RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 EGFRP00533 1210 aa12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 NUCB1Q02818 461 aa12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 FAM151AQ8WW52 585 aa12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 CDCA5Q96FF9 252 aa12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 DNAJC2Q99543 621 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 IDI2Q9BXS1 227 aa12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 DHX36Q9H2U1 1008 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 TDRD3Q9H7E2 651 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 SNRKQ9NRH2 765 aa12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 STAP2Q9UGK3 403 aa12.42□□□□□ -0.42
TRAFD1-208ENST00000552890 GOLIM4O00461 696 aa12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 RASA3Q14644 834 aa12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 UBE3CQ15386 1083 aa12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 DEFB115Q30KQ5 88 aa12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 SLC9C2Q5TAH2 1124 aa12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 CENPQQ7L2Z9 268 aaPredicted RBP12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 AMOTL1Q8IY63 956 aa12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 TLR7Q9NYK1 1049 aaKnown RBP12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 TLL2Q9Y6L7 1015 aa12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 ECM29Q5VYK3 1845 aa12.41□□□□□ -0.42
TRAFD1-208ENST00000552890 TRPM7Q96QT4 1865 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 ZNF646O15015 1829 aaPredicted RBP12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 CLRN2A0PK11 232 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 RASSF10A6NK89 507 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 HIP1O00291 1037 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 SMARCA5O60264 1052 aaPredicted RBP12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 CYP7A1P22680 504 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 BTDP43251 543 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 DIXDC1Q155Q3 683 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 CDC42EP5Q6NZY7 148 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 KBTBD3Q8NAB2 608 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 EVI5LQ96CN4 794 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 CRNKL1Q9BZJ0 848 aaKnown RBP12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 BCL11AQ9H165 835 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 OSBPL3Q9H4L5 887 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 ZNF408Q9H9D4 720 aa12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.4□□□□□ -0.42
TRAFD1-208ENST00000552890 GNAT2P19087 354 aa12.39□□□□□ -0.43
TRAFD1-208ENST00000552890 MFAP1P55081 439 aaKnown RBP12.39□□□□□ -0.43
TRAFD1-208ENST00000552890 TBC1D9Q6ZT07 1266 aa12.39□□□□□ -0.43
TRAFD1-208ENST00000552890 SAPCD2Q86UD0 394 aa12.39□□□□□ -0.43
TRAFD1-208ENST00000552890 TEX11Q8IYF3 940 aa12.39□□□□□ -0.43
TRAFD1-208ENST00000552890 MAGEB6Q8N7X4 407 aa12.39□□□□□ -0.43
TRAFD1-208ENST00000552890 TRIM34Q9BYJ4 488 aa12.39□□□□□ -0.43
TRAFD1-208ENST00000552890 MYH2Q9UKX2 1941 aa12.39□□□□□ -0.43
TRAFD1-208ENST00000552890 MAGEB6P1A0A0J9YX57 407 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 TCP10L2B9ZVM9 353 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 ADM5C9JUS6 153 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 MAP2K2P36507 400 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 PDE1AP54750 535 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 HUNKP57058 714 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 NOGQ13253 232 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 MAP3K11Q16584 847 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 PI16Q6UXB8 463 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 ZSCAN29Q8IWY8 852 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 ANKRD13AQ8IZ07 590 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 GINM1Q9NU53 330 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 CSADQ9Y600 493 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 AKAP11Q9UKA4 1901 aa12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 COL2A1P02458 1487 aaPredicted RBP12.38□□□□□ -0.43
TRAFD1-208ENST00000552890 TRAF5O00463 557 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 PDE6AP16499 860 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 INHBEP58166 350 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 MAP2K1Q02750 393 aaPredicted RBP12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 GRIK5Q16478 980 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 CST9Q5W186 159 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 B4GALNT3Q6L9W6 998 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 RGMBQ6NW40 437 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 TTC6Q86TZ1 520 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 AIDAQ96BJ3 306 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 SLC10A4Q96EP9 437 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 BEGAINQ9BUH8 593 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 LNPKQ9C0E8 428 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 PIH1D3Q9NQM4 214 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 ATP8A2Q9NTI2 1148 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 PI4KBQ9UBF8 816 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 HERC5Q9UII4 1024 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 RFX7Q2KHR2 1363 aa12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 POLR2AP24928 1970 aaKnown RBP12.37□□□□□ -0.43
TRAFD1-208ENST00000552890 MAST2Q6P0Q8 1798 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 PAPPA2Q9BXP8 1791 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 CNTNAP1P78357 1384 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 CA12O43570 354 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 TBC1D12O60347 775 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 WDHD1O75717 1129 aaPredicted RBP12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 IGHDP01880 384 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 ADD2P35612 726 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 USP5P45974 858 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 RGS3P49796 1198 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 IRX6P78412 446 aaPredicted RBP12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 GIMAP6Q6P9H5 292 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 FOXP4Q8IVH2 680 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms