RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 RGS9O75916 674 aaPredicted RBP8.06□□□□□ -1.12
SCAF11-213ENST00000550629 ELNP15502 786 aa8.06□□□□□ -1.12
SCAF11-213ENST00000550629 KCNA6P17658 529 aa8.06□□□□□ -1.12
SCAF11-213ENST00000550629 NRLP54845 237 aa8.06□□□□□ -1.12
SCAF11-213ENST00000550629 GPLD1P80108 840 aa8.06□□□□□ -1.12
SCAF11-213ENST00000550629 PRSS36Q5K4E3 855 aa8.06□□□□□ -1.12
SCAF11-213ENST00000550629 HFE2Q6ZVN8 426 aa8.06□□□□□ -1.12
SCAF11-213ENST00000550629 CARD11Q9BXL7 1154 aa8.06□□□□□ -1.12
SCAF11-213ENST00000550629 CPS1P31327 1500 aa8.06□□□□□ -1.12
SCAF11-213ENST00000550629 A0A0A0MRY4 1105 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 AFF1P51825 1210 aaKnown RBP8.05□□□□□ -1.12
SCAF11-213ENST00000550629 MTMR3Q13615 1198 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 MBTPS1Q14703 1052 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 FOXD4L6Q3SYB3 417 aaPredicted RBP8.05□□□□□ -1.12
SCAF11-213ENST00000550629 PERM1Q5SV97 790 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 TMEM132EQ6IEE7 984 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 FOXD4L3Q6VB84 417 aaPredicted RBP8.05□□□□□ -1.12
SCAF11-213ENST00000550629 NLRP13Q86W25 1043 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 LPIN3Q9BQK8 851 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 ZFP64Q9NPA5 681 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 USTQ9Y2C2 406 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 AMOTL2Q9Y2J4 779 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 KNDC1Q76NI1 1749 aa8.05□□□□□ -1.12
SCAF11-213ENST00000550629 PTPRUQ92729 1446 aa8.04□□□□□ -1.12
SCAF11-213ENST00000550629 NCOA3Q9Y6Q9 1424 aa8.04□□□□□ -1.12
SCAF11-213ENST00000550629 CHD2O14647 1828 aaKnown RBP8.04□□□□□ -1.12
SCAF11-213ENST00000550629 PSAPP07602 524 aa8.04□□□□□ -1.12
SCAF11-213ENST00000550629 ARID4AP29374 1257 aaPredicted RBP8.04□□□□□ -1.12
SCAF11-213ENST00000550629 NRG1Q02297 640 aaPredicted RBP8.04□□□□□ -1.12
SCAF11-213ENST00000550629 PLAURQ03405 335 aa8.04□□□□□ -1.12
SCAF11-213ENST00000550629 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
SCAF11-213ENST00000550629 TXNRD3Q86VQ6 643 aa8.04□□□□□ -1.12
SCAF11-213ENST00000550629 USP47Q96K76 1375 aa8.03□□□□□ -1.12
SCAF11-213ENST00000550629 ROBO2Q9HCK4 1378 aa8.03□□□□□ -1.12
SCAF11-213ENST00000550629 SBNO2Q9Y2G9 1366 aa8.03□□□□□ -1.12
SCAF11-213ENST00000550629 MPSTP25325 297 aa8.03□□□□□ -1.12
SCAF11-213ENST00000550629 ARTNQ5T4W7 220 aa8.03□□□□□ -1.12
SCAF11-213ENST00000550629 LCE1DQ5T752 114 aa8.03□□□□□ -1.12
SCAF11-213ENST00000550629 ELMSAN1Q6PJG2 1045 aa8.03□□□□□ -1.12
SCAF11-213ENST00000550629 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
SCAF11-213ENST00000550629 FRRS1LQ9P0K9 344 aa8.03□□□□□ -1.12
SCAF11-213ENST00000550629 USP21Q9UK80 565 aa8.03□□□□□ -1.12
SCAF11-213ENST00000550629 FNDC3AQ9Y2H6 1198 aaKnown RBP8.03□□□□□ -1.12
SCAF11-213ENST00000550629 LOC102724428A0A0B4J2F2 783 aa8.02□□□□□ -1.13
SCAF11-213ENST00000550629 J3QW42 95 aa8.02□□□□□ -1.13
SCAF11-213ENST00000550629 SELPP16109 830 aa8.02□□□□□ -1.13
SCAF11-213ENST00000550629 SOX18P35713 384 aa8.02□□□□□ -1.13
SCAF11-213ENST00000550629 EIF1AXP47813 144 aaKnown RBP8.02□□□□□ -1.13
SCAF11-213ENST00000550629 SIK1P57059 783 aa8.02□□□□□ -1.13
SCAF11-213ENST00000550629 GRIK5Q16478 980 aa8.02□□□□□ -1.13
SCAF11-213ENST00000550629 NOM1Q5C9Z4 860 aaKnown RBP8.02□□□□□ -1.13
SCAF11-213ENST00000550629 NBPF11Q86T75 865 aa8.02□□□□□ -1.13
SCAF11-213ENST00000550629 NSUN5Q96P11 429 aaKnown RBP8.02□□□□□ -1.13
SCAF11-213ENST00000550629 SMG9Q9H0W8 520 aaKnown RBP8.02□□□□□ -1.13
SCAF11-213ENST00000550629 STK26Q9P289 416 aa8.02□□□□□ -1.13
SCAF11-213ENST00000550629 ZNF335Q9H4Z2 1342 aaPredicted RBP8.02□□□□□ -1.13
SCAF11-213ENST00000550629 CENPJQ9HC77 1338 aaPredicted RBP8.02□□□□□ -1.13
SCAF11-213ENST00000550629 ARHGEF28Q8N1W1 1705 aaKnown RBP8.01□□□□□ -1.13
SCAF11-213ENST00000550629 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
SCAF11-213ENST00000550629 H2AFB2P0C5Z0 115 aa8.01□□□□□ -1.13
SCAF11-213ENST00000550629 HOXD8P13378 290 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-213ENST00000550629 EIF2AK2P19525 551 aaKnown RBP8.01□□□□□ -1.13
SCAF11-213ENST00000550629 DNM1Q05193 864 aaKnown RBP8.01□□□□□ -1.13
SCAF11-213ENST00000550629 SHISA2Q6UWI4 295 aa8.01□□□□□ -1.13
SCAF11-213ENST00000550629 DMRTC2Q8IXT2 367 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-213ENST00000550629 OR13H1Q8NG92 308 aa8.01□□□□□ -1.13
SCAF11-213ENST00000550629 EDEM1Q92611 657 aa8.01□□□□□ -1.13
SCAF11-213ENST00000550629 LENG1Q96BZ8 264 aaPredicted RBP8.01□□□□□ -1.13
SCAF11-213ENST00000550629 PRAM1Q96QH2 718 aa8.01□□□□□ -1.13
SCAF11-213ENST00000550629 POGKQ9P215 609 aa8.01□□□□□ -1.13
SCAF11-213ENST00000550629 TRAK1Q9UPV9 953 aa8.01□□□□□ -1.13
SCAF11-213ENST00000550629 LTBP4Q8N2S1 1624 aa8□□□□□ -1.13
SCAF11-213ENST00000550629 LRRC7Q96NW7 1537 aa8□□□□□ -1.13
SCAF11-213ENST00000550629 ABL1P00519 1130 aa8□□□□□ -1.13
SCAF11-213ENST00000550629 ILDR2Q71H61 639 aa8□□□□□ -1.13
SCAF11-213ENST00000550629 RETREG2Q8NC44 543 aa8□□□□□ -1.13
SCAF11-213ENST00000550629 TTC9Q92623 222 aa8□□□□□ -1.13
SCAF11-213ENST00000550629 TP53INP1Q96A56 240 aa8□□□□□ -1.13
SCAF11-213ENST00000550629 MTMR7Q9Y216 660 aa8□□□□□ -1.13
SCAF11-213ENST00000550629 DCCP43146 1447 aa8□□□□□ -1.13
SCAF11-213ENST00000550629 ADGRB2O60241 1585 aa8□□□□□ -1.13
SCAF11-213ENST00000550629 TMEM94Q12767 1356 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 ST20-MTHFSA0A0A6YYL1 179 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 GHRHP01286 108 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 PDGFAP04085 211 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 NPR3P17342 541 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 COL13A1Q5TAT6 717 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-213ENST00000550629 TTC39BQ5VTQ0 682 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-213ENST00000550629 MSL1Q68DK7 614 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 FMR1NBQ8N0W7 255 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-213ENST00000550629 PLD4Q96BZ4 506 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 GGNBP2Q9H3C7 697 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 ELP3Q9H9T3 547 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 ADGRL3Q9HAR2 1447 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 ANO2Q9NQ90 1003 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 ABI2Q9NYB9 513 aaPredicted RBP7.99□□□□□ -1.13
SCAF11-213ENST00000550629 STRCP1A6NGW2 1772 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 IQSEC2Q5JU85 1478 aa7.99□□□□□ -1.13
SCAF11-213ENST00000550629 CDC42BPGQ6DT37 1551 aa7.98□□□□□ -1.13
SCAF11-213ENST00000550629 HSPA5P11021 654 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms