RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 PRELPP51888 382 aa20.77■□□□□ 0.92
LETMD1-220ENST00000549686 NECTIN1Q15223 517 aa20.77■□□□□ 0.92
LETMD1-220ENST00000549686 VPS53Q5VIR6 699 aa20.77■□□□□ 0.92
LETMD1-220ENST00000549686 KIAA0825Q8IV33 1275 aa20.77■□□□□ 0.92
LETMD1-220ENST00000549686 KCNB2Q92953 911 aa20.77■□□□□ 0.92
LETMD1-220ENST00000549686 IL17RAQ96F46 866 aa20.77■□□□□ 0.92
LETMD1-220ENST00000549686 DDRGK1Q96HY6 314 aa20.77■□□□□ 0.92
LETMD1-220ENST00000549686 ZDHHC15Q96MV8 337 aa20.77■□□□□ 0.92
LETMD1-220ENST00000549686 SLC4A4Q9Y6R1 1079 aa20.77■□□□□ 0.92
LETMD1-220ENST00000549686 MYO5AQ9Y4I1 1855 aaKnown RBP20.77■□□□□ 0.92
LETMD1-220ENST00000549686 PSME4Q14997 1843 aa20.76■□□□□ 0.91
LETMD1-220ENST00000549686 APPP05067 770 aa20.76■□□□□ 0.91
LETMD1-220ENST00000549686 CRKP46108 304 aa20.76■□□□□ 0.91
LETMD1-220ENST00000549686 ATP8A2Q9NTI2 1148 aa20.76■□□□□ 0.91
LETMD1-220ENST00000549686 DAGLAQ9Y4D2 1042 aa20.76■□□□□ 0.91
LETMD1-220ENST00000549686 DYNLL1P63167 89 aaKnown RBP20.75■□□□□ 0.91
LETMD1-220ENST00000549686 CREB3L3Q68CJ9 461 aa20.75■□□□□ 0.91
LETMD1-220ENST00000549686 DPF2Q92785 391 aa20.75■□□□□ 0.91
LETMD1-220ENST00000549686 RBM19Q9Y4C8 960 aaKnown RBP20.75■□□□□ 0.91
LETMD1-220ENST00000549686 GSG1L2A8MUP6 293 aa20.74■□□□□ 0.91
LETMD1-220ENST00000549686 FOXP2O15409 715 aa20.74■□□□□ 0.91
LETMD1-220ENST00000549686 FGAP02671 866 aa20.74■□□□□ 0.91
LETMD1-220ENST00000549686 USP17L8P0C7I0 530 aa20.74■□□□□ 0.91
LETMD1-220ENST00000549686 KRT32Q14532 448 aa20.74■□□□□ 0.91
LETMD1-220ENST00000549686 IMMTQ16891 758 aaKnown RBP20.74■□□□□ 0.91
LETMD1-220ENST00000549686 TSGA10IPQ3SY00 556 aa20.74■□□□□ 0.91
LETMD1-220ENST00000549686 IFNL3Q8IZI9 196 aa20.74■□□□□ 0.91
LETMD1-220ENST00000549686 NAPBQ9H115 298 aa20.74■□□□□ 0.91
LETMD1-220ENST00000549686 ZC3H4Q9UPT8 1303 aaKnown RBP20.74■□□□□ 0.91
LETMD1-220ENST00000549686 SLC27A2O14975 620 aa20.73■□□□□ 0.91
LETMD1-220ENST00000549686 SCNN1DP51172 638 aa20.73■□□□□ 0.91
LETMD1-220ENST00000549686 RNF181Q9P0P0 153 aa20.73■□□□□ 0.91
LETMD1-220ENST00000549686 ZNF646O15015 1829 aaPredicted RBP20.73■□□□□ 0.91
LETMD1-220ENST00000549686 TDO2P48775 406 aa20.72■□□□□ 0.91
LETMD1-220ENST00000549686 GPC2Q8N158 579 aa20.72■□□□□ 0.91
LETMD1-220ENST00000549686 MTMR14Q8NCE2 650 aa20.72■□□□□ 0.91
LETMD1-220ENST00000549686 ZNF213O14771 459 aa20.71■□□□□ 0.91
LETMD1-220ENST00000549686 PRKAB2O43741 272 aa20.71■□□□□ 0.91
LETMD1-220ENST00000549686 USP5P45974 858 aa20.71■□□□□ 0.91
LETMD1-220ENST00000549686 RBM5P52756 815 aaKnown RBP eCLIP20.71■□□□□ 0.91
LETMD1-220ENST00000549686 RHBDL3P58872 404 aa20.71■□□□□ 0.91
LETMD1-220ENST00000549686 RABEP1Q15276 862 aa20.71■□□□□ 0.91
LETMD1-220ENST00000549686 CFAP100Q494V2 611 aa20.71■□□□□ 0.91
LETMD1-220ENST00000549686 C9orf131Q5VYM1 1079 aa20.71■□□□□ 0.91
LETMD1-220ENST00000549686 APOBEC3HQ6NTF7 200 aaKnown RBP20.71■□□□□ 0.91
LETMD1-220ENST00000549686 TEX11Q8IYF3 940 aa20.71■□□□□ 0.91
LETMD1-220ENST00000549686 SH3RF3Q8TEJ3 882 aaPredicted RBP20.71■□□□□ 0.91
LETMD1-220ENST00000549686 ZBTB12Q9Y330 459 aaPredicted RBP20.71■□□□□ 0.91
LETMD1-220ENST00000549686 SNX14Q9Y5W7 946 aa20.71■□□□□ 0.91
LETMD1-220ENST00000549686 PSMA5P28066 241 aa20.7■□□□□ 0.9
LETMD1-220ENST00000549686 ANP32AP39687 249 aaKnown RBP20.7■□□□□ 0.9
LETMD1-220ENST00000549686 ZNF280AP59817 542 aaPredicted RBP20.7■□□□□ 0.9
LETMD1-220ENST00000549686 AMOTL1Q8IY63 956 aa20.7■□□□□ 0.9
LETMD1-220ENST00000549686 SDR42E1Q8WUS8 393 aa20.7■□□□□ 0.9
LETMD1-220ENST00000549686 TM6SF1Q9BZW5 370 aa20.7■□□□□ 0.9
LETMD1-220ENST00000549686 EPB41L4AQ9HCS5 686 aaPredicted RBP20.7■□□□□ 0.9
LETMD1-220ENST00000549686 ARPP21Q9UBL0 812 aaPredicted RBP20.7■□□□□ 0.9
LETMD1-220ENST00000549686 ZNF541Q9H0D2 1346 aa20.7■□□□□ 0.9
LETMD1-220ENST00000549686 MYH2Q9UKX2 1941 aa20.69■□□□□ 0.9
LETMD1-220ENST00000549686 NPM3O75607 178 aaKnown RBP20.69■□□□□ 0.9
LETMD1-220ENST00000549686 CYP21A2P08686 494 aa20.69■□□□□ 0.9
LETMD1-220ENST00000549686 DLGAP5Q15398 846 aa20.69■□□□□ 0.9
LETMD1-220ENST00000549686 KIF2CQ99661 725 aa20.69■□□□□ 0.9
LETMD1-220ENST00000549686 DCP1AQ9NPI6 582 aaPredicted RBP20.69■□□□□ 0.9
LETMD1-220ENST00000549686 USP40Q9NVE5 1235 aa20.69■□□□□ 0.9
LETMD1-220ENST00000549686 PALD1Q9ULE6 856 aa20.69■□□□□ 0.9
LETMD1-220ENST00000549686 GJA3Q9Y6H8 435 aa20.69■□□□□ 0.9
LETMD1-220ENST00000549686 GOLGB1Q14789 3259 aaKnown RBP20.68■□□□□ 0.9
LETMD1-220ENST00000549686 GMPSP49915 693 aaPredicted RBP20.68■□□□□ 0.9
LETMD1-220ENST00000549686 SBK1Q52WX2 424 aa20.68■□□□□ 0.9
LETMD1-220ENST00000549686 CDC42EP5Q6NZY7 148 aa20.68■□□□□ 0.9
LETMD1-220ENST00000549686 RASEFQ8IZ41 740 aa20.68■□□□□ 0.9
LETMD1-220ENST00000549686 DICER1Q9UPY3 1922 aaKnown RBP20.68■□□□□ 0.9
LETMD1-220ENST00000549686 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
LETMD1-220ENST00000549686 SPDYE2BA6NHP3 402 aa20.67■□□□□ 0.9
LETMD1-220ENST00000549686 HMGB1P09429 215 aaKnown RBP20.67■□□□□ 0.9
LETMD1-220ENST00000549686 SPDYE6P0CI01 402 aa20.67■□□□□ 0.9
LETMD1-220ENST00000549686 PCP11498 1178 aaKnown RBP20.67■□□□□ 0.9
LETMD1-220ENST00000549686 NT5C2P49902 561 aa20.67■□□□□ 0.9
LETMD1-220ENST00000549686 TMOD2Q9NZR1 351 aa20.67■□□□□ 0.9
LETMD1-220ENST00000549686 MKRN1Q9UHC7 482 aaKnown RBP20.67■□□□□ 0.9
LETMD1-220ENST00000549686 ANAPC4Q9UJX5 808 aa20.67■□□□□ 0.9
LETMD1-220ENST00000549686 MYO1BO43795 1136 aa20.66■□□□□ 0.9
LETMD1-220ENST00000549686 SLC3A2P08195 630 aaKnown RBP20.66■□□□□ 0.9
LETMD1-220ENST00000549686 TGFBRAP1Q8WUH2 860 aa20.66■□□□□ 0.9
LETMD1-220ENST00000549686 IDI2Q9BXS1 227 aa20.66■□□□□ 0.9
LETMD1-220ENST00000549686 RNF41Q9H4P4 317 aaPredicted RBP20.66■□□□□ 0.9
LETMD1-220ENST00000549686 MYOZ2Q9NPC6 264 aa20.66■□□□□ 0.9
LETMD1-220ENST00000549686 FLT1P17948 1338 aa20.65■□□□□ 0.9
LETMD1-220ENST00000549686 H7C1D1 291 aa20.65■□□□□ 0.9
LETMD1-220ENST00000549686 PPARAQ07869 468 aa20.65■□□□□ 0.9
LETMD1-220ENST00000549686 DPY19L2Q6NUT2 758 aa20.65■□□□□ 0.9
LETMD1-220ENST00000549686 ZBED3Q96IU2 234 aaPredicted RBP20.65■□□□□ 0.9
LETMD1-220ENST00000549686 MCM9Q9NXL9 1143 aa20.65■□□□□ 0.9
LETMD1-220ENST00000549686 CNOT7Q9UIV1 285 aaKnown RBP20.65■□□□□ 0.9
LETMD1-220ENST00000549686 TAOK2Q9UL54 1235 aa20.65■□□□□ 0.9
LETMD1-220ENST00000549686 SBF1O95248 1867 aa20.64■□□□□ 0.9
LETMD1-220ENST00000549686 WDHD1O75717 1129 aaPredicted RBP20.64■□□□□ 0.89
LETMD1-220ENST00000549686 FKBP1CQ5VVH2 108 aa20.64■□□□□ 0.89
LETMD1-220ENST00000549686 CTR9Q6PD62 1173 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms