RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 GIMAP6Q6P9H5 292 aa11.7□□□□□ -0.54
TMEM116-216ENST00000552800 BLOC1S2Q6QNY1 142 aa11.7□□□□□ -0.54
TMEM116-216ENST00000552800 DHX32Q7L7V1 743 aaKnown RBP11.7□□□□□ -0.54
TMEM116-216ENST00000552800 CCDC125Q86Z20 511 aa11.7□□□□□ -0.54
TMEM116-216ENST00000552800 TDRD7Q8NHU6 1098 aaKnown RBP11.7□□□□□ -0.54
TMEM116-216ENST00000552800 TFCP2L1Q9NZI6 479 aa11.7□□□□□ -0.54
TMEM116-216ENST00000552800 ANKRD31Q8N7Z5 1873 aa11.7□□□□□ -0.54
TMEM116-216ENST00000552800 SNAP23O00161 211 aa11.69□□□□□ -0.54
TMEM116-216ENST00000552800 GPAA1O43292 621 aa11.69□□□□□ -0.54
TMEM116-216ENST00000552800 CHGBP05060 677 aa11.69□□□□□ -0.54
TMEM116-216ENST00000552800 SRGNP10124 158 aa11.69□□□□□ -0.54
TMEM116-216ENST00000552800 CASTP20810 708 aaKnown RBP11.69□□□□□ -0.54
TMEM116-216ENST00000552800 ALDH1B1P30837 517 aa11.69□□□□□ -0.54
TMEM116-216ENST00000552800 SLC15A2Q16348 729 aa11.69□□□□□ -0.54
TMEM116-216ENST00000552800 PI16Q6UXB8 463 aa11.69□□□□□ -0.54
TMEM116-216ENST00000552800 CHMP4CQ96CF2 233 aa11.69□□□□□ -0.54
TMEM116-216ENST00000552800 JAKMIP1Q96N16 626 aaKnown RBP11.69□□□□□ -0.54
TMEM116-216ENST00000552800 UPF3BQ9BZI7 483 aaKnown RBP11.69□□□□□ -0.54
TMEM116-216ENST00000552800 PDRG1Q9NUG6 133 aa11.69□□□□□ -0.54
TMEM116-216ENST00000552800 CACNA1SQ13698 1873 aa11.69□□□□□ -0.54
TMEM116-216ENST00000552800 ZNF532Q9HCE3 1301 aa11.68□□□□□ -0.54
TMEM116-216ENST00000552800 FGRP09769 529 aa11.68□□□□□ -0.54
TMEM116-216ENST00000552800 IL1R1P14778 569 aa11.68□□□□□ -0.54
TMEM116-216ENST00000552800 NPR1P16066 1061 aa11.68□□□□□ -0.54
TMEM116-216ENST00000552800 PDE6BP35913 854 aa11.68□□□□□ -0.54
TMEM116-216ENST00000552800 TOB2Q14106 344 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-216ENST00000552800 E2F4Q16254 413 aa11.68□□□□□ -0.54
TMEM116-216ENST00000552800 SLC16A10Q8TF71 515 aa11.68□□□□□ -0.54
TMEM116-216ENST00000552800 ANAPC4Q9UJX5 808 aa11.68□□□□□ -0.54
TMEM116-216ENST00000552800 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-216ENST00000552800 LAMA4Q16363 1823 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 E7EWF7 191 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 PTMSP20962 102 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 KCNJ4P48050 445 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 CCDC129Q6ZRS4 1044 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 CERS3Q8IU89 383 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 ZGPATQ8N5A5 531 aaKnown RBP11.67□□□□□ -0.54
TMEM116-216ENST00000552800 WDR66Q8TBY9 1149 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
TMEM116-216ENST00000552800 ZNF274Q96GC6 653 aaPredicted RBP11.67□□□□□ -0.54
TMEM116-216ENST00000552800 SLKQ9H2G2 1235 aaPredicted RBP11.67□□□□□ -0.54
TMEM116-216ENST00000552800 WWC3Q9ULE0 1092 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 SUGT1Q9Y2Z0 365 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 ATP6V0A2Q9Y487 856 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 DUOX1Q9NRD9 1551 aa11.67□□□□□ -0.54
TMEM116-216ENST00000552800 GSG1L2A8MUP6 293 aa11.66□□□□□ -0.54
TMEM116-216ENST00000552800 BRD1O95696 1058 aa11.66□□□□□ -0.54
TMEM116-216ENST00000552800 PCP11498 1178 aaKnown RBP11.66□□□□□ -0.54
TMEM116-216ENST00000552800 MCM4P33991 863 aa11.66□□□□□ -0.54
TMEM116-216ENST00000552800 GYG1P46976 350 aa11.66□□□□□ -0.54
TMEM116-216ENST00000552800 PPP4CP60510 307 aa11.66□□□□□ -0.54
TMEM116-216ENST00000552800 IMMTQ16891 758 aaKnown RBP11.66□□□□□ -0.54
TMEM116-216ENST00000552800 WASHC4Q2M389 1173 aa11.66□□□□□ -0.54
TMEM116-216ENST00000552800 SLFNL1Q499Z3 407 aa11.66□□□□□ -0.54
TMEM116-216ENST00000552800 GRIPAP1Q4V328 841 aa11.66□□□□□ -0.54
TMEM116-216ENST00000552800 SPTY2D1Q68D10 685 aaPredicted RBP11.66□□□□□ -0.54
TMEM116-216ENST00000552800 STOX1Q6ZVD7 989 aa11.66□□□□□ -0.54
TMEM116-216ENST00000552800 NSUN4Q96CB9 384 aaKnown RBP11.66□□□□□ -0.54
TMEM116-216ENST00000552800 RIOK1Q9BRS2 568 aaKnown RBP11.66□□□□□ -0.54
TMEM116-216ENST00000552800 LLPHQ9BRT6 129 aaKnown RBP11.66□□□□□ -0.54
TMEM116-216ENST00000552800 TAF6LQ9Y6J9 622 aa11.66□□□□□ -0.54
TMEM116-216ENST00000552800 FAM205AQ6ZU69 1335 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 COL1A1P02452 1464 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-216ENST00000552800 WTIPA6NIX2 430 aaPredicted RBP11.65□□□□□ -0.54
TMEM116-216ENST00000552800 ZNF213O14771 459 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 IDH1O75874 414 aaKnown RBP11.65□□□□□ -0.54
TMEM116-216ENST00000552800 ME3Q16798 604 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 IFNL3Q8IZI9 196 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 MAGEB6Q8N7X4 407 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 KCNV2Q8TDN2 545 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 ZNF384Q8TF68 577 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 TNPO1Q92973 898 aaKnown RBP11.65□□□□□ -0.54
TMEM116-216ENST00000552800 MASTLQ96GX5 879 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 MRIQ9BWK5 157 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 ZDHHC9Q9Y397 364 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 CCDC88AQ3V6T2 1871 aa11.65□□□□□ -0.54
TMEM116-216ENST00000552800 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
TMEM116-216ENST00000552800 CC2D2BQ6DHV5 1058 aa11.64□□□□□ -0.55
TMEM116-216ENST00000552800 TXNRD3Q86VQ6 643 aa11.64□□□□□ -0.55
TMEM116-216ENST00000552800 MB21D2Q8IYB1 491 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-216ENST00000552800 RTFDC1Q9BY42 306 aaPredicted RBP11.64□□□□□ -0.55
TMEM116-216ENST00000552800 TPCN1Q9ULQ1 816 aa11.64□□□□□ -0.55
TMEM116-216ENST00000552800 PARP3Q9Y6F1 533 aa11.64□□□□□ -0.55
TMEM116-216ENST00000552800 MYH13Q9UKX3 1938 aa11.64□□□□□ -0.55
TMEM116-216ENST00000552800 PFKFB2O60825 505 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 MMP10P09238 476 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 FKBP1AP62942 108 aaKnown RBP11.63□□□□□ -0.55
TMEM116-216ENST00000552800 GPSM2P81274 684 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 ST3GAL1Q11201 340 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 CAMK2BQ13554 666 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 COL9A3Q14050 684 aaPredicted RBP11.63□□□□□ -0.55
TMEM116-216ENST00000552800 EZH2Q15910 746 aaKnown RBP11.63□□□□□ -0.55
TMEM116-216ENST00000552800 SBK1Q52WX2 424 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 VPS37DQ86XT2 251 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 NCOA7Q8NI08 942 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 SMARCC2Q8TAQ2 1214 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 TBC1D16Q8TBP0 767 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 C7orf43Q8WVR3 580 aa11.63□□□□□ -0.55
TMEM116-216ENST00000552800 AIDAQ96BJ3 306 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms