RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 ELP3Q9H9T3 547 aa14.26□□□□□ -0.13
TMEM253-203ENST00000554329 USP40Q9NVE5 1235 aa14.26□□□□□ -0.13
TMEM253-203ENST00000554329 RAI14Q9P0K7 980 aa14.26□□□□□ -0.13
TMEM253-203ENST00000554329 NOP58Q9Y2X3 529 aaKnown RBP14.26□□□□□ -0.13
TMEM253-203ENST00000554329 MAST3O60307 1309 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 TRPA1O75762 1119 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 MS4A1P11836 297 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 GJA5P36382 358 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 MAP2K2P36507 400 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 BTDP43251 543 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 MMP14P50281 582 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 PICALMQ13492 652 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 HHIPL2Q6UWX4 724 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 BEGAINQ9BUH8 593 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 PIH1D3Q9NQM4 214 aaKnown RBP14.25□□□□□ -0.13
TMEM253-203ENST00000554329 FAM198AQ9UFP1 575 aa14.25□□□□□ -0.13
TMEM253-203ENST00000554329 SALL1Q9NSC2 1324 aa14.24□□□□□ -0.13
TMEM253-203ENST00000554329 SEMA3EO15041 775 aa14.24□□□□□ -0.13
TMEM253-203ENST00000554329 CYP2E1P05181 493 aaPredicted RBP14.24□□□□□ -0.13
TMEM253-203ENST00000554329 RRP1P56182 461 aaKnown RBP14.24□□□□□ -0.13
TMEM253-203ENST00000554329 FKBP1BP68106 108 aa14.24□□□□□ -0.13
TMEM253-203ENST00000554329 HDLBPQ00341 1268 aaKnown RBP14.24□□□□□ -0.13
TMEM253-203ENST00000554329 ERICH6Q7L0X2 663 aa14.24□□□□□ -0.13
TMEM253-203ENST00000554329 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
TMEM253-203ENST00000554329 RHPN1Q8TCX5 695 aa14.24□□□□□ -0.13
TMEM253-203ENST00000554329 CCDC102AQ96A19 550 aa14.24□□□□□ -0.13
TMEM253-203ENST00000554329 ANTXR1Q9H6X2 564 aa14.24□□□□□ -0.13
TMEM253-203ENST00000554329 DDX4Q9NQI0 724 aaKnown RBP14.24□□□□□ -0.13
TMEM253-203ENST00000554329 TMOD2Q9NZR1 351 aa14.24□□□□□ -0.13
TMEM253-203ENST00000554329 TNNI2P48788 182 aa14.23□□□□□ -0.13
TMEM253-203ENST00000554329 TNFAIP1Q13829 316 aa14.23□□□□□ -0.13
TMEM253-203ENST00000554329 SUPT20HL1Q3ZLR7 823 aa14.23□□□□□ -0.13
TMEM253-203ENST00000554329 LDLRAD1Q5T700 205 aa14.23□□□□□ -0.13
TMEM253-203ENST00000554329 ADGRA1Q86SQ6 560 aa14.23□□□□□ -0.13
TMEM253-203ENST00000554329 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.23□□□□□ -0.13
TMEM253-203ENST00000554329 CRBNQ96SW2 442 aa14.23□□□□□ -0.13
TMEM253-203ENST00000554329 RNF186Q9NXI6 227 aa14.23□□□□□ -0.13
TMEM253-203ENST00000554329 SUGT1Q9Y2Z0 365 aa14.23□□□□□ -0.13
TMEM253-203ENST00000554329 PPP2R3BQ9Y5P8 575 aa14.23□□□□□ -0.13
TMEM253-203ENST00000554329 MAST2Q6P0Q8 1798 aa14.23□□□□□ -0.13
TMEM253-203ENST00000554329 DOCK2Q92608 1830 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 MROH7-TTC4A0A0A0MT08 1334 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 FAM196BA6NMK8 535 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 PPP1R12BO60237 982 aaPredicted RBP14.22□□□□□ -0.13
TMEM253-203ENST00000554329 TBC1D8O95759 1140 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 RGS3P49796 1198 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 SLC4A8Q2Y0W8 1093 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 CCDC158Q5M9N0 1113 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 ZKSCAN4Q969J2 545 aaPredicted RBP14.22□□□□□ -0.13
TMEM253-203ENST00000554329 NSUN4Q96CB9 384 aaKnown RBP14.22□□□□□ -0.13
TMEM253-203ENST00000554329 SLC10A4Q96EP9 437 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 EDC3Q96F86 508 aaKnown RBP14.22□□□□□ -0.13
TMEM253-203ENST00000554329 R3HDMLQ9H3Y0 253 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 GPR108Q9NPR9 543 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 LRP2BPQ9P2M1 347 aa14.22□□□□□ -0.13
TMEM253-203ENST00000554329 GAKO14976 1311 aa14.21□□□□□ -0.13
TMEM253-203ENST00000554329 UQCRFS1P1P0C7P4 283 aa14.21□□□□□ -0.13
TMEM253-203ENST00000554329 INPP5BP32019 993 aa14.21□□□□□ -0.13
TMEM253-203ENST00000554329 VGLL4Q14135 290 aa14.21□□□□□ -0.13
TMEM253-203ENST00000554329 PDE3AQ14432 1141 aa14.21□□□□□ -0.13
TMEM253-203ENST00000554329 SPRYD7Q5W111 196 aa14.21□□□□□ -0.13
TMEM253-203ENST00000554329 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.21□□□□□ -0.13
TMEM253-203ENST00000554329 SH3BP5LQ7L8J4 393 aa14.21□□□□□ -0.13
TMEM253-203ENST00000554329 ZGPATQ8N5A5 531 aaKnown RBP14.21□□□□□ -0.13
TMEM253-203ENST00000554329 WNK4Q96J92 1243 aa14.21□□□□□ -0.13
TMEM253-203ENST00000554329 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.21□□□□□ -0.13
TMEM253-203ENST00000554329 CDK5RAP2Q96SN8 1893 aa14.21□□□□□ -0.14
TMEM253-203ENST00000554329 DDTLA6NHG4 134 aaPredicted RBP14.2□□□□□ -0.14
TMEM253-203ENST00000554329 WDHD1O75717 1129 aaPredicted RBP14.2□□□□□ -0.14
TMEM253-203ENST00000554329 CHGBP05060 677 aa14.2□□□□□ -0.14
TMEM253-203ENST00000554329 IREB2P48200 963 aaKnown RBP14.2□□□□□ -0.14
TMEM253-203ENST00000554329 DYNLL1P63167 89 aaKnown RBP14.2□□□□□ -0.14
TMEM253-203ENST00000554329 SLFNL1Q499Z3 407 aa14.2□□□□□ -0.14
TMEM253-203ENST00000554329 TSHZ3Q63HK5 1081 aa14.2□□□□□ -0.14
TMEM253-203ENST00000554329 ZSCAN29Q8IWY8 852 aaPredicted RBP14.2□□□□□ -0.14
TMEM253-203ENST00000554329 RPAP2Q8IXW5 612 aaPredicted RBP14.2□□□□□ -0.14
TMEM253-203ENST00000554329 SH3RF3Q8TEJ3 882 aaPredicted RBP14.2□□□□□ -0.14
TMEM253-203ENST00000554329 OPTNQ96CV9 577 aa14.2□□□□□ -0.14
TMEM253-203ENST00000554329 WRNIP1Q96S55 665 aa14.2□□□□□ -0.14
TMEM253-203ENST00000554329 MRIQ9BWK5 157 aa14.2□□□□□ -0.14
TMEM253-203ENST00000554329 AATFQ9NY61 560 aaKnown RBP eCLIP14.2□□□□□ -0.14
TMEM253-203ENST00000554329 PCDHB15Q9Y5E8 787 aa14.2□□□□□ -0.14
TMEM253-203ENST00000554329 PDS5AQ29RF7 1337 aaKnown RBP14.19□□□□□ -0.14
TMEM253-203ENST00000554329 IDH1O75874 414 aaKnown RBP14.19□□□□□ -0.14
TMEM253-203ENST00000554329 RHBDL3P58872 404 aa14.19□□□□□ -0.14
TMEM253-203ENST00000554329 MAP3K11Q16584 847 aa14.19□□□□□ -0.14
TMEM253-203ENST00000554329 SPTY2D1Q68D10 685 aaPredicted RBP14.19□□□□□ -0.14
TMEM253-203ENST00000554329 CCDC84Q86UT8 332 aaPredicted RBP14.19□□□□□ -0.14
TMEM253-203ENST00000554329 MIGA1Q8NAN2 632 aa14.19□□□□□ -0.14
TMEM253-203ENST00000554329 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.19□□□□□ -0.14
TMEM253-203ENST00000554329 FAM151AQ8WW52 585 aa14.19□□□□□ -0.14
TMEM253-203ENST00000554329 OTUD5Q96G74 571 aa14.19□□□□□ -0.14
TMEM253-203ENST00000554329 DNAJC2Q99543 621 aaKnown RBP14.19□□□□□ -0.14
TMEM253-203ENST00000554329 RFX7Q2KHR2 1363 aa14.19□□□□□ -0.14
TMEM253-203ENST00000554329 IGF2BP3O00425 579 aaKnown RBP eCLIP14.18□□□□□ -0.14
TMEM253-203ENST00000554329 HMMRO75330 724 aa14.18□□□□□ -0.14
TMEM253-203ENST00000554329 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
TMEM253-203ENST00000554329 NAA16Q6N069 864 aaPredicted RBP14.18□□□□□ -0.14
TMEM253-203ENST00000554329 FAM83AQ86UY5 434 aa14.18□□□□□ -0.14
TMEM253-203ENST00000554329 ERC1Q8IUD2 1116 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms