RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 PCDHA5Q9Y5H7 936 aa14.02□□□□□ -0.16
ERBB3-219ENST00000551242 EIF3JO75822 258 aaKnown RBP14.02□□□□□ -0.17
ERBB3-219ENST00000551242 CASP8Q14790 479 aa14.02□□□□□ -0.17
ERBB3-219ENST00000551242 SPECC1LQ69YQ0 1117 aa14.02□□□□□ -0.17
ERBB3-219ENST00000551242 METTL16Q86W50 562 aaKnown RBP14.02□□□□□ -0.17
ERBB3-219ENST00000551242 GPATCH11Q8N954 259 aa14.02□□□□□ -0.17
ERBB3-219ENST00000551242 AIFM3Q96NN9 605 aa14.02□□□□□ -0.17
ERBB3-219ENST00000551242 GOLIM4O00461 696 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 RPS6KA5O75582 802 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 CORO7P57737 925 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 LONRF3Q496Y0 759 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 C19orf44Q9H6X5 657 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 FAM204AQ9H8W3 233 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 RAB21Q9UL25 225 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 AMOTL2Q9Y2J4 779 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 USP5P45974 858 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 HAND2P61296 217 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 KIF23Q02241 960 aaPredicted RBP14.01□□□□□ -0.17
ERBB3-219ENST00000551242 ZNF827Q17R98 1081 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 HSP90B2PQ58FF3 399 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 CPLX3Q8WVH0 158 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 CDC23Q9UJX2 597 aa14.01□□□□□ -0.17
ERBB3-219ENST00000551242 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
ERBB3-219ENST00000551242 ERLIN1O75477 346 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 CCDC175P0C221 793 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 HSPD1P10809 573 aaKnown RBP14□□□□□ -0.17
ERBB3-219ENST00000551242 FMR1Q06787 632 aaKnown RBP eCLIP14□□□□□ -0.17
ERBB3-219ENST00000551242 SLC39A14Q15043 492 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 KIF4BQ2VIQ3 1234 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 ZNF569Q5MCW4 686 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 BRAPQ7Z569 592 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 PPM1EQ8WY54 764 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 HAUS7Q99871 368 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 NFE2L3Q9Y4A8 694 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 LRRIQ3A6PVS8 624 aaPredicted RBP14□□□□□ -0.17
ERBB3-219ENST00000551242 ATP2B1P20020 1258 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 SPECC1Q5M775 1068 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 RAD9BQ6WBX8 426 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 KBTBD3Q8NAB2 608 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 MSANTD4Q8NCY6 345 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 GNL3Q9BVP2 549 aaKnown RBP eCLIP14□□□□□ -0.17
ERBB3-219ENST00000551242 KLF18A0A0U1RQI7 1052 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 GOLGA8BA8MQT2 603 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 NCAPGQ9BPX3 1015 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 BRMS1Q9HCU9 246 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 MKRN1Q9UHC7 482 aaKnown RBP14□□□□□ -0.17
ERBB3-219ENST00000551242 HPSEQ9Y251 543 aa14□□□□□ -0.17
ERBB3-219ENST00000551242 UTYO14607 1347 aa13.99□□□□□ -0.17
ERBB3-219ENST00000551242 SETD1BQ9UPS6 1966 aaKnown RBP13.99□□□□□ -0.17
ERBB3-219ENST00000551242 CPLX1O14810 134 aa13.99□□□□□ -0.17
ERBB3-219ENST00000551242 ABL1P00519 1130 aa13.99□□□□□ -0.17
ERBB3-219ENST00000551242 RIC3Q7Z5B4 369 aa13.99□□□□□ -0.17
ERBB3-219ENST00000551242 CEP112Q8N8E3 955 aa13.99□□□□□ -0.17
ERBB3-219ENST00000551242 SAMSN1Q9NSI8 373 aaKnown RBP13.99□□□□□ -0.17
ERBB3-219ENST00000551242 KIF5CO60282 957 aa13.99□□□□□ -0.17
ERBB3-219ENST00000551242 ZNF530Q6P9A1 599 aaPredicted RBP13.99□□□□□ -0.17
ERBB3-219ENST00000551242 TEX2Q8IWB9 1127 aa13.99□□□□□ -0.17
ERBB3-219ENST00000551242 TEX13AQ9BXU3 409 aaPredicted RBP13.99□□□□□ -0.17
ERBB3-219ENST00000551242 DEF6Q9H4E7 631 aa13.99□□□□□ -0.17
ERBB3-219ENST00000551242 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
ERBB3-219ENST00000551242 HPS5Q9UPZ3 1129 aa13.99□□□□□ -0.17
ERBB3-219ENST00000551242 ADGRG1Q9Y653 693 aa13.99□□□□□ -0.17
ERBB3-219ENST00000551242 PTPN12Q05209 780 aaKnown RBP13.98□□□□□ -0.17
ERBB3-219ENST00000551242 C14orf37Q86TY3 774 aa13.98□□□□□ -0.17
ERBB3-219ENST00000551242 NOA1Q8NC60 698 aaKnown RBP13.98□□□□□ -0.17
ERBB3-219ENST00000551242 FAM71BQ8TC56 605 aa13.98□□□□□ -0.17
ERBB3-219ENST00000551242 MYCBPQ99417 103 aaPredicted RBP13.98□□□□□ -0.17
ERBB3-219ENST00000551242 CDC5LQ99459 802 aaKnown RBP13.98□□□□□ -0.17
ERBB3-219ENST00000551242 DSCC1Q9BVC3 393 aa13.98□□□□□ -0.17
ERBB3-219ENST00000551242 SH3TC1Q8TE82 1336 aa13.98□□□□□ -0.17
ERBB3-219ENST00000551242 TOPAZ1Q8N9V7 1692 aa13.98□□□□□ -0.17
ERBB3-219ENST00000551242 TEX33O43247 280 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 MYL6BP14649 208 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 CCDC102BQ68D86 513 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 SLC35F6Q8N357 371 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 NEUROD6Q96NK8 337 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 RAI14Q9P0K7 980 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 RNF40O75150 1001 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 STK11IPQ8N1F8 1099 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 MICALL1Q8N3F8 863 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 MED15Q96RN5 788 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 COPRSQ9NQ92 184 aa13.97□□□□□ -0.17
ERBB3-219ENST00000551242 ADAMTS13Q76LX8 1427 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 PTPRUQ92729 1446 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 NEURL1BA8MQ27 555 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 AKR1B15C9JRZ8 316 aaPredicted RBP13.96□□□□□ -0.17
ERBB3-219ENST00000551242 DDX58O95786 925 aaKnown RBP13.96□□□□□ -0.17
ERBB3-219ENST00000551242 ZNF18P17022 549 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 GCKRQ14397 625 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 VPS37DQ86XT2 251 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 RIN2Q8WYP3 895 aaPredicted RBP13.96□□□□□ -0.17
ERBB3-219ENST00000551242 SECISBP2LQ93073 1101 aaKnown RBP13.96□□□□□ -0.17
ERBB3-219ENST00000551242 GDAP1L1Q96MZ0 367 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 MYD88Q99836 296 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 PAG1Q9NWQ8 432 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 KCNH3Q9ULD8 1083 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 MAST3O60307 1309 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 PALLDQ8WX93 1383 aa13.96□□□□□ -0.17
ERBB3-219ENST00000551242 CTAGE9A4FU28 777 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms