RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 RASGRF1Q13972 1273 aa16.67■□□□□ 0.26
GCN1-206ENST00000549815 PKN2Q16513 984 aaKnown RBP16.67■□□□□ 0.26
GCN1-206ENST00000549815 CDC42EP5Q6NZY7 148 aa16.67■□□□□ 0.26
GCN1-206ENST00000549815 TMEM57Q8N5G2 664 aa16.67■□□□□ 0.26
GCN1-206ENST00000549815 SNCAIPQ9Y6H5 919 aa16.67■□□□□ 0.26
GCN1-206ENST00000549815 LDHBP07195 334 aaKnown RBP16.66■□□□□ 0.26
GCN1-206ENST00000549815 NFIAQ12857 509 aa16.66■□□□□ 0.26
GCN1-206ENST00000549815 ZKSCAN2Q63HK3 967 aa16.66■□□□□ 0.26
GCN1-206ENST00000549815 FAM151AQ8WW52 585 aa16.66■□□□□ 0.26
GCN1-206ENST00000549815 XAGE2Q96GT9 111 aa16.66■□□□□ 0.26
GCN1-206ENST00000549815 HPS5Q9UPZ3 1129 aa16.66■□□□□ 0.26
GCN1-206ENST00000549815 HTTP42858 3142 aa16.66■□□□□ 0.26
GCN1-206ENST00000549815 MYH2Q9UKX2 1941 aa16.66■□□□□ 0.26
GCN1-206ENST00000549815 SPDYE5A6NIY4 337 aa16.65■□□□□ 0.26
GCN1-206ENST00000549815 BRI3BPQ8WY22 251 aa16.65■□□□□ 0.26
GCN1-206ENST00000549815 FAM198AQ9UFP1 575 aa16.65■□□□□ 0.26
GCN1-206ENST00000549815 AKAP2Q9Y2D5 859 aa16.65■□□□□ 0.26
GCN1-206ENST00000549815 GAKO14976 1311 aa16.65■□□□□ 0.26
GCN1-206ENST00000549815 TNRC18O15417 2968 aaPredicted RBP16.64■□□□□ 0.25
GCN1-206ENST00000549815 MLLT1Q03111 559 aaPredicted RBP16.64■□□□□ 0.25
GCN1-206ENST00000549815 CRHR2Q13324 411 aa16.64■□□□□ 0.25
GCN1-206ENST00000549815 ZKSCAN4Q969J2 545 aaPredicted RBP16.64■□□□□ 0.25
GCN1-206ENST00000549815 HOOK2Q96ED9 719 aa16.64■□□□□ 0.25
GCN1-206ENST00000549815 WRNIP1Q96S55 665 aa16.64■□□□□ 0.25
GCN1-206ENST00000549815 CSADQ9Y600 493 aa16.64■□□□□ 0.25
GCN1-206ENST00000549815 RFX7Q2KHR2 1363 aa16.64■□□□□ 0.25
GCN1-206ENST00000549815 GTF2A2P52657 109 aa16.63■□□□□ 0.25
GCN1-206ENST00000549815 POLA2Q14181 598 aa16.63■□□□□ 0.25
GCN1-206ENST00000549815 DCAF15Q66K64 600 aa16.63■□□□□ 0.25
GCN1-206ENST00000549815 OTUD7BQ6GQQ9 843 aa16.63■□□□□ 0.25
GCN1-206ENST00000549815 FBXO46Q6PJ61 603 aaPredicted RBP16.63■□□□□ 0.25
GCN1-206ENST00000549815 ZGPATQ8N5A5 531 aaKnown RBP16.63■□□□□ 0.25
GCN1-206ENST00000549815 OTUD5Q96G74 571 aa16.63■□□□□ 0.25
GCN1-206ENST00000549815 FAM163AQ96GL9 167 aaPredicted RBP16.63■□□□□ 0.25
GCN1-206ENST00000549815 USP40Q9NVE5 1235 aa16.63■□□□□ 0.25
GCN1-206ENST00000549815 ZNF112Q9UJU3 913 aa16.63■□□□□ 0.25
GCN1-206ENST00000549815 ATRNL1Q5VV63 1379 aa16.63■□□□□ 0.25
GCN1-206ENST00000549815 CCL15-CCL14A0A0B4J2E2 113 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 SOX10P56693 466 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 TCP10Q12799 353 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 MVPQ14764 893 aaKnown RBP16.62■□□□□ 0.25
GCN1-206ENST00000549815 CCL15Q16663 113 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 MIGA2Q7L4E1 593 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 ERO1BQ86YB8 467 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 ZNF384Q8TF68 577 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 IDI2Q9BXS1 227 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 ZNF341Q9BYN7 854 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 ZBED9Q6R2W3 1325 aa16.62■□□□□ 0.25
GCN1-206ENST00000549815 AK9Q5TCS8 1911 aa16.61■□□□□ 0.25
GCN1-206ENST00000549815 INPP5BP32019 993 aa16.61■□□□□ 0.25
GCN1-206ENST00000549815 CAP1Q01518 475 aa16.61■□□□□ 0.25
GCN1-206ENST00000549815 FAM43AQ8N2R8 423 aa16.61■□□□□ 0.25
GCN1-206ENST00000549815 SSH3Q8TE77 659 aa16.61■□□□□ 0.25
GCN1-206ENST00000549815 NEUROD6Q96NK8 337 aa16.61■□□□□ 0.25
GCN1-206ENST00000549815 HMG20BQ9P0W2 317 aa16.61■□□□□ 0.25
GCN1-206ENST00000549815 ABCF2Q9UG63 623 aa16.61■□□□□ 0.25
GCN1-206ENST00000549815 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
GCN1-206ENST00000549815 IRF6O14896 467 aa16.6■□□□□ 0.25
GCN1-206ENST00000549815 ZBTB7BO15156 539 aaPredicted RBP16.6■□□□□ 0.25
GCN1-206ENST00000549815 RLBP1P12271 317 aa16.6■□□□□ 0.25
GCN1-206ENST00000549815 ARID4AP29374 1257 aaPredicted RBP16.6■□□□□ 0.25
GCN1-206ENST00000549815 ATP8B2P98198 1209 aa16.6■□□□□ 0.25
GCN1-206ENST00000549815 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.252e-7■■■■■ 28.1
GCN1-206ENST00000549815 PPIL2Q13356 520 aa16.6■□□□□ 0.25
GCN1-206ENST00000549815 OTOP1Q7RTM1 612 aa16.6■□□□□ 0.25
GCN1-206ENST00000549815 CENPFP49454 3210 aa16.6■□□□□ 0.25
GCN1-206ENST00000549815 ENTPD3O75355 529 aa16.59■□□□□ 0.25
GCN1-206ENST00000549815 RGS3P49796 1198 aa16.59■□□□□ 0.25
GCN1-206ENST00000549815 PPATQ06203 517 aa16.59■□□□□ 0.25
GCN1-206ENST00000549815 SPTY2D1Q68D10 685 aaPredicted RBP16.59■□□□□ 0.25
GCN1-206ENST00000549815 PI16Q6UXB8 463 aa16.59■□□□□ 0.25
GCN1-206ENST00000549815 SH3BP5LQ7L8J4 393 aa16.59■□□□□ 0.25
GCN1-206ENST00000549815 DZIP1Q86YF9 867 aaKnown RBP16.59■□□□□ 0.25
GCN1-206ENST00000549815 CD99L2Q8TCZ2 262 aa16.59■□□□□ 0.25
GCN1-206ENST00000549815 ERO1AQ96HE7 468 aa16.59■□□□□ 0.25
GCN1-206ENST00000549815 TRIM17Q9Y577 477 aa16.59■□□□□ 0.25
GCN1-206ENST00000549815 MROH7-TTC4A0A0A0MT08 1334 aa16.59■□□□□ 0.25
GCN1-206ENST00000549815 GPR75-ASB3A0A0A6YYF3 556 aa16.58■□□□□ 0.24
GCN1-206ENST00000549815 WDHD1O75717 1129 aaPredicted RBP16.58■□□□□ 0.24
GCN1-206ENST00000549815 CETPP11597 493 aa16.58■□□□□ 0.24
GCN1-206ENST00000549815 BTDP43251 543 aa16.58■□□□□ 0.24
GCN1-206ENST00000549815 RHBDL3P58872 404 aa16.58■□□□□ 0.24
GCN1-206ENST00000549815 SP3Q02447 781 aa16.58■□□□□ 0.24
GCN1-206ENST00000549815 MECOMQ03112 1051 aa16.58■□□□□ 0.24
GCN1-206ENST00000549815 TAF1CQ15572 869 aaPredicted RBP16.58■□□□□ 0.24
GCN1-206ENST00000549815 NOL9Q5SY16 702 aaKnown RBP16.58■□□□□ 0.24
GCN1-206ENST00000549815 ERICH6Q7L0X2 663 aa16.58■□□□□ 0.24
GCN1-206ENST00000549815 SPATA5Q8NB90 893 aa16.58■□□□□ 0.24
GCN1-206ENST00000549815 NSUN4Q96CB9 384 aaKnown RBP16.58■□□□□ 0.24
GCN1-206ENST00000549815 C1orf115Q9H7X2 142 aa16.58■□□□□ 0.24
GCN1-206ENST00000549815 GPR108Q9NPR9 543 aa16.58■□□□□ 0.24
GCN1-206ENST00000549815 DDX4Q9NQI0 724 aaKnown RBP16.58■□□□□ 0.24
GCN1-206ENST00000549815 PHF20L1A8MW92 1017 aa16.57■□□□□ 0.24
GCN1-206ENST00000549815 BTBD19C9JJ37 291 aa16.57■□□□□ 0.24
GCN1-206ENST00000549815 MCAMP43121 646 aa16.57■□□□□ 0.24
GCN1-206ENST00000549815 MAP3K10Q02779 954 aa16.57■□□□□ 0.24
GCN1-206ENST00000549815 SNAPC2Q13487 334 aa16.57■□□□□ 0.24
GCN1-206ENST00000549815 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
GCN1-206ENST00000549815 ZFYVE28Q9HCC9 887 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms