RNA–Protein interactions for RNA: ENST00000554014.6

NUMB-208, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-208ENST00000554014 RILPL2Q969X0 211 aa11.24□□□□□ -0.61
NUMB-208ENST00000554014 ZBED3Q96IU2 234 aaPredicted RBP11.24□□□□□ -0.61
NUMB-208ENST00000554014 MYOZ2Q9NPC6 264 aa11.24□□□□□ -0.61
NUMB-208ENST00000554014 NMRK2Q9NPI5 230 aa11.24□□□□□ -0.61
NUMB-208ENST00000554014 ASTN2O75129 1339 aaPredicted RBP11.24□□□□□ -0.61
NUMB-208ENST00000554014 ZNF532Q9HCE3 1301 aa11.24□□□□□ -0.61
NUMB-208ENST00000554014 SIPA1L1O43166 1804 aa11.24□□□□□ -0.61
NUMB-208ENST00000554014 MYH1P12882 1939 aa11.24□□□□□ -0.61
NUMB-208ENST00000554014 CFAP100Q494V2 611 aa11.23□□□□□ -0.61
NUMB-208ENST00000554014 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
NUMB-208ENST00000554014 TEKT1Q969V4 418 aa11.23□□□□□ -0.61
NUMB-208ENST00000554014 ZDHHC15Q96MV8 337 aa11.23□□□□□ -0.61
NUMB-208ENST00000554014 SERPINA10Q9UK55 444 aa11.23□□□□□ -0.61
NUMB-208ENST00000554014 LAMA4Q16363 1823 aa11.23□□□□□ -0.61
NUMB-208ENST00000554014 HIRAP54198 1017 aaPredicted RBP11.23□□□□□ -0.61
NUMB-208ENST00000554014 HDLBPQ00341 1268 aaKnown RBP11.23□□□□□ -0.61
NUMB-208ENST00000554014 APOBEC3HQ6NTF7 200 aaKnown RBP11.23□□□□□ -0.61
NUMB-208ENST00000554014 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
NUMB-208ENST00000554014 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.23□□□□□ -0.61
NUMB-208ENST00000554014 TAF1DQ9H5J8 278 aaPredicted RBP11.23□□□□□ -0.61
NUMB-208ENST00000554014 HACL1Q9UJ83 578 aa11.23□□□□□ -0.61
NUMB-208ENST00000554014 HDAC9Q9UKV0 1011 aa11.23□□□□□ -0.61
NUMB-208ENST00000554014 A0A0D9SFI3 127 aa11.22□□□□□ -0.61
NUMB-208ENST00000554014 RNF113AO15541 343 aaKnown RBP11.22□□□□□ -0.61
NUMB-208ENST00000554014 CYP7A1P22680 504 aa11.22□□□□□ -0.61
NUMB-208ENST00000554014 LMOD1P29536 600 aaPredicted RBP11.22□□□□□ -0.61
NUMB-208ENST00000554014 UBE3CQ15386 1083 aa11.22□□□□□ -0.61
NUMB-208ENST00000554014 KIF4BQ2VIQ3 1234 aa11.22□□□□□ -0.61
NUMB-208ENST00000554014 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
NUMB-208ENST00000554014 HHIPL2Q6UWX4 724 aa11.22□□□□□ -0.61
NUMB-208ENST00000554014 OGFOD1Q8N543 542 aa11.22□□□□□ -0.61
NUMB-208ENST00000554014 MTMR14Q8NCE2 650 aa11.22□□□□□ -0.61
NUMB-208ENST00000554014 PRMT6Q96LA8 375 aaPredicted RBP11.22□□□□□ -0.61
NUMB-208ENST00000554014 SEC62Q99442 399 aaKnown RBP11.22□□□□□ -0.61
NUMB-208ENST00000554014 MRIQ9BWK5 157 aa11.22□□□□□ -0.61
NUMB-208ENST00000554014 ADARB2Q9NS39 739 aaKnown RBP11.22□□□□□ -0.61
NUMB-208ENST00000554014 GPR75-ASB3A0A0A6YYF3 556 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 H7C1D1 291 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 M0R2C6 588 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 WNT10BO00744 389 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 IGSF3O75054 1194 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 GABBR2O75899 941 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 EPHX2P34913 555 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 BTDP43251 543 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.61
NUMB-208ENST00000554014 GSTO1P78417 241 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 ZMYM1Q5SVZ6 1142 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 MIGA1Q8NAN2 632 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 OSBP2Q969R2 916 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 FAM227BQ96M60 508 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 RIOK1Q9BRS2 568 aaKnown RBP11.21□□□□□ -0.61
NUMB-208ENST00000554014 IL25Q9H293 177 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 RRAGCQ9HB90 399 aa11.21□□□□□ -0.61
NUMB-208ENST00000554014 IQCA1LA6NCM1 817 aa11.21□□□□□ -0.62
NUMB-208ENST00000554014 ZFYP08048 801 aaPredicted RBP11.21□□□□□ -0.62
NUMB-208ENST00000554014 POTEIP0CG38 1075 aa11.21□□□□□ -0.62
NUMB-208ENST00000554014 POTEJP0CG39 1038 aa11.21□□□□□ -0.62
NUMB-208ENST00000554014 YY1P25490 414 aa11.21□□□□□ -0.62
NUMB-208ENST00000554014 MMP14P50281 582 aa11.21□□□□□ -0.62
NUMB-208ENST00000554014 RHBDL3P58872 404 aa11.21□□□□□ -0.62
NUMB-208ENST00000554014 NMIQ13287 307 aaPredicted RBP11.21□□□□□ -0.62
NUMB-208ENST00000554014 DLGAP5Q15398 846 aa11.21□□□□□ -0.62
NUMB-208ENST00000554014 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.62
NUMB-208ENST00000554014 APPBP2Q92624 585 aa11.21□□□□□ -0.62
NUMB-208ENST00000554014 PUS7LQ9H0K6 701 aaKnown RBP11.21□□□□□ -0.62
NUMB-208ENST00000554014 AATFQ9NY61 560 aaKnown RBP eCLIP11.21□□□□□ -0.62
NUMB-208ENST00000554014 MBD4O95243 580 aa11.2□□□□□ -0.62
NUMB-208ENST00000554014 CHMLP26374 656 aa11.2□□□□□ -0.62
NUMB-208ENST00000554014 RBM5P52756 815 aaKnown RBP eCLIP11.2□□□□□ -0.62
NUMB-208ENST00000554014 ZSCAN25Q6NSZ9 544 aa11.2□□□□□ -0.62
NUMB-208ENST00000554014 CDC42EP5Q6NZY7 148 aa11.2□□□□□ -0.62
NUMB-208ENST00000554014 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
NUMB-208ENST00000554014 SLF2Q8IX21 1173 aa11.2□□□□□ -0.62
NUMB-208ENST00000554014 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
NUMB-208ENST00000554014 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
NUMB-208ENST00000554014 TDRD3Q9H7E2 651 aaKnown RBP11.2□□□□□ -0.62
NUMB-208ENST00000554014 PAPPA2Q9BXP8 1791 aa11.2□□□□□ -0.62
NUMB-208ENST00000554014 CLRN2A0PK11 232 aa11.19□□□□□ -0.62
NUMB-208ENST00000554014 LDHCP07864 332 aa11.19□□□□□ -0.62
NUMB-208ENST00000554014 VEGFAP15692 232 aaPredicted RBP11.19□□□□□ -0.62
NUMB-208ENST00000554014 CACNB3P54284 484 aa11.19□□□□□ -0.62
NUMB-208ENST00000554014 PPP4CP60510 307 aa11.19□□□□□ -0.62
NUMB-208ENST00000554014 CCDC129Q6ZRS4 1044 aa11.19□□□□□ -0.62
NUMB-208ENST00000554014 USP50Q70EL3 339 aaPredicted RBP11.19□□□□□ -0.62
NUMB-208ENST00000554014 ZNF589Q86UQ0 364 aaPredicted RBP11.19□□□□□ -0.62
NUMB-208ENST00000554014 TICAM2Q86XR7 235 aa11.19□□□□□ -0.62
NUMB-208ENST00000554014 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
NUMB-208ENST00000554014 SCAF8Q9UPN6 1271 aaKnown RBP11.19□□□□□ -0.62
NUMB-208ENST00000554014 MYH8P13535 1937 aa11.19□□□□□ -0.62
NUMB-208ENST00000554014 CNTNAP1P78357 1384 aa11.19□□□□□ -0.62
NUMB-208ENST00000554014 MAGEB6P1A0A0J9YX57 407 aa11.18□□□□□ -0.62
NUMB-208ENST00000554014 FOXP2O15409 715 aa11.18□□□□□ -0.62
NUMB-208ENST00000554014 NFIAQ12857 509 aa11.18□□□□□ -0.62
NUMB-208ENST00000554014 TRPM7Q96QT4 1865 aa11.18□□□□□ -0.62
NUMB-208ENST00000554014 ARMT1Q9H993 441 aa11.18□□□□□ -0.62
NUMB-208ENST00000554014 GGA3Q9NZ52 723 aa11.18□□□□□ -0.62
NUMB-208ENST00000554014 ZNF70Q9UC06 446 aaPredicted RBP11.18□□□□□ -0.62
NUMB-208ENST00000554014 OTOFQ9HC10 1997 aa11.18□□□□□ -0.62
NUMB-208ENST00000554014 KIF3CO14782 793 aa11.18□□□□□ -0.62
NUMB-208ENST00000554014 GPAA1O43292 621 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms