RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	ADAM23	O75077	832 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	CYP11A1	P05108	521 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	ITGB7	P26010	798 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	FDX2	Q6P4F2	183 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	TPTE2	Q6XPS3	522 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	ARMC10	Q8N2F6	343 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	STK35	Q8TDR2	534 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	FAM161B	Q96MY7	647 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	CORO1B	Q9BR76	489 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	CEP41	Q9BYV8	373 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	ZC3H12C	Q9C0D7	883 aa	Known RBP	8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	SRCIN1	Q9C0H9	1055 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	PARP2	Q9UGN5	583 aa		8.7	□□□□□ -1.02
PSMC6-208	ENST00000554956	ADAMTS12	P58397	1594 aa		8.69	□□□□□ -1.02
PSMC6-208	ENST00000554956	TOP2B	Q02880	1626 aa		8.69	□□□□□ -1.02
PSMC6-208	ENST00000554956	MEGF11	A6BM72	1044 aa		8.69	□□□□□ -1.02
PSMC6-208	ENST00000554956	GIPC1	O14908	333 aa		8.69	□□□□□ -1.02
PSMC6-208	ENST00000554956	NUTM2G	Q5VZR2	741 aa		8.69	□□□□□ -1.02
PSMC6-208	ENST00000554956	ANKRD34A	Q69YU3	496 aa		8.69	□□□□□ -1.02
PSMC6-208	ENST00000554956	DDX54	Q8TDD1	881 aa	Known RBP	8.69	□□□□□ -1.02
PSMC6-208	ENST00000554956	FAM46A	Q96IP4	442 aa	Known RBP	8.69	□□□□□ -1.02
PSMC6-208	ENST00000554956	TMEM39A	Q9NV64	488 aa		8.69	□□□□□ -1.02
PSMC6-208	ENST00000554956	FAM8A1	Q9UBU6	413 aa		8.69	□□□□□ -1.02
PSMC6-208	ENST00000554956	DRD2	P14416	443 aa		8.68	□□□□□ -1.02
PSMC6-208	ENST00000554956	EIF4B	P23588	611 aa	Known RBP	8.68	□□□□□ -1.02
PSMC6-208	ENST00000554956	AP3B2	Q13367	1082 aa		8.68	□□□□□ -1.02
PSMC6-208	ENST00000554956	UTP4	Q969X6	686 aa	Known RBP	8.68	□□□□□ -1.02
PSMC6-208	ENST00000554956	SART1	O43290	800 aa	Known RBP	8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	PAGE1	O75459	146 aa		8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	H2AFB1	P0C5Y9	115 aa		8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	H2AFB2	P0C5Z0	115 aa		8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	PDE3A	Q14432	1141 aa		8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	EXOSC6	Q5RKV6	272 aa	Known RBP	8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	C12orf50	Q8NA57	414 aa	Predicted RBP	8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	SMG8	Q8ND04	991 aa	Known RBP	8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	NECAB3	Q96P71	396 aa	Predicted RBP	8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	ZFYVE1	Q9HBF4	777 aa		8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	AK5	Q9Y6K8	562 aa		8.67	□□□□□ -1.02
PSMC6-208	ENST00000554956	BIVM-ERCC5	R4GMW8	1640 aa		8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	PRG4	Q92954	1404 aa	Predicted RBP	8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	ENC1	O14682	589 aa		8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	TIAF1	O95411	115 aa		8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	PPP2R3A	Q06190	1150 aa		8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	PRR23C	Q6ZRP0	262 aa		8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	SULF2	Q8IWU5	870 aa		8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	FRMD6	Q96NE9	622 aa		8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	CCDC86	Q9H6F5	360 aa	Known RBP	8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	SUGCT	Q9HAC7	445 aa		8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	PPM1H	Q9ULR3	514 aa		8.66	□□□□□ -1.02
PSMC6-208	ENST00000554956	EIF4EBP3	O60516	100 aa	Predicted RBP	8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	CELA3A	P09093	270 aa		8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	GSTP1	P09211	210 aa	Known RBP	8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	LIG1	P18858	919 aa		8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	ERCC3	P19447	782 aa		8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	MFAP1	P55081	439 aa	Known RBP	8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	PSMD2	Q13200	908 aa		8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	AKAP4	Q5JQC9	854 aa		8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	PDZD3	Q86UT5	571 aa		8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	WDR89	Q96FK6	387 aa	Predicted RBP	8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	MYRFL	Q96LU7	910 aa		8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	CYP4F12	Q9HCS2	524 aa		8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	TTF2	Q9UNY4	1162 aa	Known RBP	8.65	□□□□□ -1.02
PSMC6-208	ENST00000554956	ERICH3	Q5RHP9	1530 aa		8.64	□□□□□ -1.03
PSMC6-208	ENST00000554956	GAS2	O43903	313 aa	Known RBP	8.64	□□□□□ -1.03
PSMC6-208	ENST00000554956	ADH5	P11766	374 aa		8.64	□□□□□ -1.03
PSMC6-208	ENST00000554956	DAB2	P98082	770 aa		8.64	□□□□□ -1.03
PSMC6-208	ENST00000554956	FGD1	P98174	961 aa		8.64	□□□□□ -1.03
PSMC6-208	ENST00000554956	XPC	Q01831	940 aa	Predicted RBP	8.64	□□□□□ -1.03
PSMC6-208	ENST00000554956	UVSSA	Q2YD98	709 aa		8.64	□□□□□ -1.03
PSMC6-208	ENST00000554956	C2CD4A	Q8NCU7	369 aa	Predicted RBP	8.64	□□□□□ -1.03
PSMC6-208	ENST00000554956	WDR18	Q9BV38	432 aa		8.64	□□□□□ -1.03
PSMC6-208	ENST00000554956	SHROOM2	Q13796	1616 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	DHX15	O43143	795 aa	Known RBP	8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	ZNF862	O60290	1169 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	AOC2	O75106	756 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	BMP3	P12645	472 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	SOX4	Q06945	474 aa	Predicted RBP	8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	SGO2	Q562F6	1265 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	PRSS36	Q5K4E3	855 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	MEI1	Q5TIA1	1274 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	RASIP1	Q5U651	963 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	MPRIP	Q6WCQ1	1025 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	GIPC2	Q8TF65	315 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	KCNB2	Q92953	911 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	BCL2L13	Q9BXK5	485 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	RAD18	Q9NS91	495 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	RAX	Q9Y2V3	346 aa		8.63	□□□□□ -1.03
PSMC6-208	ENST00000554956	NME2	P22392	152 aa		8.62	□□□□□ -1.03
PSMC6-208	ENST00000554956	ARNT	P27540	789 aa		8.62	□□□□□ -1.03
PSMC6-208	ENST00000554956	TMC4	Q7Z404	712 aa		8.62	□□□□□ -1.03
PSMC6-208	ENST00000554956	FAM20C	Q8IXL6	584 aa		8.62	□□□□□ -1.03
PSMC6-208	ENST00000554956	GRIN3A	Q8TCU5	1115 aa		8.62	□□□□□ -1.03
PSMC6-208	ENST00000554956	CEP44	Q9C0F1	390 aa		8.62	□□□□□ -1.03
PSMC6-208	ENST00000554956	CBX8	Q9HC52	389 aa		8.62	□□□□□ -1.03
PSMC6-208	ENST00000554956	AP4E1	Q9UPM8	1137 aa		8.62	□□□□□ -1.03
PSMC6-208	ENST00000554956	CTSH	P09668	335 aa		8.61	□□□□□ -1.03
PSMC6-208	ENST00000554956	BMP6	P22004	513 aa		8.61	□□□□□ -1.03
PSMC6-208	ENST00000554956	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	8.61	□□□□□ -1.03
PSMC6-208	ENST00000554956	MAP1S	Q66K74	1059 aa	Predicted RBP	8.61	□□□□□ -1.03

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms