RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 HHIPL2Q6UWX4 724 aa12.34□□□□□ -0.43
RAB5C-207ENST00000550504 SH3RF3Q8TEJ3 882 aaPredicted RBP12.34□□□□□ -0.43
RAB5C-207ENST00000550504 FAM163AQ96GL9 167 aaPredicted RBP12.34□□□□□ -0.43
RAB5C-207ENST00000550504 STRBPQ96SI9 672 aaKnown RBP12.34□□□□□ -0.43
RAB5C-207ENST00000550504 RIOK1Q9BRS2 568 aaKnown RBP12.34□□□□□ -0.43
RAB5C-207ENST00000550504 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
RAB5C-207ENST00000550504 APPP05067 770 aa12.33□□□□□ -0.44
RAB5C-207ENST00000550504 DLGAP5Q15398 846 aa12.33□□□□□ -0.44
RAB5C-207ENST00000550504 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
RAB5C-207ENST00000550504 VPS53Q5VIR6 699 aa12.33□□□□□ -0.44
RAB5C-207ENST00000550504 APOBEC3HQ6NTF7 200 aaKnown RBP12.33□□□□□ -0.44
RAB5C-207ENST00000550504 DPY19L2Q6NUT2 758 aa12.33□□□□□ -0.44
RAB5C-207ENST00000550504 DPF2Q92785 391 aa12.33□□□□□ -0.44
RAB5C-207ENST00000550504 ZDHHC15Q96MV8 337 aa12.33□□□□□ -0.44
RAB5C-207ENST00000550504 MRIQ9BWK5 157 aa12.33□□□□□ -0.44
RAB5C-207ENST00000550504 LSG1Q9H089 658 aaKnown RBP12.33□□□□□ -0.44
RAB5C-207ENST00000550504 SLC4A4Q9Y6R1 1079 aa12.33□□□□□ -0.44
RAB5C-207ENST00000550504 HSPD1P10809 573 aaKnown RBP12.32□□□□□ -0.44
RAB5C-207ENST00000550504 ZNF280AP59817 542 aaPredicted RBP12.32□□□□□ -0.44
RAB5C-207ENST00000550504 PPP4CP60510 307 aa12.32□□□□□ -0.44
RAB5C-207ENST00000550504 TBC1D10BQ4KMP7 808 aaPredicted RBP12.32□□□□□ -0.44
RAB5C-207ENST00000550504 SDR42E1Q8WUS8 393 aa12.32□□□□□ -0.44
RAB5C-207ENST00000550504 PRMT6Q96LA8 375 aaPredicted RBP12.32□□□□□ -0.44
RAB5C-207ENST00000550504 CRNKL1Q9BZJ0 848 aaKnown RBP12.32□□□□□ -0.44
RAB5C-207ENST00000550504 MYOZ2Q9NPC6 264 aa12.32□□□□□ -0.44
RAB5C-207ENST00000550504 USP40Q9NVE5 1235 aa12.32□□□□□ -0.44
RAB5C-207ENST00000550504 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
RAB5C-207ENST00000550504 ZC3H4Q9UPT8 1303 aaKnown RBP12.32□□□□□ -0.44
RAB5C-207ENST00000550504 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 PATL2C9JE40 543 aaKnown RBP12.31□□□□□ -0.44
RAB5C-207ENST00000550504 H7C1D1 291 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 FOXP2O15409 715 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 EIF5BO60841 1220 aaKnown RBP12.31□□□□□ -0.44
RAB5C-207ENST00000550504 EGFRP00533 1210 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 PLCG2P16885 1265 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 GNAT2P19087 354 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
RAB5C-207ENST00000550504 EPS15P42566 896 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 USP5P45974 858 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 CACNB3P54284 484 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 RHBDL3P58872 404 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 CDC42EP5Q6NZY7 148 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 SAMD7Q7Z3H4 446 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 TEX11Q8IYF3 940 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 USP26Q9BXU7 913 aa12.31□□□□□ -0.44
RAB5C-207ENST00000550504 TDRD3Q9H7E2 651 aaKnown RBP12.31□□□□□ -0.44
RAB5C-207ENST00000550504 UPF2Q9HAU5 1272 aaKnown RBP12.31□□□□□ -0.44
RAB5C-207ENST00000550504 CLRN2A0PK11 232 aa12.3□□□□□ -0.44
RAB5C-207ENST00000550504 GLTPD2A6NH11 291 aa12.3□□□□□ -0.44
RAB5C-207ENST00000550504 GSG1L2A8MUP6 293 aa12.3□□□□□ -0.44
RAB5C-207ENST00000550504 TDO2P48775 406 aa12.3□□□□□ -0.44
RAB5C-207ENST00000550504 PICALMQ13492 652 aa12.3□□□□□ -0.44
RAB5C-207ENST00000550504 KIF4BQ2VIQ3 1234 aa12.3□□□□□ -0.44
RAB5C-207ENST00000550504 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
RAB5C-207ENST00000550504 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
RAB5C-207ENST00000550504 IFNL3Q8IZI9 196 aa12.3□□□□□ -0.44
RAB5C-207ENST00000550504 TGFBRAP1Q8WUH2 860 aa12.3□□□□□ -0.44
RAB5C-207ENST00000550504 EPB41L4AQ9HCS5 686 aaPredicted RBP12.3□□□□□ -0.44
RAB5C-207ENST00000550504 RBM8AQ9Y5S9 174 aaKnown RBP12.3□□□□□ -0.44
RAB5C-207ENST00000550504 WNT10BO00744 389 aa12.29□□□□□ -0.44
RAB5C-207ENST00000550504 NBPF9Q3BBW0 867 aa12.29□□□□□ -0.44
RAB5C-207ENST00000550504 MTMR14Q8NCE2 650 aa12.29□□□□□ -0.44
RAB5C-207ENST00000550504 TRPM4Q8TD43 1214 aa12.29□□□□□ -0.44
RAB5C-207ENST00000550504 MAP4K1Q92918 833 aa12.29□□□□□ -0.44
RAB5C-207ENST00000550504 NACAP1Q9BZK3 213 aa12.29□□□□□ -0.44
RAB5C-207ENST00000550504 NAPBQ9H115 298 aa12.29□□□□□ -0.44
RAB5C-207ENST00000550504 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
RAB5C-207ENST00000550504 MYO1BO43795 1136 aa12.28□□□□□ -0.44
RAB5C-207ENST00000550504 WDHD1O75717 1129 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-207ENST00000550504 FGAP02671 866 aa12.28□□□□□ -0.44
RAB5C-207ENST00000550504 MMP14P50281 582 aa12.28□□□□□ -0.44
RAB5C-207ENST00000550504 NFIAQ12857 509 aa12.28□□□□□ -0.44
RAB5C-207ENST00000550504 SLC4A8Q2Y0W8 1093 aa12.28□□□□□ -0.44
RAB5C-207ENST00000550504 DDRGK1Q96HY6 314 aa12.28□□□□□ -0.44
RAB5C-207ENST00000550504 ZBED3Q96IU2 234 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-207ENST00000550504 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-207ENST00000550504 C22orf23Q9BZE7 217 aa12.28□□□□□ -0.44
RAB5C-207ENST00000550504 VEZTQ9HBM0 779 aa12.28□□□□□ -0.44
RAB5C-207ENST00000550504 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-207ENST00000550504 DDX4Q9NQI0 724 aaKnown RBP12.28□□□□□ -0.44
RAB5C-207ENST00000550504 TMOD2Q9NZR1 351 aa12.28□□□□□ -0.44
RAB5C-207ENST00000550504 ZNF70Q9UC06 446 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-207ENST00000550504 SAP30BPQ9UHR5 308 aaKnown RBP12.28□□□□□ -0.44
RAB5C-207ENST00000550504 RPAP1Q9BWH6 1393 aaPredicted RBP12.28□□□□□ -0.44
RAB5C-207ENST00000550504 ECM29Q5VYK3 1845 aa12.27□□□□□ -0.44
RAB5C-207ENST00000550504 CDK5RAP2Q96SN8 1893 aa12.27□□□□□ -0.44
RAB5C-207ENST00000550504 CYP2D7A0A087X1C5 515 aa12.27□□□□□ -0.45
RAB5C-207ENST00000550504 TCP10L2B9ZVM9 353 aa12.27□□□□□ -0.45
RAB5C-207ENST00000550504 MCCP23508 829 aa12.27□□□□□ -0.45
RAB5C-207ENST00000550504 HIRAP54198 1017 aaPredicted RBP12.27□□□□□ -0.45
RAB5C-207ENST00000550504 HAND2P61296 217 aa12.27□□□□□ -0.45
RAB5C-207ENST00000550504 TCP10Q12799 353 aa12.27□□□□□ -0.45
RAB5C-207ENST00000550504 ADARB2Q9NS39 739 aaKnown RBP12.27□□□□□ -0.45
RAB5C-207ENST00000550504 ATP8A2Q9NTI2 1148 aa12.27□□□□□ -0.45
RAB5C-207ENST00000550504 MCM9Q9NXL9 1143 aa12.27□□□□□ -0.45
RAB5C-207ENST00000550504 CTNNA3Q9UI47 895 aa12.27□□□□□ -0.45
RAB5C-207ENST00000550504 HACL1Q9UJ83 578 aa12.27□□□□□ -0.45
RAB5C-207ENST00000550504 SCAF8Q9UPN6 1271 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms