RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PPP2R2CQ9Y2T4 447 aa17.92■□□□□ 0.46
SYNE3-203ENST00000554873 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
SYNE3-203ENST00000554873 CCDC102AQ96A19 550 aa17.92■□□□□ 0.46
SYNE3-203ENST00000554873 FTOQ9C0B1 505 aaKnown RBP eCLIP17.92■□□□□ 0.46
SYNE3-203ENST00000554873 A1CFQ9NQ94 594 aaKnown RBP17.92■□□□□ 0.46
SYNE3-203ENST00000554873 SIPA1L3O60292 1781 aaPredicted RBP17.91■□□□□ 0.46
SYNE3-203ENST00000554873 FOSBP53539 338 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 DDX46Q7L014 1031 aaKnown RBP17.91■□□□□ 0.46
SYNE3-203ENST00000554873 HAUS7Q99871 368 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 ACBD3Q9H3P7 528 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 RCOR1Q9UKL0 485 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 GOLIM4O00461 696 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 PFKFB2O60825 505 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 CHMP4BP1P59074 171 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 ENGASEQ8NFI3 743 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 KIFC2Q96AC6 838 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 ORAI2Q96SN7 254 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 FAM204AQ9H8W3 233 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 ANKZF1Q9H8Y5 726 aa17.91■□□□□ 0.46
SYNE3-203ENST00000554873 CTDNEP1O95476 244 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 CALRP27797 417 aaKnown RBP17.9■□□□□ 0.46
SYNE3-203ENST00000554873 PIP4K2AP48426 406 aaPredicted RBP17.9■□□□□ 0.46
SYNE3-203ENST00000554873 LIG3P49916 1009 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 MSANTD4Q8NCY6 345 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 NSUN7Q8NE18 718 aaKnown RBP17.9■□□□□ 0.46
SYNE3-203ENST00000554873 FBXW7Q969H0 707 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 DHX58Q96C10 678 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 LLPHQ9BRT6 129 aaKnown RBP17.9■□□□□ 0.46
SYNE3-203ENST00000554873 EXOC5O00471 708 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 ARHGAP6O43182 974 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 SETQ01105 290 aaPredicted RBP17.9■□□□□ 0.46
SYNE3-203ENST00000554873 UBE3BQ7Z3V4 1068 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 SRGAP1Q7Z6B7 1085 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 LRP10Q7Z4F1 713 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 SLC52A2Q9HAB3 445 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 ABCB6Q9NP58 842 aa17.9■□□□□ 0.46
SYNE3-203ENST00000554873 CASP8Q14790 479 aa17.89■□□□□ 0.45
SYNE3-203ENST00000554873 RABL6Q3YEC7 729 aaPredicted RBP17.89■□□□□ 0.45
SYNE3-203ENST00000554873 NAA16Q6N069 864 aaPredicted RBP17.89■□□□□ 0.45
SYNE3-203ENST00000554873 GBP6Q6ZN66 633 aa17.89■□□□□ 0.45
SYNE3-203ENST00000554873 DHX32Q7L7V1 743 aaKnown RBP17.89■□□□□ 0.45
SYNE3-203ENST00000554873 GIMAP7Q8NHV1 300 aa17.89■□□□□ 0.45
SYNE3-203ENST00000554873 ZNF496Q96IT1 587 aaPredicted RBP17.89■□□□□ 0.45
SYNE3-203ENST00000554873 RBM28Q9NW13 759 aaKnown RBP17.89■□□□□ 0.45
SYNE3-203ENST00000554873 CCDC9Q9Y3X0 531 aaKnown RBP17.89■□□□□ 0.45
SYNE3-203ENST00000554873 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
SYNE3-203ENST00000554873 TUBB4BP68371 445 aa17.89■□□□□ 0.45
SYNE3-203ENST00000554873 PPP2R5AQ15172 486 aa17.89■□□□□ 0.45
SYNE3-203ENST00000554873 GNL3LQ9NVN8 582 aaKnown RBP17.89■□□□□ 0.45
SYNE3-203ENST00000554873 RFX7Q2KHR2 1363 aa17.88■□□□□ 0.45
SYNE3-203ENST00000554873 PHACTR2O75167 634 aa17.88■□□□□ 0.45
SYNE3-203ENST00000554873 AFAP1L1Q8TED9 768 aa17.88■□□□□ 0.45
SYNE3-203ENST00000554873 USP28Q96RU2 1077 aa17.88■□□□□ 0.45
SYNE3-203ENST00000554873 GBP3Q9H0R5 595 aa17.88■□□□□ 0.45
SYNE3-203ENST00000554873 CCT2P78371 535 aaKnown RBP17.88■□□□□ 0.45
SYNE3-203ENST00000554873 FANCCQ00597 558 aa17.88■□□□□ 0.45
SYNE3-203ENST00000554873 FBXW10Q5XX13 1052 aa17.88■□□□□ 0.45
SYNE3-203ENST00000554873 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
SYNE3-203ENST00000554873 SGSM3Q96HU1 749 aa17.88■□□□□ 0.45
SYNE3-203ENST00000554873 PTPDC1A2A3K4 754 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 ATP5J2-PTCD1G3V325 749 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 KIF3CO14782 793 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 PTCD1O75127 700 aaKnown RBP17.87■□□□□ 0.45
SYNE3-203ENST00000554873 MAP2K1Q02750 393 aaPredicted RBP17.87■□□□□ 0.45
SYNE3-203ENST00000554873 DPCR1Q3MIW9 517 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 KBTBD3Q8NAB2 608 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 PNKPQ96T60 521 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 CUTAO60888 179 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 PPFIA3O75145 1194 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 HMGB1P09429 215 aaKnown RBP17.87■□□□□ 0.45
SYNE3-203ENST00000554873 EXOSC10Q01780 885 aaKnown RBP17.87■□□□□ 0.45
SYNE3-203ENST00000554873 MAP9Q49MG5 647 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 RNF217Q8TC41 542 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 TBC1D22AQ8WUA7 517 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 ERCC4Q92889 916 aaPredicted RBP17.87■□□□□ 0.45
SYNE3-203ENST00000554873 SUGCTQ9HAC7 445 aa17.87■□□□□ 0.45
SYNE3-203ENST00000554873 SCP2P22307 547 aa17.86■□□□□ 0.45
SYNE3-203ENST00000554873 CEP112Q8N8E3 955 aa17.86■□□□□ 0.45
SYNE3-203ENST00000554873 FSIP1Q8NA03 581 aa17.86■□□□□ 0.45
SYNE3-203ENST00000554873 A0A087WZG4 1122 aa17.86■□□□□ 0.45
SYNE3-203ENST00000554873 A0A0G2JLW4 131 aa17.86■□□□□ 0.45
SYNE3-203ENST00000554873 WWC2Q6AWC2 1192 aa17.86■□□□□ 0.45
SYNE3-203ENST00000554873 ZSWIM4Q9H7M6 989 aa17.86■□□□□ 0.45
SYNE3-203ENST00000554873 NCOA5Q9HCD5 579 aaKnown RBP17.86■□□□□ 0.45
SYNE3-203ENST00000554873 FAM169AQ9Y6X4 670 aa17.86■□□□□ 0.45
SYNE3-203ENST00000554873 CBFA2T2O43439 604 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 MIEF2Q96C03 454 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 SDF4Q9BRK5 362 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 C5P01031 1676 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 SH3TC1Q8TE82 1336 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 ADAMTS7Q9UKP4 1686 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 WDHD1O75717 1129 aaPredicted RBP17.85■□□□□ 0.45
SYNE3-203ENST00000554873 NCAPHQ15003 741 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 TMEM139Q8IV31 216 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 KDM6AO15550 1401 aaPredicted RBP17.85■□□□□ 0.45
SYNE3-203ENST00000554873 SLIT3O75094 1523 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 EBAG9O00559 213 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 RNF40O75150 1001 aa17.85■□□□□ 0.45
SYNE3-203ENST00000554873 GUCY1B3Q02153 619 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms