RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 APOBEC3HQ6NTF7 200 aaKnown RBP12.28□□□□□ -0.44
CHD8-205ENST00000553651 DEFB123Q8N688 67 aa12.28□□□□□ -0.44
CHD8-205ENST00000553651 DNAAF4Q8WXU2 420 aa12.28□□□□□ -0.44
CHD8-205ENST00000553651 MYH16Q9H6N6 1097 aa12.28□□□□□ -0.44
CHD8-205ENST00000553651 PAK6Q9NQU5 681 aaPredicted RBP12.28□□□□□ -0.44
CHD8-205ENST00000553651 MTMR10Q9NXD2 777 aa12.28□□□□□ -0.44
CHD8-205ENST00000553651 ZNF112Q9UJU3 913 aa12.28□□□□□ -0.44
CHD8-205ENST00000553651 VCANP13611 3396 aa12.27□□□□□ -0.44
CHD8-205ENST00000553651 DOCK3Q8IZD9 2030 aa12.27□□□□□ -0.44
CHD8-205ENST00000553651 PLIN1O60240 522 aa12.27□□□□□ -0.45
CHD8-205ENST00000553651 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
CHD8-205ENST00000553651 HIBADHP31937 336 aaKnown RBP12.27□□□□□ -0.45
CHD8-205ENST00000553651 FLIIQ13045 1269 aa12.27□□□□□ -0.45
CHD8-205ENST00000553651 UBE4AQ14139 1066 aa12.27□□□□□ -0.45
CHD8-205ENST00000553651 LRIT3Q3SXY7 679 aa12.27□□□□□ -0.45
CHD8-205ENST00000553651 LMBR1LQ6UX01 489 aa12.27□□□□□ -0.45
CHD8-205ENST00000553651 LDHAL6AQ6ZMR3 332 aa12.27□□□□□ -0.45
CHD8-205ENST00000553651 DIS3LQ8TF46 1054 aaKnown RBP12.27□□□□□ -0.45
CHD8-205ENST00000553651 TSR2Q969E8 191 aaKnown RBP12.27□□□□□ -0.45
CHD8-205ENST00000553651 ZDHHC15Q96MV8 337 aa12.27□□□□□ -0.45
CHD8-205ENST00000553651 STK31Q9BXU1 1019 aa12.27□□□□□ -0.45
CHD8-205ENST00000553651 BIN2Q9UBW5 565 aaPredicted RBP12.27□□□□□ -0.45
CHD8-205ENST00000553651 ADCY3O60266 1144 aa12.26□□□□□ -0.45
CHD8-205ENST00000553651 INHAP05111 366 aa12.26□□□□□ -0.45
CHD8-205ENST00000553651 CYP2C8P10632 490 aa12.26□□□□□ -0.45
CHD8-205ENST00000553651 ELNP15502 786 aa12.26□□□□□ -0.45
CHD8-205ENST00000553651 MIGA2Q7L4E1 593 aa12.26□□□□□ -0.45
CHD8-205ENST00000553651 FBXO33Q7Z6M2 555 aa12.26□□□□□ -0.45
CHD8-205ENST00000553651 PAWRQ96IZ0 340 aaKnown RBP12.26□□□□□ -0.45
CHD8-205ENST00000553651 DEFB118Q96PH6 123 aa12.26□□□□□ -0.45
CHD8-205ENST00000553651 MRIQ9BWK5 157 aa12.26□□□□□ -0.45
CHD8-205ENST00000553651 CAPN2P17655 700 aa12.25□□□□□ -0.45
CHD8-205ENST00000553651 FLT3LGP49771 235 aa12.25□□□□□ -0.45
CHD8-205ENST00000553651 BCAMP50895 628 aa12.25□□□□□ -0.45
CHD8-205ENST00000553651 FCGRTP55899 365 aa12.25□□□□□ -0.45
CHD8-205ENST00000553651 IRF5Q13568 498 aa12.25□□□□□ -0.45
CHD8-205ENST00000553651 NOL9Q5SY16 702 aaKnown RBP12.25□□□□□ -0.45
CHD8-205ENST00000553651 PXYLP1Q8TE99 480 aa12.25□□□□□ -0.45
CHD8-205ENST00000553651 ZNF341Q9BYN7 854 aa12.25□□□□□ -0.45
CHD8-205ENST00000553651 PUS3Q9BZE2 481 aaKnown RBP12.25□□□□□ -0.45
CHD8-205ENST00000553651 SPTBN5Q9NRC6 3674 aaKnown RBP12.25□□□□□ -0.45
CHD8-205ENST00000553651 EYSQ5T1H1 3165 aa12.24□□□□□ -0.45
CHD8-205ENST00000553651 TFRCP02786 760 aaKnown RBP12.24□□□□□ -0.45
CHD8-205ENST00000553651 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
CHD8-205ENST00000553651 BEND3Q5T5X7 828 aa12.24□□□□□ -0.45
CHD8-205ENST00000553651 DCAF15Q66K64 600 aa12.24□□□□□ -0.45
CHD8-205ENST00000553651 TEKT1Q969V4 418 aa12.24□□□□□ -0.45
CHD8-205ENST00000553651 HOOK2Q96ED9 719 aa12.24□□□□□ -0.45
CHD8-205ENST00000553651 PARK7Q99497 189 aaKnown RBP12.24□□□□□ -0.45
CHD8-205ENST00000553651 CNNM1Q9NRU3 951 aa12.24□□□□□ -0.45
CHD8-205ENST00000553651 ZMYND8Q9ULU4 1186 aaPredicted RBP12.24□□□□□ -0.45
CHD8-205ENST00000553651 IQSEC3Q9UPP2 1182 aaPredicted RBP12.24□□□□□ -0.45
CHD8-205ENST00000553651 CHMP3Q9Y3E7 222 aa12.24□□□□□ -0.45
CHD8-205ENST00000553651 TTC28Q96AY4 2481 aa12.23□□□□□ -0.45
CHD8-205ENST00000553651 CACNA1FO60840 1977 aa12.23□□□□□ -0.45
CHD8-205ENST00000553651 PRUNE2Q8WUY3 3088 aa12.23□□□□□ -0.45
CHD8-205ENST00000553651 ATRNL1Q5VV63 1379 aa12.23□□□□□ -0.45
CHD8-205ENST00000553651 FKBP5Q13451 457 aaPredicted RBP12.23□□□□□ -0.45
CHD8-205ENST00000553651 CCDC57Q2TAC2 916 aa12.23□□□□□ -0.45
CHD8-205ENST00000553651 PTPRFP10586 1907 aa12.23□□□□□ -0.45
CHD8-205ENST00000553651 A0A0G2JLL6 359 aaPredicted RBP12.22□□□□□ -0.45
CHD8-205ENST00000553651 CXCL11O14625 94 aa12.22□□□□□ -0.45
CHD8-205ENST00000553651 MAGEA10P43363 369 aaPredicted RBP12.22□□□□□ -0.45
CHD8-205ENST00000553651 CHAF1AQ13111 956 aaPredicted RBP12.22□□□□□ -0.45
CHD8-205ENST00000553651 HHIPL2Q6UWX4 724 aa12.22□□□□□ -0.45
CHD8-205ENST00000553651 NECAB2Q7Z6G3 386 aa12.22□□□□□ -0.45
CHD8-205ENST00000553651 PRRT2Q7Z6L0 340 aaPredicted RBP12.22□□□□□ -0.45
CHD8-205ENST00000553651 C7orf61Q8IZ16 206 aa12.22□□□□□ -0.45
CHD8-205ENST00000553651 TBC1D22AQ8WUA7 517 aa12.22□□□□□ -0.45
CHD8-205ENST00000553651 FAM151AQ8WW52 585 aa12.22□□□□□ -0.45
CHD8-205ENST00000553651 KAZALD1Q96I82 304 aa12.22□□□□□ -0.45
CHD8-205ENST00000553651 COL2A1P02458 1487 aaPredicted RBP12.21□□□□□ -0.45
CHD8-205ENST00000553651 PHF20L1A8MW92 1017 aa12.21□□□□□ -0.45
CHD8-205ENST00000553651 F6X3S4 739 aa12.21□□□□□ -0.45
CHD8-205ENST00000553651 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHD8-205ENST00000553651 TDHQ8IZJ6 230 aa12.21□□□□□ -0.45
CHD8-205ENST00000553651 VGLL2Q8N8G2 317 aa12.21□□□□□ -0.45
CHD8-205ENST00000553651 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHD8-205ENST00000553651 TMOD2Q9NZR1 351 aa12.21□□□□□ -0.45
CHD8-205ENST00000553651 PHIPQ8WWQ0 1821 aa12.21□□□□□ -0.46
CHD8-205ENST00000553651 DDX60LQ5H9U9 1706 aaKnown RBP12.2□□□□□ -0.46
CHD8-205ENST00000553651 GRM8O00222 908 aa12.2□□□□□ -0.46
CHD8-205ENST00000553651 SYN1P17600 705 aa12.2□□□□□ -0.46
CHD8-205ENST00000553651 NFIAQ12857 509 aa12.2□□□□□ -0.46
CHD8-205ENST00000553651 TAF7LQ5H9L4 462 aa12.2□□□□□ -0.46
CHD8-205ENST00000553651 ANKLE1Q8NAG6 615 aa12.2□□□□□ -0.46
CHD8-205ENST00000553651 GUCD1Q96NT3 240 aa12.2□□□□□ -0.46
CHD8-205ENST00000553651 FAM198AQ9UFP1 575 aa12.2□□□□□ -0.46
CHD8-205ENST00000553651 SLC45A1Q9Y2W3 748 aa12.2□□□□□ -0.46
CHD8-205ENST00000553651 SUGT1Q9Y2Z0 365 aa12.2□□□□□ -0.46
CHD8-205ENST00000553651 DNAH12Q6ZR08 3092 aa12.19□□□□□ -0.46
CHD8-205ENST00000553651 POTEB2H3BUK9 544 aa12.19□□□□□ -0.46
CHD8-205ENST00000553651 TNPO2O14787 897 aaKnown RBP12.19□□□□□ -0.46
CHD8-205ENST00000553651 CDC42EP5Q6NZY7 148 aa12.19□□□□□ -0.46
CHD8-205ENST00000553651 ZFPM1Q8IX07 1006 aa12.19□□□□□ -0.46
CHD8-205ENST00000553651 AFG3L2Q9Y4W6 797 aa12.19□□□□□ -0.46
CHD8-205ENST00000553651 PFASO15067 1338 aa12.18□□□□□ -0.46
CHD8-205ENST00000553651 MAST3O60307 1309 aa12.18□□□□□ -0.46
CHD8-205ENST00000553651 MROH5Q6ZUA9 1318 aa12.18□□□□□ -0.46
CHD8-205ENST00000553651 VAMP4O75379 141 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms