RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 GTF2IP78347 998 aa12.91□□□□□ -0.34
GABRB3-208ENST00000555094 GSTO1P78417 241 aa12.91□□□□□ -0.34
GABRB3-208ENST00000555094 KIAA2012Q0VF49 1180 aa12.91□□□□□ -0.34
GABRB3-208ENST00000555094 DIXDC1Q155Q3 683 aa12.91□□□□□ -0.34
GABRB3-208ENST00000555094 NOL8Q76FK4 1167 aaKnown RBP12.91□□□□□ -0.34
GABRB3-208ENST00000555094 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
GABRB3-208ENST00000555094 IFNL3Q8IZI9 196 aa12.91□□□□□ -0.34
GABRB3-208ENST00000555094 SUPT20HQ8NEM7 779 aa12.91□□□□□ -0.34
GABRB3-208ENST00000555094 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
GABRB3-208ENST00000555094 ALDH8A1Q9H2A2 487 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-208ENST00000555094 DBNDD1Q9H9R9 158 aa12.91□□□□□ -0.34
GABRB3-208ENST00000555094 ECM29Q5VYK3 1845 aa12.91□□□□□ -0.34
GABRB3-208ENST00000555094 ECE2O60344 883 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 CUL4AQ13619 759 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 AOC3Q16853 763 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 RTKN2Q8IZC4 609 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 CERS5Q8N5B7 392 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 SDR42E1Q8WUS8 393 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 PSMD1Q99460 953 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 NACAP1Q9BZK3 213 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 NAPBQ9H115 298 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 AATFQ9NY61 560 aaKnown RBP eCLIP12.9□□□□□ -0.34
GABRB3-208ENST00000555094 PIM2Q9P1W9 311 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 CD2APQ9Y5K6 639 aa12.9□□□□□ -0.34
GABRB3-208ENST00000555094 GAKO14976 1311 aa12.89□□□□□ -0.35
GABRB3-208ENST00000555094 ZNF213O14771 459 aa12.89□□□□□ -0.35
GABRB3-208ENST00000555094 HMGB1P09429 215 aaKnown RBP12.89□□□□□ -0.35
GABRB3-208ENST00000555094 TDO2P48775 406 aa12.89□□□□□ -0.35
GABRB3-208ENST00000555094 TOB2Q14106 344 aaPredicted RBP12.89□□□□□ -0.35
GABRB3-208ENST00000555094 PODNQ7Z5L7 613 aa12.89□□□□□ -0.35
GABRB3-208ENST00000555094 FBXW7Q969H0 707 aa12.89□□□□□ -0.35
GABRB3-208ENST00000555094 LIMCH1Q9UPQ0 1083 aa12.89□□□□□ -0.35
GABRB3-208ENST00000555094 SUGT1Q9Y2Z0 365 aa12.89□□□□□ -0.35
GABRB3-208ENST00000555094 G3V3G9 751 aa12.88□□□□□ -0.35
GABRB3-208ENST00000555094 LARGE1O95461 756 aa12.88□□□□□ -0.35
GABRB3-208ENST00000555094 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
GABRB3-208ENST00000555094 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
GABRB3-208ENST00000555094 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
GABRB3-208ENST00000555094 MB21D2Q8IYB1 491 aaPredicted RBP12.88□□□□□ -0.35
GABRB3-208ENST00000555094 CRNKL1Q9BZJ0 848 aaKnown RBP12.88□□□□□ -0.35
GABRB3-208ENST00000555094 NEDD4P46934 1319 aa12.88□□□□□ -0.35
GABRB3-208ENST00000555094 PPIP5K2O43314 1243 aa12.87□□□□□ -0.35
GABRB3-208ENST00000555094 LDHCP07864 332 aa12.87□□□□□ -0.35
GABRB3-208ENST00000555094 HSP90AA1P07900 732 aaKnown RBP12.87□□□□□ -0.35
GABRB3-208ENST00000555094 PPP4CP60510 307 aa12.87□□□□□ -0.35
GABRB3-208ENST00000555094 FKBP1AP62942 108 aaKnown RBP12.87□□□□□ -0.35
GABRB3-208ENST00000555094 EXOSC10Q01780 885 aaKnown RBP12.87□□□□□ -0.35
GABRB3-208ENST00000555094 DALRD3Q5D0E6 543 aaKnown RBP12.87□□□□□ -0.35
GABRB3-208ENST00000555094 DHX32Q7L7V1 743 aaKnown RBP12.87□□□□□ -0.35
GABRB3-208ENST00000555094 SH3RF3Q8TEJ3 882 aaPredicted RBP12.87□□□□□ -0.35
GABRB3-208ENST00000555094 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
GABRB3-208ENST00000555094 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
GABRB3-208ENST00000555094 MXD3Q9BW11 206 aa12.87□□□□□ -0.35
GABRB3-208ENST00000555094 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
GABRB3-208ENST00000555094 MYH1P12882 1939 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 GPR75-ASB3A0A0A6YYF3 556 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 BTDP43251 543 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 ANTXR2P58335 489 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 CTDSPL2Q05D32 466 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 ANKRD1Q15327 319 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 DACT2Q5SW24 774 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 STRIP1Q5VSL9 837 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 Q6ZUG5 572 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 AGXT2Q9BYV1 514 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 KCNQ5Q9NR82 932 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 ATP8A2Q9NTI2 1148 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 PPP1R1BQ9UD71 204 aaPredicted RBP12.86□□□□□ -0.35
GABRB3-208ENST00000555094 ANAPC4Q9UJX5 808 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 TPCN1Q9ULQ1 816 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 DAGLAQ9Y4D2 1042 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
GABRB3-208ENST00000555094 YDJCA8MPS7 323 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 BAG3O95817 575 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 PPARAQ07869 468 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 ST3GAL1Q11201 340 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 RALYLQ86SE5 291 aaKnown RBP12.85□□□□□ -0.35
GABRB3-208ENST00000555094 CERS3Q8IU89 383 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 SLF2Q8IX21 1173 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 NKX2-3Q8TAU0 364 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 STAG1Q8WVM7 1258 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 ZSCAN31Q96LW9 406 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-208ENST00000555094 NOL10Q9BSC4 688 aaKnown RBP12.85□□□□□ -0.35
GABRB3-208ENST00000555094 LRRC2Q9BYS8 371 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-208ENST00000555094 SH2B1Q9NRF2 756 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-208ENST00000555094 ZNF277Q9NRM2 450 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-208ENST00000555094 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-208ENST00000555094 CYP2D7A0A087X1C5 515 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 USP17L3A6NCW0 530 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 USP17L4A6NCW7 530 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 RHBDL3P58872 404 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 ME3Q16798 604 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 AKNAD1Q5T1N1 836 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 USP17L1Q7RTZ2 530 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 NLGN2Q8NFZ4 835 aa12.85□□□□□ -0.35
GABRB3-208ENST00000555094 INTS4Q96HW7 963 aaKnown RBP12.85□□□□□ -0.35
GABRB3-208ENST00000555094 VPS33BQ9H267 617 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms