RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 SPEF2Q9C093 1822 aa14.64□□□□□ -0.07
GPN3-208ENST00000550974 SNAP23O00161 211 aa14.64□□□□□ -0.07
GPN3-208ENST00000550974 COL6A1P12109 1028 aa14.64□□□□□ -0.07
GPN3-208ENST00000550974 INPP5BP32019 993 aa14.64□□□□□ -0.07
GPN3-208ENST00000550974 CCDC191Q8NCU4 936 aa14.64□□□□□ -0.07
GPN3-208ENST00000550974 LRFN3Q9BTN0 628 aa14.64□□□□□ -0.07
GPN3-208ENST00000550974 CWC25Q9NXE8 425 aaPredicted RBP14.64□□□□□ -0.07
GPN3-208ENST00000550974 TTF2Q9UNY4 1162 aaKnown RBP14.64□□□□□ -0.07
GPN3-208ENST00000550974 CACNB3P54284 484 aa14.63□□□□□ -0.07
GPN3-208ENST00000550974 GRIN2CQ14957 1233 aa14.63□□□□□ -0.07
GPN3-208ENST00000550974 MIGA2Q7L4E1 593 aa14.63□□□□□ -0.07
GPN3-208ENST00000550974 THEGQ9P2T0 379 aa14.63□□□□□ -0.07
GPN3-208ENST00000550974 PRKAG2Q9UGJ0 569 aa14.63□□□□□ -0.07
GPN3-208ENST00000550974 SERPINA10Q9UK55 444 aa14.63□□□□□ -0.07
GPN3-208ENST00000550974 IL1R1P14778 569 aa14.62□□□□□ -0.07
GPN3-208ENST00000550974 MRPS5P82675 430 aaKnown RBP14.62□□□□□ -0.07
GPN3-208ENST00000550974 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
GPN3-208ENST00000550974 ARAP2Q8WZ64 1704 aa14.62□□□□□ -0.07
GPN3-208ENST00000550974 HOOK2Q96ED9 719 aa14.62□□□□□ -0.07
GPN3-208ENST00000550974 NECAB3Q96P71 396 aaPredicted RBP14.62□□□□□ -0.07
GPN3-208ENST00000550974 ZNF341Q9BYN7 854 aa14.62□□□□□ -0.07
GPN3-208ENST00000550974 BABAM1Q9NWV8 329 aa14.62□□□□□ -0.07
GPN3-208ENST00000550974 HYPKQ9NX55 129 aa14.62□□□□□ -0.07
GPN3-208ENST00000550974 LAMA2P24043 3122 aaKnown RBP14.62□□□□□ -0.07
GPN3-208ENST00000550974 CRKP46108 304 aa14.61□□□□□ -0.07
GPN3-208ENST00000550974 DCAF15Q66K64 600 aa14.61□□□□□ -0.07
GPN3-208ENST00000550974 ZNF804AQ7Z570 1209 aa14.61□□□□□ -0.07
GPN3-208ENST00000550974 SMCR8Q8TEV9 937 aaPredicted RBP14.61□□□□□ -0.07
GPN3-208ENST00000550974 PLEKHF1Q96S99 279 aa14.61□□□□□ -0.07
GPN3-208ENST00000550974 MPHOSPH8Q99549 860 aa14.61□□□□□ -0.07
GPN3-208ENST00000550974 CHRNDQ07001 517 aa14.6□□□□□ -0.07
GPN3-208ENST00000550974 ANKRD13CQ8N6S4 541 aa14.6□□□□□ -0.07
GPN3-208ENST00000550974 TAF5LO75529 589 aa14.59□□□□□ -0.07
GPN3-208ENST00000550974 PDE3AQ14432 1141 aa14.59□□□□□ -0.07
GPN3-208ENST00000550974 MFSD14BQ5SR56 506 aa14.59□□□□□ -0.07
GPN3-208ENST00000550974 TIMELESSQ9UNS1 1208 aa14.59□□□□□ -0.07
GPN3-208ENST00000550974 MAPK8IP3Q9UPT6 1336 aa14.59□□□□□ -0.07
GPN3-208ENST00000550974 CXCL11O14625 94 aa14.58□□□□□ -0.08
GPN3-208ENST00000550974 PPP2R1AP30153 589 aa14.58□□□□□ -0.08
GPN3-208ENST00000550974 GADL1Q6ZQY3 521 aa14.58□□□□□ -0.08
GPN3-208ENST00000550974 FASTKD5Q7L8L6 764 aaKnown RBP14.58□□□□□ -0.08
GPN3-208ENST00000550974 SENP6Q9GZR1 1112 aaPredicted RBP14.58□□□□□ -0.08
GPN3-208ENST00000550974 EPHX3Q9H6B9 360 aa14.58□□□□□ -0.08
GPN3-208ENST00000550974 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
GPN3-208ENST00000550974 ATN1P54259 1190 aaPredicted RBP14.57□□□□□ -0.08
GPN3-208ENST00000550974 POTEEQ6S8J3 1075 aa14.57□□□□□ -0.08
GPN3-208ENST00000550974 C15orf52Q6ZUT6 534 aaKnown RBP14.57□□□□□ -0.08
GPN3-208ENST00000550974 TRIB2Q92519 343 aa14.57□□□□□ -0.08
GPN3-208ENST00000550974 P2RX7Q99572 595 aaKnown RBP14.57□□□□□ -0.08
GPN3-208ENST00000550974 PHAXQ9H814 394 aaKnown RBP14.57□□□□□ -0.08
GPN3-208ENST00000550974 TMOD2Q9NZR1 351 aa14.57□□□□□ -0.08
GPN3-208ENST00000550974 LAS1LQ9Y4W2 734 aaKnown RBP14.57□□□□□ -0.08
GPN3-208ENST00000550974 ITGA6P23229 1130 aa14.56□□□□□ -0.08
GPN3-208ENST00000550974 MRE11P49959 708 aa14.56□□□□□ -0.08
GPN3-208ENST00000550974 RIPK4P57078 832 aa14.56□□□□□ -0.08
GPN3-208ENST00000550974 TMEM31Q5JXX7 168 aa14.56□□□□□ -0.08
GPN3-208ENST00000550974 GJD2Q9UKL4 321 aa14.56□□□□□ -0.08
GPN3-208ENST00000550974 CYP2B6P20813 491 aa14.55□□□□□ -0.08
GPN3-208ENST00000550974 CCDC85BQ15834 202 aaPredicted RBP14.55□□□□□ -0.08
GPN3-208ENST00000550974 FAM83AQ86UY5 434 aa14.55□□□□□ -0.08
GPN3-208ENST00000550974 BADQ92934 168 aa14.55□□□□□ -0.08
GPN3-208ENST00000550974 PRDM5Q9NQX1 630 aaPredicted RBP14.55□□□□□ -0.08
GPN3-208ENST00000550974 A0A0G2JLL6 359 aaPredicted RBP14.54□□□□□ -0.08
GPN3-208ENST00000550974 MAP3K21Q5TCX8 1036 aa14.54□□□□□ -0.08
GPN3-208ENST00000550974 LHX8Q68G74 356 aa14.54□□□□□ -0.08
GPN3-208ENST00000550974 PRRT2Q7Z6L0 340 aaPredicted RBP14.54□□□□□ -0.08
GPN3-208ENST00000550974 GAS2L1Q99501 681 aaPredicted RBP14.54□□□□□ -0.08
GPN3-208ENST00000550974 METTL22Q9BUU2 404 aaPredicted RBP14.54□□□□□ -0.08
GPN3-208ENST00000550974 ZNF576Q9H609 170 aa14.54□□□□□ -0.08
GPN3-208ENST00000550974 ZNF112Q9UJU3 913 aa14.54□□□□□ -0.08
GPN3-208ENST00000550974 SLC45A1Q9Y2W3 748 aa14.54□□□□□ -0.08
GPN3-208ENST00000550974 CCND3P30281 292 aaPredicted RBP14.53□□□□□ -0.08
GPN3-208ENST00000550974 RTP1P59025 263 aa14.53□□□□□ -0.08
GPN3-208ENST00000550974 FAM110CQ1W6H9 321 aa14.53□□□□□ -0.08
GPN3-208ENST00000550974 NOL9Q5SY16 702 aaKnown RBP14.53□□□□□ -0.08
GPN3-208ENST00000550974 RNPC3Q96LT9 517 aaKnown RBP14.53□□□□□ -0.08
GPN3-208ENST00000550974 ZHX2Q9Y6X8 837 aa14.53□□□□□ -0.08
GPN3-208ENST00000550974 HOXB7P09629 217 aa14.52□□□□□ -0.09
GPN3-208ENST00000550974 DNAJB2P25686 324 aa14.52□□□□□ -0.09
GPN3-208ENST00000550974 GRIK5Q16478 980 aa14.52□□□□□ -0.09
GPN3-208ENST00000550974 AKNAD1Q5T1N1 836 aa14.52□□□□□ -0.09
GPN3-208ENST00000550974 ATP11BQ9Y2G3 1177 aa14.52□□□□□ -0.09
GPN3-208ENST00000550974 LTBP2Q14767 1821 aa14.51□□□□□ -0.09
GPN3-208ENST00000550974 CHL1O00533 1208 aa14.51□□□□□ -0.09
GPN3-208ENST00000550974 CACNB2Q08289 660 aaPredicted RBP14.51□□□□□ -0.09
GPN3-208ENST00000550974 TEKT1Q969V4 418 aa14.51□□□□□ -0.09
GPN3-208ENST00000550974 PNNQ9H307 717 aaKnown RBP14.51□□□□□ -0.09
GPN3-208ENST00000550974 MAST2Q6P0Q8 1798 aa14.51□□□□□ -0.09
GPN3-208ENST00000550974 DOCK3Q8IZD9 2030 aa14.5□□□□□ -0.09
GPN3-208ENST00000550974 FAM86C2PA6NEL3 165 aa14.5□□□□□ -0.09
GPN3-208ENST00000550974 BMP1P13497 986 aa14.5□□□□□ -0.09
GPN3-208ENST00000550974 DUSP27Q5VZP5 1158 aa14.5□□□□□ -0.09
GPN3-208ENST00000550974 TDRD7Q8NHU6 1098 aaKnown RBP14.5□□□□□ -0.09
GPN3-208ENST00000550974 PICK1Q9NRD5 415 aa14.5□□□□□ -0.09
GPN3-208ENST00000550974 RPAP1Q9BWH6 1393 aaPredicted RBP14.49□□□□□ -0.09
GPN3-208ENST00000550974 PLIN1O60240 522 aa14.49□□□□□ -0.09
GPN3-208ENST00000550974 TCP10Q12799 353 aa14.49□□□□□ -0.09
GPN3-208ENST00000550974 FKBP1CQ5VVH2 108 aa14.49□□□□□ -0.09
GPN3-208ENST00000550974 TIFAQ96CG3 184 aa14.49□□□□□ -0.09
GPN3-208ENST00000550974 PRDM12Q9H4Q4 367 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms