RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 LDLRAD1Q5T700 205 aa12.9□□□□□ -0.34
CCDC38-207ENST00000549752 FKBP1CQ5VVH2 108 aa12.9□□□□□ -0.34
CCDC38-207ENST00000549752 SLF2Q8IX21 1173 aa12.9□□□□□ -0.34
CCDC38-207ENST00000549752 ZIC5Q96T25 663 aa12.9□□□□□ -0.34
CCDC38-207ENST00000549752 RNF186Q9NXI6 227 aa12.9□□□□□ -0.34
CCDC38-207ENST00000549752 TSKSQ9UJT2 592 aa12.9□□□□□ -0.34
CCDC38-207ENST00000549752 PCDHAC2Q9Y5I4 1007 aa12.9□□□□□ -0.34
CCDC38-207ENST00000549752 DOCK2Q92608 1830 aa12.9□□□□□ -0.34
CCDC38-207ENST00000549752 PDS5AQ29RF7 1337 aaKnown RBP12.89□□□□□ -0.35
CCDC38-207ENST00000549752 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
CCDC38-207ENST00000549752 TRPA1O75762 1119 aa12.89□□□□□ -0.35
CCDC38-207ENST00000549752 ALDH1A1P00352 501 aa12.89□□□□□ -0.35
CCDC38-207ENST00000549752 LDHBP07195 334 aaKnown RBP12.89□□□□□ -0.35
CCDC38-207ENST00000549752 ZBTB48P10074 688 aaPredicted RBP12.89□□□□□ -0.35
CCDC38-207ENST00000549752 SPTY2D1Q68D10 685 aaPredicted RBP12.89□□□□□ -0.35
CCDC38-207ENST00000549752 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
CCDC38-207ENST00000549752 ANKRD13AQ8IZ07 590 aa12.89□□□□□ -0.35
CCDC38-207ENST00000549752 TMEM57Q8N5G2 664 aa12.89□□□□□ -0.35
CCDC38-207ENST00000549752 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
CCDC38-207ENST00000549752 TCP10L2B9ZVM9 353 aa12.88□□□□□ -0.35
CCDC38-207ENST00000549752 TM4SF4P48230 202 aa12.88□□□□□ -0.35
CCDC38-207ENST00000549752 GORABQ5T7V8 394 aa12.88□□□□□ -0.35
CCDC38-207ENST00000549752 NBPF12Q5TAG4 269 aaPredicted RBP12.88□□□□□ -0.35
CCDC38-207ENST00000549752 ITPRIPQ8IWB1 547 aa12.88□□□□□ -0.35
CCDC38-207ENST00000549752 SSC5DA1L4H1 1573 aa12.88□□□□□ -0.35
CCDC38-207ENST00000549752 A0A1B0GUL7 405 aa12.87□□□□□ -0.35
CCDC38-207ENST00000549752 PHKA1P46020 1223 aa12.87□□□□□ -0.35
CCDC38-207ENST00000549752 TFCP2Q12800 502 aa12.87□□□□□ -0.35
CCDC38-207ENST00000549752 PDAP1Q13442 181 aaKnown RBP12.87□□□□□ -0.35
CCDC38-207ENST00000549752 SPRYD7Q5W111 196 aa12.87□□□□□ -0.35
CCDC38-207ENST00000549752 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
CCDC38-207ENST00000549752 OTUD7BQ6GQQ9 843 aa12.87□□□□□ -0.35
CCDC38-207ENST00000549752 MYO5AQ9Y4I1 1855 aaKnown RBP12.87□□□□□ -0.35
CCDC38-207ENST00000549752 RPAP1Q9BWH6 1393 aaPredicted RBP12.86□□□□□ -0.35
CCDC38-207ENST00000549752 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
CCDC38-207ENST00000549752 TIMM10P62072 90 aa12.86□□□□□ -0.35
CCDC38-207ENST00000549752 OS9Q13438 667 aaPredicted RBP12.86□□□□□ -0.35
CCDC38-207ENST00000549752 GRIK5Q16478 980 aa12.86□□□□□ -0.35
CCDC38-207ENST00000549752 DCAF15Q66K64 600 aa12.86□□□□□ -0.35
CCDC38-207ENST00000549752 DZIP1Q86YF9 867 aaKnown RBP12.86□□□□□ -0.35
CCDC38-207ENST00000549752 XAGE2Q96GT9 111 aa12.86□□□□□ -0.35
CCDC38-207ENST00000549752 NEUROD6Q96NK8 337 aa12.86□□□□□ -0.35
CCDC38-207ENST00000549752 CHMP4BQ9H444 224 aaKnown RBP12.86□□□□□ -0.35
CCDC38-207ENST00000549752 WDR70Q9NW82 654 aa12.86□□□□□ -0.35
CCDC38-207ENST00000549752 CSADQ9Y600 493 aa12.86□□□□□ -0.35
CCDC38-207ENST00000549752 MAST2Q6P0Q8 1798 aa12.86□□□□□ -0.35
CCDC38-207ENST00000549752 PNMA6EA0A0J9YXQ4 647 aa12.85□□□□□ -0.35
CCDC38-207ENST00000549752 ATP8B2P98198 1209 aa12.85□□□□□ -0.35
CCDC38-207ENST00000549752 NOM1Q5C9Z4 860 aaKnown RBP12.85□□□□□ -0.35
CCDC38-207ENST00000549752 APOBEC3HQ6NTF7 200 aaKnown RBP12.85□□□□□ -0.35
CCDC38-207ENST00000549752 ABHD8Q96I13 439 aa12.85□□□□□ -0.35
CCDC38-207ENST00000549752 WNK4Q96J92 1243 aa12.85□□□□□ -0.35
CCDC38-207ENST00000549752 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
CCDC38-207ENST00000549752 TMEM39BQ9GZU3 492 aa12.85□□□□□ -0.35
CCDC38-207ENST00000549752 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
CCDC38-207ENST00000549752 TNNQ9UQP3 1299 aa12.85□□□□□ -0.35
CCDC38-207ENST00000549752 AOX1Q06278 1338 aa12.85□□□□□ -0.35
CCDC38-207ENST00000549752 UQCRFS1P1P0C7P4 283 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 PRDX5P30044 214 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 ADORA1P30542 326 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 MKRN3Q13064 507 aaKnown RBP12.84□□□□□ -0.35
CCDC38-207ENST00000549752 DGKZQ13574 1117 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 RASGRF1Q13972 1273 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 FAM151AQ8WW52 585 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 CFHR5Q9BXR6 569 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 GPR108Q9NPR9 543 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 ABCF2Q9UG63 623 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 DAGLAQ9Y4D2 1042 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 CDK5RAP2Q96SN8 1893 aa12.84□□□□□ -0.35
CCDC38-207ENST00000549752 FOCADQ5VW36 1801 aa12.83□□□□□ -0.35
CCDC38-207ENST00000549752 ZBTB7BO15156 539 aaPredicted RBP12.83□□□□□ -0.36
CCDC38-207ENST00000549752 SURF6O75683 361 aaKnown RBP12.83□□□□□ -0.36
CCDC38-207ENST00000549752 LDHCP07864 332 aa12.83□□□□□ -0.36
CCDC38-207ENST00000549752 GSTO1P78417 241 aa12.83□□□□□ -0.36
CCDC38-207ENST00000549752 ERICH6Q7L0X2 663 aa12.83□□□□□ -0.36
CCDC38-207ENST00000549752 CLMNQ96JQ2 1002 aa12.83□□□□□ -0.36
CCDC38-207ENST00000549752 FZD1Q9UP38 647 aa12.83□□□□□ -0.36
CCDC38-207ENST00000549752 IGSF3O75054 1194 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 WDHD1O75717 1129 aaPredicted RBP12.82□□□□□ -0.36
CCDC38-207ENST00000549752 MAP4K4O95819 1239 aaPredicted RBP12.82□□□□□ -0.36
CCDC38-207ENST00000549752 ARID4AP29374 1257 aaPredicted RBP12.82□□□□□ -0.36
CCDC38-207ENST00000549752 CACNB3P54284 484 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 DIXDC1Q155Q3 683 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 PKN2Q16513 984 aaKnown RBP12.82□□□□□ -0.36
CCDC38-207ENST00000549752 CCDC158Q5M9N0 1113 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 CDC42EP5Q6NZY7 148 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 CTU1Q7Z7A3 348 aaKnown RBP12.82□□□□□ -0.36
CCDC38-207ENST00000549752 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 ERC1Q8IUD2 1116 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 SPATA5Q8NB90 893 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
CCDC38-207ENST00000549752 ZNF341Q9BYN7 854 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 MCOLN1Q9GZU1 580 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 USP40Q9NVE5 1235 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
CCDC38-207ENST00000549752 ATAD5Q96QE3 1844 aa12.82□□□□□ -0.36
CCDC38-207ENST00000549752 DOCK1Q14185 1865 aa12.81□□□□□ -0.36
CCDC38-207ENST00000549752 GTF2A2P52657 109 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms