RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 SERPINA10Q9UK55 444 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 PALD1Q9ULE6 856 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 TTF2Q9UNY4 1162 aaKnown RBP9.12□□□□□ -0.95
TDP1-209ENST00000554180 SNX14Q9Y5W7 946 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 SLC4A4Q9Y6R1 1079 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 ZNF646O15015 1829 aaPredicted RBP9.12□□□□□ -0.95
TDP1-209ENST00000554180 PSME4Q14997 1843 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 SCN9AQ15858 1988 aa9.12□□□□□ -0.95
TDP1-209ENST00000554180 ST18O60284 1047 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 APPP05067 770 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 CYP21A2P08686 494 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 LMNB1P20700 586 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 RPS12P25398 132 aaKnown RBP9.11□□□□□ -0.95
TDP1-209ENST00000554180 BTDP43251 543 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 RASSF7Q02833 373 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 TNIP1Q15025 636 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 RASEFQ8IZ41 740 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 IFNL3Q8IZI9 196 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 SNX21Q969T3 373 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 ZDHHC15Q96MV8 337 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 NAPBQ9H115 298 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 EPB41L4AQ9HCS5 686 aaPredicted RBP9.11□□□□□ -0.95
TDP1-209ENST00000554180 KCNQ5Q9NR82 932 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 DAGLAQ9Y4D2 1042 aa9.11□□□□□ -0.95
TDP1-209ENST00000554180 SRCAPQ6ZRS2 3230 aa9.1□□□□□ -0.95
TDP1-209ENST00000554180 FZD9O00144 591 aa9.1□□□□□ -0.95
TDP1-209ENST00000554180 PSMD14O00487 310 aa9.1□□□□□ -0.95
TDP1-209ENST00000554180 ZNF213O14771 459 aa9.1□□□□□ -0.95
TDP1-209ENST00000554180 HMGB1P09429 215 aaKnown RBP9.1□□□□□ -0.95
TDP1-209ENST00000554180 PCP11498 1178 aaKnown RBP9.1□□□□□ -0.95
TDP1-209ENST00000554180 TDO2P48775 406 aa9.1□□□□□ -0.95
TDP1-209ENST00000554180 NT5C2P49902 561 aa9.1□□□□□ -0.95
TDP1-209ENST00000554180 DYNLL1P63167 89 aaKnown RBP9.1□□□□□ -0.95
TDP1-209ENST00000554180 BECN1Q14457 450 aa9.1□□□□□ -0.95
TDP1-209ENST00000554180 CIAPIN1Q6FI81 312 aa9.1□□□□□ -0.95
TDP1-209ENST00000554180 KIAA0825Q8IV33 1275 aa9.1□□□□□ -0.95
TDP1-209ENST00000554180 GMLQ99445 158 aa9.1□□□□□ -0.95
TDP1-209ENST00000554180 DCP1AQ9NPI6 582 aaPredicted RBP9.1□□□□□ -0.95
TDP1-209ENST00000554180 ARPP21Q9UBL0 812 aaPredicted RBP9.1□□□□□ -0.95
TDP1-209ENST00000554180 F8W031 263 aaPredicted RBP9.09□□□□□ -0.95
TDP1-209ENST00000554180 PRKAB2O43741 272 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 RAD17O75943 681 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 CASTP20810 708 aaKnown RBP9.09□□□□□ -0.95
TDP1-209ENST00000554180 CRKP46108 304 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 MCM2P49736 904 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 EIF6P56537 245 aaKnown RBP9.09□□□□□ -0.95
TDP1-209ENST00000554180 RHBDL3P58872 404 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 CXCL9Q07325 125 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 SBK1Q52WX2 424 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 APOBEC3HQ6NTF7 200 aaKnown RBP9.09□□□□□ -0.95
TDP1-209ENST00000554180 ARHGAP27Q6ZUM4 889 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 AMOTL1Q8IY63 956 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 TEX11Q8IYF3 940 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 OGFOD1Q8N543 542 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 SDR42E1Q8WUS8 393 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 JAKMIP1Q96N16 626 aaKnown RBP9.09□□□□□ -0.95
TDP1-209ENST00000554180 IPO9Q96P70 1041 aaKnown RBP9.09□□□□□ -0.95
TDP1-209ENST00000554180 MXD3Q9BW11 206 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 ZSWIM6Q9HCJ5 1215 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 MKRN1Q9UHC7 482 aaKnown RBP9.09□□□□□ -0.95
TDP1-209ENST00000554180 ANAPC4Q9UJX5 808 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 HDAC9Q9UKV0 1011 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 CYP46A1Q9Y6A2 500 aa9.09□□□□□ -0.95
TDP1-209ENST00000554180 TIAM2Q8IVF5 1701 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 MYH2Q9UKX2 1941 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 E7EWF7 191 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 NPM3O75607 178 aaKnown RBP9.08□□□□□ -0.96
TDP1-209ENST00000554180 USP17L8P0C7I0 530 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 YBX3P16989 372 aaKnown RBP eCLIP9.08□□□□□ -0.96
TDP1-209ENST00000554180 USP5P45974 858 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 SCNN1DP51172 638 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 PRELPP51888 382 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 NEK4P51957 841 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 PPARAQ07869 468 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 ADCK5Q3MIX3 580 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 BLOC1S2Q6QNY1 142 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 RUFY3Q7L099 469 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 HSCBQ8IWL3 235 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 MTMR14Q8NCE2 650 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 SH3RF3Q8TEJ3 882 aaPredicted RBP9.08□□□□□ -0.96
TDP1-209ENST00000554180 STAG1Q8WVM7 1258 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 DPF2Q92785 391 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 NEK1Q96PY6 1258 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 ALDH8A1Q9H2A2 487 aaPredicted RBP9.08□□□□□ -0.96
TDP1-209ENST00000554180 RNF41Q9H4P4 317 aaPredicted RBP9.08□□□□□ -0.96
TDP1-209ENST00000554180 CNNM2Q9H8M5 875 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 TAOK2Q9UL54 1235 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 ROBO3Q96MS0 1386 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 LAMA4Q16363 1823 aa9.08□□□□□ -0.96
TDP1-209ENST00000554180 FLT1P17948 1338 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 WDR19Q8NEZ3 1342 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 ZC3H4Q9UPT8 1303 aaKnown RBP9.07□□□□□ -0.96
TDP1-209ENST00000554180 SPDYE2BA6NHP3 402 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 GRIN3BO60391 1043 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 SLC3A2P08195 630 aaKnown RBP9.07□□□□□ -0.96
TDP1-209ENST00000554180 SPDYE6P0CI01 402 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 RPS6KB1P23443 525 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 ZNF280AP59817 542 aaPredicted RBP9.07□□□□□ -0.96
TDP1-209ENST00000554180 TRDNQ13061 729 aa9.07□□□□□ -0.96
TDP1-209ENST00000554180 CFAP100Q494V2 611 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms