8P62241 208 aaKnown RBP9.51□□□□□ -0.89
LINC00641-201ENST00000555379 FAM98CQ17RN3 349 aaKnown RBP9.51□□□□□ -0.89
LINC00641-201ENST00000555379 LUZP1Q86V48 1076 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 HOMER2Q9NSB8 354 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 PHACTR2O75167 634 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 SDSP20132 328 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 COPB2P35606 906 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 TRIM14Q14142 442 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 CEP85Q6P2H3 762 aa9.51□□□□□ -0.89
LINC00641-201ENST00000555379 QTRT2Q9H974 415 aaKnown RBP9.51□□□□□ -0.89
LINC00641-201ENST00000555379 RNF17Q9BXT8 1623 aaKnown RBP9.51□□□□□ -0.89
LINC00641-201ENST00000555379 KRT26Q7Z3Y9 468 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 MRPS27Q92552 414 aaKnown RBP9.5□□□□□ -0.89
LINC00641-201ENST00000555379 VTI1AQ96AJ9 217 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 CLIP2Q9UDT6 1046 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 CTNNA2P26232 953 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 SLC39A6Q13433 755 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 DCPSQ96C86 337 aaKnown RBP9.5□□□□□ -0.89
LINC00641-201ENST00000555379 MIS12Q9H081 205 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 XDHP47989 1333 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 MAP3K15Q6ZN16 1313 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 TBC1D9Q6ZT07 1266 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 HEATR3Q7Z4Q2 680 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 SMC5Q8IY18 1101 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 IQUBQ8NA54 791 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 ZBTB38Q8NAP3 1195 aaPredicted RBP9.5□□□□□ -0.89
LINC00641-201ENST00000555379 RASAL2Q9UJF2 1139 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 TPCN1Q9ULQ1 816 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 KDM3AQ9Y4C1 1321 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 GJB2P29033 226 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 SYKP43405 635 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 CCDC14Q49A88 953 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 PPP1R2P3Q6NXS1 205 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 GBP6Q6ZN66 633 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 MAGEB6Q8N7X4 407 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 TRERF1Q96PN7 1200 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 DSCC1Q9BVC3 393 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 STMN4Q9H169 189 aaPredicted RBP9.5□□□□□ -0.89
LINC00641-201ENST00000555379 SPATA31E1Q6ZUB1 1445 aa9.5□□□□□ -0.89
LINC00641-201ENST00000555379 PRIM1P49642 420 aaKnown RBP9.49□□□□□ -0.89
LINC00641-201ENST00000555379 TNNI3KQ59H18 835 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 NOX5Q96PH1 765 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 ORAI2Q96SN7 254 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 FPGT-TNNI3KV9GXZ4 949 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 PLA2R1Q13018 1463 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 ZEB2O60315 1214 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 IDEP14735 1019 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 UTP14CQ5TAP6 766 aaKnown RBP9.49□□□□□ -0.89
LINC00641-201ENST00000555379 ARHGEF25Q86VW2 580 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 JAKMIP2Q96AA8 810 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 MEIS3Q99687 375 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 SELENOOQ9BVL4 669 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 PPIP5K2O43314 1243 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 FOSP01100 380 aaPredicted RBP9.49□□□□□ -0.89
LINC00641-201ENST00000555379 ZSCAN22P10073 491 aaPredicted RBP9.49□□□□□ -0.89
LINC00641-201ENST00000555379 CCDC93Q567U6 631 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 DTHD1Q6ZMT9 781 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 KIFAP3Q92845 792 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 ZRANB1Q9UGI0 708 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 NOD1Q9Y239 953 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 PTCH1Q13635 1447 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 DIP2AQ14689 1571 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 CTSWP56202 376 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 AZI2Q9H6S1 392 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 ATP8A2Q9NTI2 1148 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 ZBTB12Q9Y330 459 aaPredicted RBP9.49□□□□□ -0.89
LINC00641-201ENST00000555379 ATP2A1O14983 1001 aa9.49□□□□□ -0.89
LINC00641-201ENST00000555379 EIF4A1P60842 406 aaKnown RBP9.49□□□□□ -0.89
LINC00641-201ENST00000555379 C8orf58Q8NAV2 365 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms