RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	GRK4	P32298	578 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	DCTN1	Q14203	1278 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	MAP3K11	Q16584	847 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	PARP10	Q53GL7	1025 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	SWT1	Q5T5J6	900 aa	Known RBP	7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	TMC4	Q7Z404	712 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	PXYLP1	Q8TE99	480 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	SYMPK	Q92797	1274 aa	Known RBP	7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	PHACTR3	Q96KR7	559 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	SNX27	Q96L92	541 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	UBE2O	Q9C0C9	1292 aa	Known RBP	7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	ELP3	Q9H9T3	547 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	ZFYVE28	Q9HCC9	887 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	TSR3	Q9UJK0	312 aa	Known RBP	7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	RIPOR2	Q9Y4F9	1068 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	ARAP2	Q8WZ64	1704 aa		7.91	□□□□□ -1.14
RACGAP1-223	ENST00000551260	MYH3	P11055	1940 aa		7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	LTBP2	Q14767	1821 aa		7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	COL2A1	P02458	1487 aa	Predicted RBP	7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	COL3A1	P02461	1466 aa	Predicted RBP	7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	DIAPH1	O60610	1272 aa	Known RBP	7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	SGPL1	O95470	568 aa		7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	KIF22	Q14807	665 aa		7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	METTL3	Q86U44	580 aa	Known RBP	7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	OPTN	Q96CV9	577 aa		7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	PAWR	Q96IZ0	340 aa	Known RBP	7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	CDX2	Q99626	313 aa	Predicted RBP	7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	BIN2	Q9UBW5	565 aa	Predicted RBP	7.9	□□□□□ -1.14
RACGAP1-223	ENST00000551260	FRMPD3	Q5JV73	1810 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	CCL15-CCL14	A0A0B4J2E2	113 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	USP17L3	A6NCW0	530 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	USP17L4	A6NCW7	530 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	RCCD1	A6NED2	376 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	USP2	O75604	605 aa	Predicted RBP	7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	TFRC	P02786	760 aa	Known RBP	7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	ANXA1	P04083	346 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	OAT	P04181	439 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	DNAJB2	P25686	324 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	CCL15	Q16663	113 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	USP17L1	Q7RTZ2	530 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	NLRP10	Q86W26	655 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	APOBEC3F	Q8IUX4	373 aa	Known RBP	7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	RAET1E	Q8TD07	263 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	MYLIP	Q8WY64	445 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	NECTIN2	Q92692	538 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	TRIM47	Q96LD4	638 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	DEFB129	Q9H1M3	183 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	TMEM134	Q9H6X4	195 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	SRRD	Q9UH36	339 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	TRMT112	Q9UI30	125 aa	Known RBP	7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PCDHAC2	Q9Y5I4	1007 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	CDH23	Q9H251	3354 aa		7.89	□□□□□ -1.15
RACGAP1-223	ENST00000551260	COL1A1	P02452	1464 aa	Predicted RBP	7.88	□□□□□ -1.15
RACGAP1-223	ENST00000551260	REV3L	O60673	3130 aa		7.88	□□□□□ -1.15
RACGAP1-223	ENST00000551260	CACNA1A	O00555	2505 aa		7.88	□□□□□ -1.15
RACGAP1-223	ENST00000551260	MYPN	Q86TC9	1320 aa		7.88	□□□□□ -1.15
RACGAP1-223	ENST00000551260	SH3TC1	Q8TE82	1336 aa		7.88	□□□□□ -1.15
RACGAP1-223	ENST00000551260	U2SURP	O15042	1029 aa	Known RBP	7.88	□□□□□ -1.15
RACGAP1-223	ENST00000551260	TLR2	O60603	784 aa		7.88	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PSMC4	P43686	418 aa		7.88	□□□□□ -1.15
RACGAP1-223	ENST00000551260	DACT2	Q5SW24	774 aa		7.88	□□□□□ -1.15
RACGAP1-223	ENST00000551260	FAM109B	Q6ICB4	259 aa	Predicted RBP	7.88	□□□□□ -1.15
RACGAP1-223	ENST00000551260	MAST2	Q6P0Q8	1798 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	AOX1	Q06278	1338 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	SYNGAP1	Q96PV0	1343 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	MUC6	Q6W4X9	2439 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PPP1R12B	O60237	982 aa	Predicted RBP	7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PRMT2	P55345	433 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PPP4C	P60510	307 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PROSER3	Q2NL68	480 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	TJAP1	Q5JTD0	557 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	ZNF697	Q5TEC3	545 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	NYAP1	Q6ZVC0	841 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PODN	Q7Z5L7	613 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	USP38	Q8NB14	1042 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	ZBED3	Q96IU2	234 aa	Predicted RBP	7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	DEFB118	Q96PH6	123 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PHOX2B	Q99453	314 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PODXL2	Q9NZ53	605 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PLA2G2E	Q9NZK7	142 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	ANKIB1	Q9P2G1	1089 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	CPA4	Q9UI42	421 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	GGA1	Q9UJY5	639 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	GABRQ	Q9UN88	632 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PIEZO1	Q92508	2521 aa		7.87	□□□□□ -1.15
RACGAP1-223	ENST00000551260	FMNL1	O95466	1100 aa	Predicted RBP	7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	GNRH1	P01148	92 aa		7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	ELN	P15502	786 aa		7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	IREB2	P48200	963 aa	Known RBP	7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	RPS8	P62241	208 aa	Known RBP	7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	UBXN2A	P68543	259 aa		7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	MDM2	Q00987	491 aa	Predicted RBP	7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	PRKCZ	Q05513	592 aa		7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	RTL5	Q5HYW3	569 aa	Predicted RBP	7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	LRP10	Q7Z4F1	713 aa		7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	KIAA0825	Q8IV33	1275 aa		7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	ANKRD13A	Q8IZ07	590 aa		7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	OGFOD1	Q8N543	542 aa		7.86	□□□□□ -1.15
RACGAP1-223	ENST00000551260	SEC31B	Q9NQW1	1179 aa		7.86	□□□□□ -1.15

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