RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 GNAT2P19087 354 aa16.38■□□□□ 0.21
PSMC6-205ENST00000553899 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
PSMC6-205ENST00000553899 RIOK1Q9BRS2 568 aaKnown RBP16.38■□□□□ 0.21
PSMC6-205ENST00000553899 IDI2Q9BXS1 227 aa16.38■□□□□ 0.21
PSMC6-205ENST00000553899 TAOK2Q9UL54 1235 aa16.38■□□□□ 0.21
PSMC6-205ENST00000553899 RAD50Q92878 1312 aa16.38■□□□□ 0.21
PSMC6-205ENST00000553899 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
PSMC6-205ENST00000553899 CHMLP26374 656 aa16.37■□□□□ 0.21
PSMC6-205ENST00000553899 RBM5P52756 815 aaKnown RBP eCLIP16.37■□□□□ 0.21
PSMC6-205ENST00000553899 TNFAIP1Q13829 316 aa16.37■□□□□ 0.21
PSMC6-205ENST00000553899 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
PSMC6-205ENST00000553899 MCMDC2Q4G0Z9 681 aa16.37■□□□□ 0.21
PSMC6-205ENST00000553899 GIMAP6Q6P9H5 292 aa16.37■□□□□ 0.21
PSMC6-205ENST00000553899 SAMD7Q7Z3H4 446 aa16.37■□□□□ 0.21
PSMC6-205ENST00000553899 ADGRA1Q86SQ6 560 aa16.37■□□□□ 0.21
PSMC6-205ENST00000553899 FAM83AQ86UY5 434 aa16.37■□□□□ 0.21
PSMC6-205ENST00000553899 GPBP1L1Q9HC44 474 aaPredicted RBP16.37■□□□□ 0.21
PSMC6-205ENST00000553899 DIAPH3Q9NSV4 1193 aa16.37■□□□□ 0.21
PSMC6-205ENST00000553899 FOCADQ5VW36 1801 aa16.37■□□□□ 0.21
PSMC6-205ENST00000553899 MAGEB6P1A0A0J9YX57 407 aa16.36■□□□□ 0.21
PSMC6-205ENST00000553899 YY1P25490 414 aa16.36■□□□□ 0.21
PSMC6-205ENST00000553899 BTDP43251 543 aa16.36■□□□□ 0.21
PSMC6-205ENST00000553899 HIRAP54198 1017 aaPredicted RBP16.36■□□□□ 0.21
PSMC6-205ENST00000553899 RHBDL3P58872 404 aa16.36■□□□□ 0.21
PSMC6-205ENST00000553899 SKAP1Q86WV1 359 aa16.36■□□□□ 0.21
PSMC6-205ENST00000553899 OSBP2Q969R2 916 aa16.36■□□□□ 0.21
PSMC6-205ENST00000553899 AIDAQ96BJ3 306 aa16.36■□□□□ 0.21
PSMC6-205ENST00000553899 RRAGCQ9HB90 399 aa16.36■□□□□ 0.21
PSMC6-205ENST00000553899 PPP2R3BQ9Y5P8 575 aa16.36■□□□□ 0.21
PSMC6-205ENST00000553899 COL2A1P02458 1487 aaPredicted RBP16.35■□□□□ 0.21
PSMC6-205ENST00000553899 CDC45O75419 566 aa16.35■□□□□ 0.21
PSMC6-205ENST00000553899 NBPF9Q3BBW0 867 aa16.35■□□□□ 0.21
PSMC6-205ENST00000553899 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
PSMC6-205ENST00000553899 CDC42EP5Q6NZY7 148 aa16.35■□□□□ 0.21
PSMC6-205ENST00000553899 LDHDQ86WU2 507 aa16.35■□□□□ 0.21
PSMC6-205ENST00000553899 APOBEC3FQ8IUX4 373 aaKnown RBP16.35■□□□□ 0.21
PSMC6-205ENST00000553899 STRBPQ96SI9 672 aaKnown RBP16.35■□□□□ 0.21
PSMC6-205ENST00000553899 PUS7LQ9H0K6 701 aaKnown RBP16.35■□□□□ 0.21
PSMC6-205ENST00000553899 TMOD2Q9NZR1 351 aa16.35■□□□□ 0.21
PSMC6-205ENST00000553899 CDK5RAP2Q96SN8 1893 aa16.34■□□□□ 0.21
PSMC6-205ENST00000553899 SHTN1A0MZ66 631 aa16.34■□□□□ 0.21
PSMC6-205ENST00000553899 EPB41L2O43491 1005 aaKnown RBP16.34■□□□□ 0.21
PSMC6-205ENST00000553899 ENTPD3O75355 529 aa16.34■□□□□ 0.21
PSMC6-205ENST00000553899 EGFRP00533 1210 aa16.34■□□□□ 0.21
PSMC6-205ENST00000553899 TNNI2P48788 182 aa16.34■□□□□ 0.21
PSMC6-205ENST00000553899 TRPM4Q8TD43 1214 aa16.34■□□□□ 0.21
PSMC6-205ENST00000553899 CRNKL1Q9BZJ0 848 aaKnown RBP16.34■□□□□ 0.21
PSMC6-205ENST00000553899 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
PSMC6-205ENST00000553899 USP40Q9NVE5 1235 aa16.34■□□□□ 0.21
PSMC6-205ENST00000553899 AATFQ9NY61 560 aaKnown RBP eCLIP16.34■□□□□ 0.21
PSMC6-205ENST00000553899 ZNF70Q9UC06 446 aaPredicted RBP16.34■□□□□ 0.21
PSMC6-205ENST00000553899 WDHD1O75717 1129 aaPredicted RBP16.33■□□□□ 0.2
PSMC6-205ENST00000553899 NMIQ13287 307 aaPredicted RBP16.33■□□□□ 0.2
PSMC6-205ENST00000553899 TDRD3Q9H7E2 651 aaKnown RBP16.33■□□□□ 0.2
PSMC6-205ENST00000553899 NMRK2Q9NPI5 230 aa16.33■□□□□ 0.2
PSMC6-205ENST00000553899 MKRN1Q9UHC7 482 aaKnown RBP16.33■□□□□ 0.2
PSMC6-205ENST00000553899 ZMYM6O95789 1325 aa16.33■□□□□ 0.2
PSMC6-205ENST00000553899 SGSM2O43147 1006 aa16.32■□□□□ 0.2
PSMC6-205ENST00000553899 GPAA1O43292 621 aa16.32■□□□□ 0.2
PSMC6-205ENST00000553899 RBM26Q5T8P6 1007 aaKnown RBP16.32■□□□□ 0.2
PSMC6-205ENST00000553899 ATRNL1Q5VV63 1379 aa16.32■□□□□ 0.2
PSMC6-205ENST00000553899 CWC27Q6UX04 472 aaKnown RBP16.32■□□□□ 0.2
PSMC6-205ENST00000553899 MIGA1Q8NAN2 632 aa16.32■□□□□ 0.2
PSMC6-205ENST00000553899 DCPSQ96C86 337 aaKnown RBP16.32■□□□□ 0.2
PSMC6-205ENST00000553899 FAM227BQ96M60 508 aa16.32■□□□□ 0.2
PSMC6-205ENST00000553899 DHX36Q9H2U1 1008 aaKnown RBP16.32■□□□□ 0.2
PSMC6-205ENST00000553899 CCDC171Q6TFL3 1326 aa16.31■□□□□ 0.2
PSMC6-205ENST00000553899 A0A0D9SFI3 127 aa16.31■□□□□ 0.2
PSMC6-205ENST00000553899 PATL2C9JE40 543 aaKnown RBP16.31■□□□□ 0.2
PSMC6-205ENST00000553899 MBD4O95243 580 aa16.31■□□□□ 0.2
PSMC6-205ENST00000553899 ALX1Q15699 326 aa16.31■□□□□ 0.2
PSMC6-205ENST00000553899 CDC37L1Q7L3B6 337 aa16.31■□□□□ 0.2
PSMC6-205ENST00000553899 TEX11Q8IYF3 940 aa16.31■□□□□ 0.2
PSMC6-205ENST00000553899 ZNF784Q8NCA9 323 aaPredicted RBP16.31■□□□□ 0.2
PSMC6-205ENST00000553899 SH3RF3Q8TEJ3 882 aaPredicted RBP16.31■□□□□ 0.2
PSMC6-205ENST00000553899 FAM151AQ8WW52 585 aa16.31■□□□□ 0.2
PSMC6-205ENST00000553899 HOOK2Q96ED9 719 aa16.31■□□□□ 0.2
PSMC6-205ENST00000553899 DDRGK1Q96HY6 314 aa16.31■□□□□ 0.2
PSMC6-205ENST00000553899 POLR2AP24928 1970 aaKnown RBP16.3■□□□□ 0.2
PSMC6-205ENST00000553899 M0R2C6 588 aa16.3■□□□□ 0.2
PSMC6-205ENST00000553899 ANGEL2Q5VTE6 544 aaKnown RBP16.3■□□□□ 0.2
PSMC6-205ENST00000553899 SULF1Q8IWU6 871 aa16.3■□□□□ 0.2
PSMC6-205ENST00000553899 LCORLQ8N3X6 602 aa16.3■□□□□ 0.2
PSMC6-205ENST00000553899 DSCC1Q9BVC3 393 aa16.3■□□□□ 0.2
PSMC6-205ENST00000553899 NACAP1Q9BZK3 213 aa16.3■□□□□ 0.2
PSMC6-205ENST00000553899 GGA3Q9NZ52 723 aa16.3■□□□□ 0.2
PSMC6-205ENST00000553899 PCDHAC2Q9Y5I4 1007 aa16.3■□□□□ 0.2
PSMC6-205ENST00000553899 KIF3CO14782 793 aa16.29■□□□□ 0.2
PSMC6-205ENST00000553899 TOMM70O94826 608 aa16.29■□□□□ 0.2
PSMC6-205ENST00000553899 CHGBP05060 677 aa16.29■□□□□ 0.2
PSMC6-205ENST00000553899 DYNLL1P63167 89 aaKnown RBP16.29■□□□□ 0.2
PSMC6-205ENST00000553899 SEC62Q99442 399 aaKnown RBP16.29■□□□□ 0.2
PSMC6-205ENST00000553899 ESYT1Q9BSJ8 1104 aa16.29■□□□□ 0.2
PSMC6-205ENST00000553899 DEFB129Q9H1M3 183 aa16.29■□□□□ 0.2
PSMC6-205ENST00000553899 ARMT1Q9H993 441 aa16.29■□□□□ 0.2
PSMC6-205ENST00000553899 DCP1AQ9NPI6 582 aaPredicted RBP16.29■□□□□ 0.2
PSMC6-205ENST00000553899 FAM198AQ9UFP1 575 aa16.29■□□□□ 0.2
PSMC6-205ENST00000553899 CNTNAP1P78357 1384 aa16.28■□□□□ 0.2
PSMC6-205ENST00000553899 FLT1P17948 1338 aa16.28■□□□□ 0.2
PSMC6-205ENST00000553899 GSG1L2A8MUP6 293 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms