RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 OLFM4Q6UX06 510 aa16.87■□□□□ 0.29
LETMD1-229ENST00000551261 RALYLQ86SE5 291 aaKnown RBP16.87■□□□□ 0.29
LETMD1-229ENST00000551261 ADGRA1Q86SQ6 560 aa16.87■□□□□ 0.29
LETMD1-229ENST00000551261 AMOTL1Q8IY63 956 aa16.87■□□□□ 0.29
LETMD1-229ENST00000551261 ZNF384Q8TF68 577 aa16.87■□□□□ 0.29
LETMD1-229ENST00000551261 MTA3Q9BTC8 594 aa16.87■□□□□ 0.29
LETMD1-229ENST00000551261 UPF3BQ9BZI7 483 aaKnown RBP16.87■□□□□ 0.29
LETMD1-229ENST00000551261 LAMB1P07942 1786 aa16.87■□□□□ 0.29
LETMD1-229ENST00000551261 FER1L6Q2WGJ9 1857 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 GPR75-ASB3A0A0A6YYF3 556 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 PSDA5PKW4 1024 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-229ENST00000551261 USP17L3A6NCW0 530 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 USP17L4A6NCW7 530 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 E7EWF7 191 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 ADCK5Q3MIX3 580 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 DHX32Q7L7V1 743 aaKnown RBP16.86■□□□□ 0.29
LETMD1-229ENST00000551261 USP17L1Q7RTZ2 530 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 MIGA1Q8NAN2 632 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 NCOA7Q8NI08 942 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 INTS4Q96HW7 963 aaKnown RBP16.86■□□□□ 0.29
LETMD1-229ENST00000551261 ANAPC4Q9UJX5 808 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 TAOK2Q9UL54 1235 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-229ENST00000551261 LIMCH1Q9UPQ0 1083 aa16.86■□□□□ 0.29
LETMD1-229ENST00000551261 ZNF646O15015 1829 aaPredicted RBP16.85■□□□□ 0.29
LETMD1-229ENST00000551261 SLC3A2P08195 630 aaKnown RBP16.85■□□□□ 0.29
LETMD1-229ENST00000551261 AOC3Q16853 763 aa16.85■□□□□ 0.29
LETMD1-229ENST00000551261 HHIPL2Q6UWX4 724 aa16.85■□□□□ 0.29
LETMD1-229ENST00000551261 KRT23Q9C075 422 aa16.85■□□□□ 0.29
LETMD1-229ENST00000551261 TAOK3Q9H2K8 898 aa16.85■□□□□ 0.29
LETMD1-229ENST00000551261 CWC22Q9HCG8 908 aaKnown RBP16.85■□□□□ 0.29
LETMD1-229ENST00000551261 EPB41L4AQ9HCS5 686 aaPredicted RBP16.85■□□□□ 0.29
LETMD1-229ENST00000551261 MYH2Q9UKX2 1941 aa16.85■□□□□ 0.29
LETMD1-229ENST00000551261 CD2BP2O95400 341 aaKnown RBP16.84■□□□□ 0.29
LETMD1-229ENST00000551261 SBK1Q52WX2 424 aa16.84■□□□□ 0.29
LETMD1-229ENST00000551261 STAG1Q8WVM7 1258 aa16.84■□□□□ 0.29
LETMD1-229ENST00000551261 AATFQ9NY61 560 aaKnown RBP eCLIP16.84■□□□□ 0.29
LETMD1-229ENST00000551261 CHD4Q14839 1912 aa16.84■□□□□ 0.29
LETMD1-229ENST00000551261 PDIA4P13667 645 aaKnown RBP16.83■□□□□ 0.28
LETMD1-229ENST00000551261 MCM5P33992 734 aa16.83■□□□□ 0.28
LETMD1-229ENST00000551261 AK2P54819 239 aa16.83■□□□□ 0.28
LETMD1-229ENST00000551261 CUL4AQ13619 759 aa16.83■□□□□ 0.28
LETMD1-229ENST00000551261 DOK7Q18PE1 504 aa16.83■□□□□ 0.28
LETMD1-229ENST00000551261 DACT2Q5SW24 774 aa16.83■□□□□ 0.28
LETMD1-229ENST00000551261 NIM1KQ8IY84 436 aa16.83■□□□□ 0.28
LETMD1-229ENST00000551261 LARGE2Q8N3Y3 721 aa16.83■□□□□ 0.28
LETMD1-229ENST00000551261 TEKT1Q969V4 418 aa16.83■□□□□ 0.28
LETMD1-229ENST00000551261 AGXT2Q9BYV1 514 aa16.83■□□□□ 0.28
LETMD1-229ENST00000551261 DBNDD1Q9H9R9 158 aa16.83■□□□□ 0.28
LETMD1-229ENST00000551261 ZNF219Q9P2Y4 722 aaPredicted RBP16.83■□□□□ 0.28
LETMD1-229ENST00000551261 NAV1Q8NEY1 1877 aa16.82■□□□□ 0.28
LETMD1-229ENST00000551261 ROBO3Q96MS0 1386 aa16.82■□□□□ 0.28
LETMD1-229ENST00000551261 IARSP41252 1262 aaKnown RBP16.82■□□□□ 0.28
LETMD1-229ENST00000551261 BTDP43251 543 aa16.82■□□□□ 0.28
LETMD1-229ENST00000551261 AKNAD1Q5T1N1 836 aa16.82■□□□□ 0.28
LETMD1-229ENST00000551261 FBXW7Q969H0 707 aa16.82■□□□□ 0.28
LETMD1-229ENST00000551261 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
LETMD1-229ENST00000551261 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
LETMD1-229ENST00000551261 TTF2Q9UNY4 1162 aaKnown RBP16.82■□□□□ 0.28
LETMD1-229ENST00000551261 JAG2Q9Y219 1238 aa16.82■□□□□ 0.28
LETMD1-229ENST00000551261 FOCADQ5VW36 1801 aa16.82■□□□□ 0.28
LETMD1-229ENST00000551261 DDX60LQ5H9U9 1706 aaKnown RBP16.82■□□□□ 0.28
LETMD1-229ENST00000551261 FGD1P98174 961 aa16.81■□□□□ 0.28
LETMD1-229ENST00000551261 PPARAQ07869 468 aa16.81■□□□□ 0.28
LETMD1-229ENST00000551261 MFSD6Q6ZSS7 791 aa16.81■□□□□ 0.28
LETMD1-229ENST00000551261 STOX1Q6ZVD7 989 aa16.81■□□□□ 0.28
LETMD1-229ENST00000551261 TMEM87BQ96K49 555 aa16.81■□□□□ 0.28
LETMD1-229ENST00000551261 ZNF287Q9HBT7 754 aa16.81■□□□□ 0.28
LETMD1-229ENST00000551261 DCP1AQ9NPI6 582 aaPredicted RBP16.81■□□□□ 0.28
LETMD1-229ENST00000551261 PPP1R1BQ9UD71 204 aaPredicted RBP16.81■□□□□ 0.28
LETMD1-229ENST00000551261 ZNRF3Q9ULT6 936 aa16.81■□□□□ 0.28
LETMD1-229ENST00000551261 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.81■□□□□ 0.28
LETMD1-229ENST00000551261 USP5P45974 858 aa16.8■□□□□ 0.28
LETMD1-229ENST00000551261 DYNLL1P63167 89 aaKnown RBP16.8■□□□□ 0.28
LETMD1-229ENST00000551261 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
LETMD1-229ENST00000551261 SART3Q15020 963 aaKnown RBP16.8■□□□□ 0.28
LETMD1-229ENST00000551261 DIXDC1Q155Q3 683 aa16.8■□□□□ 0.28
LETMD1-229ENST00000551261 MB21D2Q8IYB1 491 aaPredicted RBP16.8■□□□□ 0.28
LETMD1-229ENST00000551261 CERS5Q8N5B7 392 aa16.8■□□□□ 0.28
LETMD1-229ENST00000551261 SDR42E1Q8WUS8 393 aa16.8■□□□□ 0.28
LETMD1-229ENST00000551261 JDP2Q8WYK2 163 aa16.8■□□□□ 0.28
LETMD1-229ENST00000551261 ZDHHC15Q96MV8 337 aa16.8■□□□□ 0.28
LETMD1-229ENST00000551261 DAGLAQ9Y4D2 1042 aa16.8■□□□□ 0.28
LETMD1-229ENST00000551261 SCN9AQ15858 1988 aa16.79■□□□□ 0.28
LETMD1-229ENST00000551261 PRKAB2O43741 272 aa16.79■□□□□ 0.28
LETMD1-229ENST00000551261 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
LETMD1-229ENST00000551261 SLC4A3P48751 1232 aa16.79■□□□□ 0.28
LETMD1-229ENST00000551261 HAND2P61296 217 aa16.79■□□□□ 0.28
LETMD1-229ENST00000551261 TBC1D10CQ8IV04 446 aa16.79■□□□□ 0.28
LETMD1-229ENST00000551261 AGBL3Q8NEM8 1001 aa16.79■□□□□ 0.28
LETMD1-229ENST00000551261 ESR2Q92731 530 aa16.79■□□□□ 0.28
LETMD1-229ENST00000551261 CHMP5Q9NZZ3 219 aa16.79■□□□□ 0.28
LETMD1-229ENST00000551261 MKRN1Q9UHC7 482 aaKnown RBP16.79■□□□□ 0.28
LETMD1-229ENST00000551261 HDAC9Q9UKV0 1011 aa16.79■□□□□ 0.28
LETMD1-229ENST00000551261 ORC4O43929 436 aa16.78■□□□□ 0.28
LETMD1-229ENST00000551261 FGRP09769 529 aa16.78■□□□□ 0.28
LETMD1-229ENST00000551261 EVCP57679 992 aa16.78■□□□□ 0.28
LETMD1-229ENST00000551261 PDE4BQ07343 736 aa16.78■□□□□ 0.28
LETMD1-229ENST00000551261 RSBN1LQ6PCB5 846 aaPredicted RBP16.78■□□□□ 0.28
LETMD1-229ENST00000551261 TEX11Q8IYF3 940 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms