RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 VPS53Q5VIR6 699 aa11.69□□□□□ -0.54
CHD8-204ENST00000553622 MICALL2Q8IY33 904 aa11.69□□□□□ -0.54
CHD8-204ENST00000553622 SH3RF3Q8TEJ3 882 aaPredicted RBP11.69□□□□□ -0.54
CHD8-204ENST00000553622 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
CHD8-204ENST00000553622 CRNKL1Q9BZJ0 848 aaKnown RBP11.69□□□□□ -0.54
CHD8-204ENST00000553622 PCDHAC2Q9Y5I4 1007 aa11.69□□□□□ -0.54
CHD8-204ENST00000553622 GAKO14976 1311 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 PRKAB2O43741 272 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 DDNO94850 711 aaPredicted RBP11.68□□□□□ -0.54
CHD8-204ENST00000553622 HSPD1P10809 573 aaKnown RBP11.68□□□□□ -0.54
CHD8-204ENST00000553622 GNAT2P19087 354 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 MCCP23508 829 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 TDO2P48775 406 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 DLGAP5Q15398 846 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 HHIPL2Q6UWX4 724 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 TEX11Q8IYF3 940 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 GPC2Q8N158 579 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 GMLQ99445 158 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 LSG1Q9H089 658 aaKnown RBP11.68□□□□□ -0.54
CHD8-204ENST00000553622 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 CNOT7Q9UIV1 285 aaKnown RBP11.68□□□□□ -0.54
CHD8-204ENST00000553622 SERPINA10Q9UK55 444 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 SRCAPQ6ZRS2 3230 aa11.68□□□□□ -0.54
CHD8-204ENST00000553622 H7C1D1 291 aa11.67□□□□□ -0.54
CHD8-204ENST00000553622 LMOD1P29536 600 aaPredicted RBP11.67□□□□□ -0.54
CHD8-204ENST00000553622 HDLBPQ00341 1268 aaKnown RBP11.67□□□□□ -0.54
CHD8-204ENST00000553622 TGFBRAP1Q8WUH2 860 aa11.67□□□□□ -0.54
CHD8-204ENST00000553622 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
CHD8-204ENST00000553622 ZDHHC15Q96MV8 337 aa11.67□□□□□ -0.54
CHD8-204ENST00000553622 RIOK1Q9BRS2 568 aaKnown RBP11.67□□□□□ -0.54
CHD8-204ENST00000553622 USP26Q9BXU7 913 aa11.67□□□□□ -0.54
CHD8-204ENST00000553622 C22orf23Q9BZE7 217 aa11.67□□□□□ -0.54
CHD8-204ENST00000553622 NACAP1Q9BZK3 213 aa11.67□□□□□ -0.54
CHD8-204ENST00000553622 RBM8AQ9Y5S9 174 aaKnown RBP11.67□□□□□ -0.54
CHD8-204ENST00000553622 U3KPZ7 1027 aaPredicted RBP11.67□□□□□ -0.54
CHD8-204ENST00000553622 SCN4AP35499 1836 aa11.67□□□□□ -0.54
CHD8-204ENST00000553622 PATL2C9JE40 543 aaKnown RBP11.66□□□□□ -0.54
CHD8-204ENST00000553622 PPP4CP60510 307 aa11.66□□□□□ -0.54
CHD8-204ENST00000553622 PICALMQ13492 652 aa11.66□□□□□ -0.54
CHD8-204ENST00000553622 SLC4A8Q2Y0W8 1093 aa11.66□□□□□ -0.54
CHD8-204ENST00000553622 TBC1D10BQ4KMP7 808 aaPredicted RBP11.66□□□□□ -0.54
CHD8-204ENST00000553622 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
CHD8-204ENST00000553622 CERS3Q8IU89 383 aa11.66□□□□□ -0.54
CHD8-204ENST00000553622 MAPKAPK5Q8IW41 473 aa11.66□□□□□ -0.54
CHD8-204ENST00000553622 DSCC1Q9BVC3 393 aa11.66□□□□□ -0.54
CHD8-204ENST00000553622 NAPBQ9H115 298 aa11.66□□□□□ -0.54
CHD8-204ENST00000553622 TDRD3Q9H7E2 651 aaKnown RBP11.66□□□□□ -0.54
CHD8-204ENST00000553622 MYOZ2Q9NPC6 264 aa11.66□□□□□ -0.54
CHD8-204ENST00000553622 TMOD2Q9NZR1 351 aa11.66□□□□□ -0.54
CHD8-204ENST00000553622 CLRN2A0PK11 232 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 GSG1L2A8MUP6 293 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 MYO1BO43795 1136 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 CACNB3P54284 484 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 HAND2P61296 217 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 KIF4BQ2VIQ3 1234 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 APOBEC3HQ6NTF7 200 aaKnown RBP11.65□□□□□ -0.54
CHD8-204ENST00000553622 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 IFNL3Q8IZI9 196 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 DPF2Q92785 391 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 MAP4K1Q92918 833 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 PRMT6Q96LA8 375 aaPredicted RBP11.65□□□□□ -0.54
CHD8-204ENST00000553622 MRIQ9BWK5 157 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 VEZTQ9HBM0 779 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 GPRC5DQ9NZD1 345 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 SAP30BPQ9UHR5 308 aaKnown RBP11.65□□□□□ -0.54
CHD8-204ENST00000553622 CTNNA3Q9UI47 895 aa11.65□□□□□ -0.54
CHD8-204ENST00000553622 ZC3H4Q9UPT8 1303 aaKnown RBP11.64□□□□□ -0.55
CHD8-204ENST00000553622 DDX60LQ5H9U9 1706 aaKnown RBP11.64□□□□□ -0.55
CHD8-204ENST00000553622 SPDYE2BA6NHP3 402 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 MINDY4BA8MYZ0 360 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 FGAP02671 866 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 SPDYE6P0CI01 402 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 EPS15P42566 896 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 RHBDL3P58872 404 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 ZNF280AP59817 542 aaPredicted RBP11.64□□□□□ -0.55
CHD8-204ENST00000553622 TCP10Q12799 353 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 RNF20Q5VTR2 975 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 AMOTL1Q8IY63 956 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 STK11IPQ8N1F8 1099 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 EPB41L4AQ9HCS5 686 aaPredicted RBP11.64□□□□□ -0.55
CHD8-204ENST00000553622 MCM9Q9NXL9 1143 aa11.64□□□□□ -0.55
CHD8-204ENST00000553622 RPAP1Q9BWH6 1393 aaPredicted RBP11.64□□□□□ -0.55
CHD8-204ENST00000553622 GLTPD2A6NH11 291 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 TCP10L2B9ZVM9 353 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 SLC27A2O14975 620 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 FOXP2O15409 715 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 EGFRP00533 1210 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 POLR3DP05423 398 aaPredicted RBP11.63□□□□□ -0.55
CHD8-204ENST00000553622 HSPA4P34932 840 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 IMMTQ16891 758 aaKnown RBP11.63□□□□□ -0.55
CHD8-204ENST00000553622 NBPF9Q3BBW0 867 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 CREB3L3Q68CJ9 461 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 TBC1D32Q96NH3 1257 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 DCP1AQ9NPI6 582 aaPredicted RBP11.63□□□□□ -0.55
CHD8-204ENST00000553622 ATP8A2Q9NTI2 1148 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 ZNF70Q9UC06 446 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms