RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 GPR75-ASB3A0A0A6YYF3 556 aa27.4■■□□□ 1.98
BRF1-216ENST00000550208 BTDP43251 543 aa27.4■■□□□ 1.98
BRF1-216ENST00000550208 RASA3Q14644 834 aa27.4■■□□□ 1.98
BRF1-216ENST00000550208 TTC41PQ6P2S7 1318 aa27.4■■□□□ 1.98
BRF1-216ENST00000550208 IGSF3O75054 1194 aa27.39■■□□□ 1.98
BRF1-216ENST00000550208 MX1P20591 662 aa27.39■■□□□ 1.98
BRF1-216ENST00000550208 MAP3K12Q12852 859 aa27.39■■□□□ 1.98
BRF1-216ENST00000550208 CREBZFQ9NS37 354 aa27.39■■□□□ 1.98
BRF1-216ENST00000550208 TMOD2Q9NZR1 351 aa27.39■■□□□ 1.98
BRF1-216ENST00000550208 TRPM7Q96QT4 1865 aa27.38■■□□□ 1.97
BRF1-216ENST00000550208 CYP7A1P22680 504 aa27.38■■□□□ 1.97
BRF1-216ENST00000550208 ADGRA1Q86SQ6 560 aa27.38■■□□□ 1.97
BRF1-216ENST00000550208 MAGEB6Q8N7X4 407 aa27.38■■□□□ 1.97
BRF1-216ENST00000550208 PI4K2BQ8TCG2 481 aa27.37■■□□□ 1.97
BRF1-216ENST00000550208 NEFLP07196 543 aa27.36■■□□□ 1.97
BRF1-216ENST00000550208 TNFAIP1Q13829 316 aa27.36■■□□□ 1.97
BRF1-216ENST00000550208 STAP2Q9UGK3 403 aa27.36■■□□□ 1.97
BRF1-216ENST00000550208 PPP2R3BQ9Y5P8 575 aa27.36■■□□□ 1.97
BRF1-216ENST00000550208 ERC2O15083 957 aa27.35■■□□□ 1.97
BRF1-216ENST00000550208 MAP4K4O95819 1239 aaPredicted RBP27.35■■□□□ 1.97
BRF1-216ENST00000550208 TNNI2P48788 182 aa27.35■■□□□ 1.97
BRF1-216ENST00000550208 PDE1AP54750 535 aa27.35■■□□□ 1.97
BRF1-216ENST00000550208 RHBDL3P58872 404 aa27.35■■□□□ 1.97
BRF1-216ENST00000550208 NFIAQ12857 509 aa27.35■■□□□ 1.97
BRF1-216ENST00000550208 FKBP1CQ5VVH2 108 aa27.35■■□□□ 1.97
BRF1-216ENST00000550208 TMEM39BQ9GZU3 492 aa27.35■■□□□ 1.97
BRF1-216ENST00000550208 CNTNAP1P78357 1384 aa27.35■■□□□ 1.97
BRF1-216ENST00000550208 GLRX3O76003 335 aaKnown RBP27.34■■□□□ 1.97
BRF1-216ENST00000550208 NBPF12Q5TAG4 269 aaPredicted RBP27.34■■□□□ 1.97
BRF1-216ENST00000550208 SLC9C2Q5TAH2 1124 aa27.34■■□□□ 1.97
BRF1-216ENST00000550208 GBA2Q9HCG7 927 aaPredicted RBP27.34■■□□□ 1.97
BRF1-216ENST00000550208 AATFQ9NY61 560 aaKnown RBP eCLIP27.34■■□□□ 1.97
BRF1-216ENST00000550208 FAM198AQ9UFP1 575 aa27.34■■□□□ 1.97
BRF1-216ENST00000550208 PDE6AP16499 860 aa27.33■■□□□ 1.97
BRF1-216ENST00000550208 PPP4CP60510 307 aa27.33■■□□□ 1.97
BRF1-216ENST00000550208 TCP10Q12799 353 aa27.33■■□□□ 1.97
BRF1-216ENST00000550208 FAM83AQ86UY5 434 aa27.33■■□□□ 1.97
BRF1-216ENST00000550208 CDAN1Q8IWY9 1227 aa27.33■■□□□ 1.97
BRF1-216ENST00000550208 C2orf69Q8N8R5 385 aa27.33■■□□□ 1.97
BRF1-216ENST00000550208 TEPSINQ96N21 525 aa27.33■■□□□ 1.97
BRF1-216ENST00000550208 NOL10Q9BSC4 688 aaKnown RBP27.33■■□□□ 1.97
BRF1-216ENST00000550208 ABT1Q9ULW3 272 aaKnown RBP27.33■■□□□ 1.97
BRF1-216ENST00000550208 BAG3O95817 575 aa27.32■■□□□ 1.96
BRF1-216ENST00000550208 DYNLL1P63167 89 aaKnown RBP27.32■■□□□ 1.96
BRF1-216ENST00000550208 SLFNL1Q499Z3 407 aa27.32■■□□□ 1.96
BRF1-216ENST00000550208 ZFPM1Q8IX07 1006 aa27.32■■□□□ 1.96
BRF1-216ENST00000550208 IDI2Q9BXS1 227 aa27.32■■□□□ 1.96
BRF1-216ENST00000550208 TLL2Q9Y6L7 1015 aa27.32■■□□□ 1.96
BRF1-216ENST00000550208 DOCK2Q92608 1830 aa27.32■■□□□ 1.96
BRF1-216ENST00000550208 WDHD1O75717 1129 aaPredicted RBP27.31■■□□□ 1.96
BRF1-216ENST00000550208 NF2P35240 595 aa27.31■■□□□ 1.96
BRF1-216ENST00000550208 PRKG1Q13976 671 aa27.31■■□□□ 1.96
BRF1-216ENST00000550208 MOB2Q70IA6 237 aa27.31■■□□□ 1.96
BRF1-216ENST00000550208 PLEKHM2Q8IWE5 1019 aa27.31■■□□□ 1.96
BRF1-216ENST00000550208 MIGA1Q8NAN2 632 aa27.31■■□□□ 1.96
BRF1-216ENST00000550208 SH3RF3Q8TEJ3 882 aaPredicted RBP27.31■■□□□ 1.96
BRF1-216ENST00000550208 FAM151AQ8WW52 585 aa27.31■■□□□ 1.96
BRF1-216ENST00000550208 ZNF532Q9HCE3 1301 aa27.31■■□□□ 1.96
BRF1-216ENST00000550208 TCRBV5S4A2TA0A5A2 114 aa27.3■■□□□ 1.96
BRF1-216ENST00000550208 CHGBP05060 677 aa27.3■■□□□ 1.96
BRF1-216ENST00000550208 RGS3P49796 1198 aa27.3■■□□□ 1.96
BRF1-216ENST00000550208 SUPT20HL1Q3ZLR7 823 aa27.3■■□□□ 1.96
BRF1-216ENST00000550208 DDX4Q9NQI0 724 aaKnown RBP27.3■■□□□ 1.96
BRF1-216ENST00000550208 FZD1Q9UP38 647 aa27.3■■□□□ 1.96
BRF1-216ENST00000550208 MAST2Q6P0Q8 1798 aa27.3■■□□□ 1.96
BRF1-216ENST00000550208 ADD2P35612 726 aa27.29■■□□□ 1.96
BRF1-216ENST00000550208 TMED8Q6PL24 325 aaPredicted RBP27.29■■□□□ 1.96
BRF1-216ENST00000550208 SAPCD2Q86UD0 394 aa27.29■■□□□ 1.96
BRF1-216ENST00000550208 DNAJC5GQ8N7S2 189 aa27.29■■□□□ 1.96
BRF1-216ENST00000550208 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.29■■□□□ 1.96
BRF1-216ENST00000550208 PDE4AP27815 886 aa27.28■■□□□ 1.96
BRF1-216ENST00000550208 PICALMQ13492 652 aa27.28■■□□□ 1.96
BRF1-216ENST00000550208 TTLL12Q14166 644 aaPredicted RBP27.28■■□□□ 1.96
BRF1-216ENST00000550208 DEFB115Q30KQ5 88 aa27.28■■□□□ 1.96
BRF1-216ENST00000550208 TEX11Q8IYF3 940 aa27.28■■□□□ 1.96
BRF1-216ENST00000550208 KBTBD3Q8NAB2 608 aa27.28■■□□□ 1.96
BRF1-216ENST00000550208 MKRN1Q9UHC7 482 aaKnown RBP27.28■■□□□ 1.96
BRF1-216ENST00000550208 UBE2Q2LH0YL09 131 aa27.27■■□□□ 1.96
BRF1-216ENST00000550208 ENTPD3O75355 529 aa27.27■■□□□ 1.96
BRF1-216ENST00000550208 PLCG2P16885 1265 aa27.27■■□□□ 1.96
BRF1-216ENST00000550208 RFX7Q2KHR2 1363 aa27.26■■□□□ 1.95
BRF1-216ENST00000550208 HUNKP57058 714 aa27.26■■□□□ 1.95
BRF1-216ENST00000550208 MAGEB6P1A0A0J9YX57 407 aa27.25■■□□□ 1.95
BRF1-216ENST00000550208 RASSF10A6NK89 507 aa27.25■■□□□ 1.95
BRF1-216ENST00000550208 FKBP1BP68106 108 aa27.25■■□□□ 1.95
BRF1-216ENST00000550208 ZSCAN25Q6NSZ9 544 aa27.25■■□□□ 1.95
BRF1-216ENST00000550208 SH3BP5LQ7L8J4 393 aa27.25■■□□□ 1.95
BRF1-216ENST00000550208 TGFBRAP1Q8WUH2 860 aa27.25■■□□□ 1.95
BRF1-216ENST00000550208 OSBPL3Q9H4L5 887 aa27.25■■□□□ 1.95
BRF1-216ENST00000550208 ANGEL1Q9UNK9 670 aaKnown RBP27.25■■□□□ 1.95
BRF1-216ENST00000550208 SSC5DA1L4H1 1573 aa27.25■■□□□ 1.95
BRF1-216ENST00000550208 USP2O75604 605 aaPredicted RBP27.24■■□□□ 1.95
BRF1-216ENST00000550208 NPM3O75607 178 aaKnown RBP27.24■■□□□ 1.95
BRF1-216ENST00000550208 UBE3CQ15386 1083 aa27.24■■□□□ 1.95
BRF1-216ENST00000550208 RIOK1Q9BRS2 568 aaKnown RBP27.24■■□□□ 1.95
BRF1-216ENST00000550208 PPP1R12BO60237 982 aaPredicted RBP27.23■■□□□ 1.95
BRF1-216ENST00000550208 ARMC9Q7Z3E5 817 aa27.23■■□□□ 1.95
BRF1-216ENST00000550208 CCDC136Q96JN2 1154 aa27.23■■□□□ 1.95
BRF1-216ENST00000550208 DDTLA6NHG4 134 aaPredicted RBP27.22■■□□□ 1.95
BRF1-216ENST00000550208 RNF113AO15541 343 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms