RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 RPAP1Q9BWH6 1393 aaPredicted RBP10.75□□□□□ -0.69
ACTN1-213ENST00000554508 CAPN15O75808 1086 aa10.74□□□□□ -0.69
ACTN1-213ENST00000554508 ALDH1A1P00352 501 aa10.74□□□□□ -0.69
ACTN1-213ENST00000554508 ARID4AP29374 1257 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-213ENST00000554508 CACNB3P54284 484 aa10.74□□□□□ -0.69
ACTN1-213ENST00000554508 MKRN3Q13064 507 aaKnown RBP10.74□□□□□ -0.69
ACTN1-213ENST00000554508 DCAF15Q66K64 600 aa10.74□□□□□ -0.69
ACTN1-213ENST00000554508 CDC42EP5Q6NZY7 148 aa10.74□□□□□ -0.69
ACTN1-213ENST00000554508 ERICH6Q7L0X2 663 aa10.74□□□□□ -0.69
ACTN1-213ENST00000554508 PANK1Q8TE04 598 aa10.74□□□□□ -0.69
ACTN1-213ENST00000554508 FAM163AQ96GL9 167 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-213ENST00000554508 CFHR5Q9BXR6 569 aa10.74□□□□□ -0.69
ACTN1-213ENST00000554508 CHMP4BQ9H444 224 aaKnown RBP10.74□□□□□ -0.69
ACTN1-213ENST00000554508 C1orf115Q9H7X2 142 aa10.74□□□□□ -0.69
ACTN1-213ENST00000554508 RCAN3Q9UKA8 241 aa10.74□□□□□ -0.69
ACTN1-213ENST00000554508 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-213ENST00000554508 TNNI3KQ59H18 835 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 NOM1Q5C9Z4 860 aaKnown RBP10.73□□□□□ -0.69
ACTN1-213ENST00000554508 CCDC158Q5M9N0 1113 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 OTUD7BQ6GQQ9 843 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 CEP85Q6P2H3 762 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-213ENST00000554508 DZIP1Q86YF9 867 aaKnown RBP10.73□□□□□ -0.69
ACTN1-213ENST00000554508 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 SPATA5Q8NB90 893 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 ABHD8Q96I13 439 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 USP40Q9NVE5 1235 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 HMG20BQ9P0W2 317 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-213ENST00000554508 DDX19BQ9UMR2 479 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 CSADQ9Y600 493 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 FPGT-TNNI3KV9GXZ4 949 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 GAKO14976 1311 aa10.73□□□□□ -0.69
ACTN1-213ENST00000554508 TBC1D8O95759 1140 aa10.72□□□□□ -0.69
ACTN1-213ENST00000554508 LDHCP07864 332 aa10.72□□□□□ -0.69
ACTN1-213ENST00000554508 GSTO1P78417 241 aa10.72□□□□□ -0.69
ACTN1-213ENST00000554508 DGKZQ13574 1117 aa10.72□□□□□ -0.69
ACTN1-213ENST00000554508 TTC39AQ5SRH9 613 aa10.72□□□□□ -0.69
ACTN1-213ENST00000554508 ERC1Q8IUD2 1116 aa10.72□□□□□ -0.69
ACTN1-213ENST00000554508 RPAP2Q8IXW5 612 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-213ENST00000554508 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.72□□□□□ -0.69
ACTN1-213ENST00000554508 ZNF512BQ96KM6 892 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-213ENST00000554508 IDI2Q9BXS1 227 aa10.72□□□□□ -0.69
ACTN1-213ENST00000554508 ZNF341Q9BYN7 854 aa10.72□□□□□ -0.69
ACTN1-213ENST00000554508 MCOLN1Q9GZU1 580 aa10.72□□□□□ -0.69
ACTN1-213ENST00000554508 ELP3Q9H9T3 547 aa10.72□□□□□ -0.69
ACTN1-213ENST00000554508 MYO5AQ9Y4I1 1855 aaKnown RBP10.72□□□□□ -0.69
ACTN1-213ENST00000554508 MROH7-TTC4A0A0A0MT08 1334 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 TESPA1A2RU30 521 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-213ENST00000554508 IGSF3O75054 1194 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 ENTPD3O75355 529 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 MAP4K4O95819 1239 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-213ENST00000554508 MCAMP43121 646 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 MECOMQ03112 1051 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 NFIAQ12857 509 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 VGLL4Q14135 290 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 HSP90AB4PQ58FF6 505 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 IFNL1Q8IU54 200 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-213ENST00000554508 DOCK2Q92608 1830 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 OPTNQ96CV9 577 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
ACTN1-213ENST00000554508 GPR75-ASB3A0A0A6YYF3 556 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 SPDYE5A6NIY4 337 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 GPR25O00155 361 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 HMMRO75330 724 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 GJA5P36382 358 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 BTDP43251 543 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 GTF2A2P52657 109 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 TCP10Q12799 353 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 PDE3AQ14432 1141 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 ERO1BQ86YB8 467 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 ZNF296Q8WUU4 475 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-213ENST00000554508 NSUN4Q96CB9 384 aaKnown RBP10.7□□□□□ -0.7
ACTN1-213ENST00000554508 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 DBNDD2Q9BQY9 259 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 ZBTB40Q9NUA8 1239 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 RAI14Q9P0K7 980 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 LRP2BPQ9P2M1 347 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 ZNF112Q9UJU3 913 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 COG6Q9Y2V7 657 aa10.7□□□□□ -0.7
ACTN1-213ENST00000554508 IGF2BP3O00425 579 aaKnown RBP eCLIP10.69□□□□□ -0.7
ACTN1-213ENST00000554508 FKTNO75072 461 aa10.69□□□□□ -0.7
ACTN1-213ENST00000554508 NPM3O75607 178 aaKnown RBP10.69□□□□□ -0.7
ACTN1-213ENST00000554508 RGS3P49796 1198 aa10.69□□□□□ -0.7
ACTN1-213ENST00000554508 PKN2Q16513 984 aaKnown RBP10.69□□□□□ -0.7
ACTN1-213ENST00000554508 PI16Q6UXB8 463 aa10.69□□□□□ -0.7
ACTN1-213ENST00000554508 TBC1D9Q6ZT07 1266 aa10.69□□□□□ -0.7
ACTN1-213ENST00000554508 MIGA2Q7L4E1 593 aa10.69□□□□□ -0.7
ACTN1-213ENST00000554508 CTU1Q7Z7A3 348 aaKnown RBP10.69□□□□□ -0.7
ACTN1-213ENST00000554508 ZNF384Q8TF68 577 aa10.69□□□□□ -0.7
ACTN1-213ENST00000554508 EAF2Q96CJ1 260 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-213ENST00000554508 MS4A4AQ96JQ5 239 aa10.69□□□□□ -0.7
ACTN1-213ENST00000554508 WDHD1O75717 1129 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-213ENST00000554508 MAP3K10Q02779 954 aa10.68□□□□□ -0.7
ACTN1-213ENST00000554508 PPATQ06203 517 aa10.68□□□□□ -0.7
ACTN1-213ENST00000554508 PPIL2Q13356 520 aa10.68□□□□□ -0.7
ACTN1-213ENST00000554508 ZSCAN29Q8IWY8 852 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-213ENST00000554508 ZFPM1Q8IX07 1006 aa10.68□□□□□ -0.7
ACTN1-213ENST00000554508 ZKSCAN4Q969J2 545 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms