RNA–Protein interactions for RNA: ENST00000550636.1

LINC02396-202, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 2 BASIC

Gene LINC02396, Length 2,324 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-202ENST00000550636 RIOK1Q9BRS2 568 aaKnown RBP17.13■□□□□ 0.33
LINC02396-202ENST00000550636 CNPY2Q9Y2B0 182 aa17.13■□□□□ 0.33
LINC02396-202ENST00000550636 KLRG2A4D1S0 409 aaPredicted RBP17.12■□□□□ 0.33
LINC02396-202ENST00000550636 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
LINC02396-202ENST00000550636 DYNLL1P63167 89 aaKnown RBP17.12■□□□□ 0.33
LINC02396-202ENST00000550636 CAVIN1Q6NZI2 390 aaKnown RBP17.12■□□□□ 0.33
LINC02396-202ENST00000550636 MFSD6Q6ZSS7 791 aa17.12■□□□□ 0.33
LINC02396-202ENST00000550636 GPR101Q96P66 508 aaPredicted RBP17.12■□□□□ 0.33
LINC02396-202ENST00000550636 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
LINC02396-202ENST00000550636 PRDX5P30044 214 aa17.12■□□□□ 0.33
LINC02396-202ENST00000550636 AKNAD1Q5T1N1 836 aa17.12■□□□□ 0.33
LINC02396-202ENST00000550636 ZNF804AQ7Z570 1209 aa17.12■□□□□ 0.33
LINC02396-202ENST00000550636 FERMT3Q86UX7 667 aa17.12■□□□□ 0.33
LINC02396-202ENST00000550636 NEDD4P46934 1319 aa17.11■□□□□ 0.33
LINC02396-202ENST00000550636 PTPDC1A2A3K4 754 aa17.11■□□□□ 0.33
LINC02396-202ENST00000550636 UFL1O94874 794 aa17.11■□□□□ 0.33
LINC02396-202ENST00000550636 ATP2B4P23634 1241 aa17.11■□□□□ 0.33
LINC02396-202ENST00000550636 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
LINC02396-202ENST00000550636 DNM1Q05193 864 aaKnown RBP17.11■□□□□ 0.33
LINC02396-202ENST00000550636 RGS17Q9UGC6 210 aaPredicted RBP17.11■□□□□ 0.33
LINC02396-202ENST00000550636 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
LINC02396-202ENST00000550636 ANGEL1Q9UNK9 670 aaKnown RBP17.11■□□□□ 0.33
LINC02396-202ENST00000550636 H3BQV1 296 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 IFFO2Q5TF58 517 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 SPTY2D1Q68D10 685 aaPredicted RBP17.1■□□□□ 0.33
LINC02396-202ENST00000550636 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
LINC02396-202ENST00000550636 BRIP1Q9BX63 1249 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 CNNM2Q9H8M5 875 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 ZSWIM5Q9P217 1185 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 MINDY4BA8MYZ0 360 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 ZBTB22O15209 634 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 MBD3O95983 291 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 C15orf52Q6ZUT6 534 aaKnown RBP17.1■□□□□ 0.33
LINC02396-202ENST00000550636 WDR66Q8TBY9 1149 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 KRT23Q9C075 422 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 TOMM22Q9NS69 142 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 TACC3Q9Y6A5 838 aa17.1■□□□□ 0.33
LINC02396-202ENST00000550636 DHX16O60231 1041 aaKnown RBP17.09■□□□□ 0.33
LINC02396-202ENST00000550636 PPFIA3O75145 1194 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 KDM4AO75164 1064 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 POTEAQ6S8J7 498 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
LINC02396-202ENST00000550636 GADD45BO75293 160 aaPredicted RBP17.09■□□□□ 0.33
LINC02396-202ENST00000550636 MMP10P09238 476 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 PPARAQ07869 468 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 RRP12Q5JTH9 1297 aaKnown RBP17.09■□□□□ 0.33
LINC02396-202ENST00000550636 RAB11FIP4Q86YS3 637 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 IGDCC4Q8TDY8 1250 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 AATFQ9NY61 560 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC02396-202ENST00000550636 HPS5Q9UPZ3 1129 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
LINC02396-202ENST00000550636 FIBPO43427 364 aa17.08■□□□□ 0.33
LINC02396-202ENST00000550636 TERF1P54274 439 aa17.08■□□□□ 0.33
LINC02396-202ENST00000550636 DZIP1Q86YF9 867 aaKnown RBP17.08■□□□□ 0.33
LINC02396-202ENST00000550636 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.33
LINC02396-202ENST00000550636 RNF41Q9H4P4 317 aaPredicted RBP17.08■□□□□ 0.33
LINC02396-202ENST00000550636 TMEM67Q5HYA8 995 aa17.08■□□□□ 0.32
LINC02396-202ENST00000550636 PDCL3Q9H2J4 239 aa17.08■□□□□ 0.32
LINC02396-202ENST00000550636 PODXL2Q9NZ53 605 aa17.08■□□□□ 0.32
LINC02396-202ENST00000550636 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.32
LINC02396-202ENST00000550636 IFIT3O14879 490 aaKnown RBP17.07■□□□□ 0.32
LINC02396-202ENST00000550636 LDHBP07195 334 aaKnown RBP17.07■□□□□ 0.32
LINC02396-202ENST00000550636 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 TMED8Q6PL24 325 aaPredicted RBP17.07■□□□□ 0.32
LINC02396-202ENST00000550636 NFXL1Q6ZNB6 911 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 SP8Q8IXZ3 490 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 TBC1D16Q8TBP0 767 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 CD209Q9NNX6 404 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 CACNA1SQ13698 1873 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 C6orf229H3BNL8 230 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 CPLX1O14810 134 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 PPEF1O14829 653 aaPredicted RBP17.07■□□□□ 0.32
LINC02396-202ENST00000550636 SRGNP10124 158 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 CSPP1Q1MSJ5 1256 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 MSL1Q68DK7 614 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 TMC4Q7Z404 712 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 TRIM44Q96DX7 344 aaPredicted RBP17.07■□□□□ 0.32
LINC02396-202ENST00000550636 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
LINC02396-202ENST00000550636 FOSBP53539 338 aa17.06■□□□□ 0.32
LINC02396-202ENST00000550636 ZSCAN23Q3MJ62 389 aa17.06■□□□□ 0.32
LINC02396-202ENST00000550636 CRNKL1Q9BZJ0 848 aaKnown RBP17.06■□□□□ 0.32
LINC02396-202ENST00000550636 LY9Q9HBG7 655 aa17.06■□□□□ 0.32
LINC02396-202ENST00000550636 SENP2Q9HC62 589 aa17.06■□□□□ 0.32
LINC02396-202ENST00000550636 ANAPC4Q9UJX5 808 aa17.06■□□□□ 0.32
LINC02396-202ENST00000550636 PDE6BP35913 854 aa17.05■□□□□ 0.32
LINC02396-202ENST00000550636 TPRNQ4KMQ1 711 aa17.05■□□□□ 0.32
LINC02396-202ENST00000550636 GIMAP6Q6P9H5 292 aa17.05■□□□□ 0.32
LINC02396-202ENST00000550636 FDPSP14324 419 aaKnown RBP17.05■□□□□ 0.32
LINC02396-202ENST00000550636 NPR1P16066 1061 aa17.05■□□□□ 0.32
LINC02396-202ENST00000550636 LIFRP42702 1097 aa17.05■□□□□ 0.32
LINC02396-202ENST00000550636 KRT85P78386 507 aa17.05■□□□□ 0.32
LINC02396-202ENST00000550636 GAS2L3Q86XJ1 694 aa17.05■□□□□ 0.32
LINC02396-202ENST00000550636 TMEM63CQ9P1W3 806 aa17.05■□□□□ 0.32
LINC02396-202ENST00000550636 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms