RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 NIP7Q9Y221 180 aaKnown RBP eCLIP15.69■□□□□ 0.1
VTI1B-204ENST00000554659 NLRP12P59046 1061 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 TTC16Q8NEE8 873 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 RASSF4Q9H2L5 321 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 CTNND2Q9UQB3 1225 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 KIAA0556O60303 1618 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 MAP3K19Q56UN5 1328 aa15.69■□□□□ 0.1
VTI1B-204ENST00000554659 TNNI2P48788 182 aa15.68■□□□□ 0.1
VTI1B-204ENST00000554659 SYNCQ9H7C4 482 aa15.68■□□□□ 0.1
VTI1B-204ENST00000554659 EYA2O00167 538 aa15.68■□□□□ 0.1
VTI1B-204ENST00000554659 FAM13AO94988 1023 aa15.68■□□□□ 0.1
VTI1B-204ENST00000554659 CCT6AP40227 531 aaKnown RBP15.68■□□□□ 0.1
VTI1B-204ENST00000554659 WDR78Q5VTH9 848 aa15.68■□□□□ 0.1
VTI1B-204ENST00000554659 DZIP3Q86Y13 1208 aaKnown RBP15.68■□□□□ 0.1
VTI1B-204ENST00000554659 EDC4Q6P2E9 1401 aaKnown RBP15.68■□□□□ 0.1
VTI1B-204ENST00000554659 SPDYE3A6NKU9 549 aa15.68■□□□□ 0.1
VTI1B-204ENST00000554659 ARHGAP6O43182 974 aa15.68■□□□□ 0.1
VTI1B-204ENST00000554659 GADD45BO75293 160 aaPredicted RBP15.68■□□□□ 0.1
VTI1B-204ENST00000554659 AFAP1L1Q8TED9 768 aa15.68■□□□□ 0.1
VTI1B-204ENST00000554659 PPP1R9BQ96SB3 815 aa15.68■□□□□ 0.1
VTI1B-204ENST00000554659 TLDC2A0PJX2 215 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 SMIM23A6NLE4 172 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 ATP6V1AP38606 617 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 TM6SF1Q9BZW5 370 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 ANGEL1Q9UNK9 670 aaKnown RBP15.67■□□□□ 0.1
VTI1B-204ENST00000554659 MBD4O95243 580 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 RPL13P26373 211 aaKnown RBP15.67■□□□□ 0.1
VTI1B-204ENST00000554659 SV2BQ7L1I2 683 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 NAP1L3Q99457 506 aaPredicted RBP15.67■□□□□ 0.1
VTI1B-204ENST00000554659 SAMD15Q9P1V8 674 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 ABCC10Q5T3U5 1492 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 A6NNZ2 444 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 TUBB8Q3ZCM7 444 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 GSTA5Q7RTV2 222 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 IP6K1Q92551 441 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 NOC4LQ9BVI4 516 aaKnown RBP15.67■□□□□ 0.1
VTI1B-204ENST00000554659 SSH2Q76I76 1423 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 PABPN1LA6NDY0 278 aaKnown RBP15.67■□□□□ 0.1
VTI1B-204ENST00000554659 ZNF174Q15697 407 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 GBP6Q6ZN66 633 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 METTL22Q9BUU2 404 aaPredicted RBP15.67■□□□□ 0.1
VTI1B-204ENST00000554659 NYXQ9GZU5 481 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 SYNRGQ9UMZ2 1314 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 A0A1B0GUL7 405 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 ARL1P40616 181 aaPredicted RBP15.67■□□□□ 0.1
VTI1B-204ENST00000554659 TBC1D8BQ0IIM8 1120 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 VWA3BQ502W6 1294 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 RAB3IL1Q8TBN0 382 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 IMPG2Q9BZV3 1241 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 MTUS1Q9ULD2 1270 aa15.67■□□□□ 0.1
VTI1B-204ENST00000554659 CCDC63Q8NA47 563 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 CCDC26Q8TAB7 109 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 APPBP2Q92624 585 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 MPHOSPH6Q99547 160 aaKnown RBP15.66■□□□□ 0.1
VTI1B-204ENST00000554659 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 ELF2Q15723 593 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 FAM173BQ6P4H8 233 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 FAM227BQ96M60 508 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 CARD6Q9BX69 1037 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 ASXL2Q76L83 1435 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 WDHD1O75717 1129 aaPredicted RBP15.66■□□□□ 0.1
VTI1B-204ENST00000554659 CCDC65Q8IXS2 484 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 PLBD2Q8NHP8 589 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 TMEM63CQ9P1W3 806 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 STIM2Q9P246 746 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 ZNF202O95125 648 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 KRBA2Q6ZNG9 492 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 B4GALNT4Q76KP1 1039 aa15.66■□□□□ 0.1
VTI1B-204ENST00000554659 TMEM110-MUSTN1A8MSY1 372 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 B4E1Z4 1266 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 IL2RBP14784 551 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 CALCOCO2Q13137 446 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 TMTC1Q8IUR5 882 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 ADGRL2O95490 1459 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 NAA25Q14CX7 972 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 DBNDD2Q9BQY9 259 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 NUP58Q9BVL2 599 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 PSMC4P43686 418 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 CNNM4Q6P4Q7 775 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 CDC37L1Q7L3B6 337 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 SIRT1Q96EB6 747 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 RSRC1Q96IZ7 334 aaKnown RBP15.65■□□□□ 0.1
VTI1B-204ENST00000554659 MAST1Q9Y2H9 1570 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 WDR7Q9Y4E6 1490 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 PICALMQ13492 652 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 KBTBD3Q8NAB2 608 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 HELBQ8NG08 1087 aaPredicted RBP15.65■□□□□ 0.1
VTI1B-204ENST00000554659 ANKRD2Q9GZV1 360 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 VPS16Q9H269 839 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 ATP6V0A2Q9Y487 856 aa15.65■□□□□ 0.1
VTI1B-204ENST00000554659 GJC1P36383 396 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 SEPT6Q14141 434 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 C17orf53Q8N3J3 647 aaPredicted RBP15.64■□□□□ 0.09
VTI1B-204ENST00000554659 NGLY1Q96IV0 654 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 NCOA5Q9HCD5 579 aaKnown RBP15.64■□□□□ 0.09
VTI1B-204ENST00000554659 EEF2P13639 858 aaKnown RBP15.64■□□□□ 0.09
VTI1B-204ENST00000554659 C8orf74Q6P047 294 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 JAKMIP2Q96AA8 810 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 ZNF219Q9P2Y4 722 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms