RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 XKR5Q6UX68 686 aa7.09□□□□□ -1.27
SNRPF-202ENST00000549580 SIAH1Q8IUQ4 282 aa7.09□□□□□ -1.27
SNRPF-202ENST00000549580 LRRN4CLQ8ND94 238 aa7.09□□□□□ -1.27
SNRPF-202ENST00000549580 MISP3Q96FF7 219 aa7.09□□□□□ -1.27
SNRPF-202ENST00000549580 LGR6Q9HBX8 967 aa7.09□□□□□ -1.27
SNRPF-202ENST00000549580 LATS2Q9NRM7 1088 aa7.09□□□□□ -1.27
SNRPF-202ENST00000549580 LMCD1Q9NZU5 365 aa7.09□□□□□ -1.27
SNRPF-202ENST00000549580 SOWAHDA6NJG2 315 aa7.08□□□□□ -1.28
SNRPF-202ENST00000549580 DYNC1LI2O43237 492 aaPredicted RBP7.08□□□□□ -1.28
SNRPF-202ENST00000549580 TSPAN15O95858 294 aa7.08□□□□□ -1.28
SNRPF-202ENST00000549580 CD8BP10966 210 aa7.08□□□□□ -1.28
SNRPF-202ENST00000549580 ADH5P11766 374 aa7.08□□□□□ -1.28
SNRPF-202ENST00000549580 LRRC56Q8IYG6 542 aaPredicted RBP7.08□□□□□ -1.28
SNRPF-202ENST00000549580 ZNF428Q96B54 188 aa7.08□□□□□ -1.28
SNRPF-202ENST00000549580 SOX17Q9H6I2 414 aaPredicted RBP7.08□□□□□ -1.28
SNRPF-202ENST00000549580 JAG2Q9Y219 1238 aa7.08□□□□□ -1.28
SNRPF-202ENST00000549580 PDGFAP04085 211 aa7.07□□□□□ -1.28
SNRPF-202ENST00000549580 RAP1GAPP47736 663 aa7.07□□□□□ -1.28
SNRPF-202ENST00000549580 SERPINB4P48594 390 aa7.07□□□□□ -1.28
SNRPF-202ENST00000549580 MAP7Q14244 749 aa7.07□□□□□ -1.28
SNRPF-202ENST00000549580 SEZ6L2Q6UXD5 910 aa7.07□□□□□ -1.28
SNRPF-202ENST00000549580 KRTAP9-8Q9BYQ0 159 aa7.07□□□□□ -1.28
SNRPF-202ENST00000549580 NRSN2Q9GZP1 204 aa7.07□□□□□ -1.28
SNRPF-202ENST00000549580 SEMA6CQ9H3T2 930 aa7.07□□□□□ -1.28
SNRPF-202ENST00000549580 LRRC10BA6NIK2 292 aa7.06□□□□□ -1.28
SNRPF-202ENST00000549580 RBM25P49756 843 aaKnown RBP7.06□□□□□ -1.28
SNRPF-202ENST00000549580 DYMQ7RTS9 669 aa7.06□□□□□ -1.28
SNRPF-202ENST00000549580 ZSCAN18Q8TBC5 510 aaPredicted RBP7.06□□□□□ -1.28
SNRPF-202ENST00000549580 C1GALT1Q9NS00 363 aa7.06□□□□□ -1.28
SNRPF-202ENST00000549580 FAM105AQ9NUU6 356 aa7.06□□□□□ -1.28
SNRPF-202ENST00000549580 ECEL1O95672 775 aa7.05□□□□□ -1.28
SNRPF-202ENST00000549580 PEAR1Q5VY43 1037 aaPredicted RBP7.05□□□□□ -1.28
SNRPF-202ENST00000549580 DNAJC14Q6Y2X3 702 aaPredicted RBP7.05□□□□□ -1.28
SNRPF-202ENST00000549580 EGFL7Q9UHF1 273 aa7.05□□□□□ -1.28
SNRPF-202ENST00000549580 FOXD3Q9UJU5 478 aaPredicted RBP7.05□□□□□ -1.28
SNRPF-202ENST00000549580 ZNF503-AS2A6NEH8 195 aa7.04□□□□□ -1.28
SNRPF-202ENST00000549580 ZSCAN22P10073 491 aaPredicted RBP7.04□□□□□ -1.28
SNRPF-202ENST00000549580 ERCC3P19447 782 aa7.04□□□□□ -1.28
SNRPF-202ENST00000549580 MAOBP27338 520 aa7.04□□□□□ -1.28
SNRPF-202ENST00000549580 CD96P40200 585 aa7.04□□□□□ -1.28
SNRPF-202ENST00000549580 AKAP4Q5JQC9 854 aa7.04□□□□□ -1.28
SNRPF-202ENST00000549580 OGFOD3Q6PK18 319 aa7.04□□□□□ -1.28
SNRPF-202ENST00000549580 ACSS3Q9H6R3 686 aa7.04□□□□□ -1.28
SNRPF-202ENST00000549580 ZNF423Q2M1K9 1284 aa7.03□□□□□ -1.28
SNRPF-202ENST00000549580 NOM1Q5C9Z4 860 aaKnown RBP7.03□□□□□ -1.28
SNRPF-202ENST00000549580 PLD6Q8N2A8 252 aaKnown RBP7.03□□□□□ -1.28
SNRPF-202ENST00000549580 FLAD1Q8NFF5 587 aa7.03□□□□□ -1.28
SNRPF-202ENST00000549580 PMEPA1Q969W9 287 aa7.03□□□□□ -1.28
SNRPF-202ENST00000549580 BHLHE41Q9C0J9 482 aaPredicted RBP7.03□□□□□ -1.28
SNRPF-202ENST00000549580 POLIQ9UNA4 740 aa7.03□□□□□ -1.28
SNRPF-202ENST00000549580 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.02□□□□□ -1.29
SNRPF-202ENST00000549580 RBM47A0AV96 593 aaKnown RBP7.02□□□□□ -1.29
SNRPF-202ENST00000549580 E9PSI1 815 aa7.02□□□□□ -1.29
SNRPF-202ENST00000549580 PHACTR2O75167 634 aa7.02□□□□□ -1.29
SNRPF-202ENST00000549580 TNFRSF21O75509 655 aa7.02□□□□□ -1.29
SNRPF-202ENST00000549580 POLR3DP05423 398 aaPredicted RBP7.02□□□□□ -1.29
SNRPF-202ENST00000549580 ECM1Q16610 540 aa7.02□□□□□ -1.29
SNRPF-202ENST00000549580 PI4K2BQ8TCG2 481 aa7.02□□□□□ -1.29
SNRPF-202ENST00000549580 U3KQE9 123 aa7.02□□□□□ -1.29
SNRPF-202ENST00000549580 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.01□□□□□ -1.29
SNRPF-202ENST00000549580 RPLP1P05386 114 aaKnown RBP7.01□□□□□ -1.29
SNRPF-202ENST00000549580 MPSTP25325 297 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 MZF1P28698 734 aaPredicted RBP7.01□□□□□ -1.29
SNRPF-202ENST00000549580 ASPAP45381 313 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 EIF1AXP47813 144 aaKnown RBP7.01□□□□□ -1.29
SNRPF-202ENST00000549580 MTMR3Q13615 1198 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 MLANAQ16655 118 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 ZSWIM9Q86XI8 627 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 FAM181AQ8N9Y4 354 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 TTC16Q8NEE8 873 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 PPP1R16BQ96T49 567 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 GSX1Q9H4S2 264 aaPredicted RBP7.01□□□□□ -1.29
SNRPF-202ENST00000549580 FAM53CQ9NYF3 392 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 CRIM1Q9NZV1 1036 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 AP4E1Q9UPM8 1137 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 DAGLAQ9Y4D2 1042 aa7.01□□□□□ -1.29
SNRPF-202ENST00000549580 ICMTO60725 284 aa7□□□□□ -1.29
SNRPF-202ENST00000549580 EDN3P14138 238 aa7□□□□□ -1.29
SNRPF-202ENST00000549580 PCSK2P16519 638 aa7□□□□□ -1.29
SNRPF-202ENST00000549580 PRKCQQ04759 706 aa7□□□□□ -1.29
SNRPF-202ENST00000549580 SPRED3Q2MJR0 410 aa7□□□□□ -1.29
SNRPF-202ENST00000549580 NETO1Q8TDF5 533 aa7□□□□□ -1.29
SNRPF-202ENST00000549580 VAV3Q9UKW4 847 aa7□□□□□ -1.29
SNRPF-202ENST00000549580 KRT1P04264 644 aa6.99□□□□□ -1.29
SNRPF-202ENST00000549580 PCDH1Q08174 1060 aa6.99□□□□□ -1.29
SNRPF-202ENST00000549580 POU4F3Q15319 338 aa6.99□□□□□ -1.29
SNRPF-202ENST00000549580 HELQQ8TDG4 1101 aa6.99□□□□□ -1.29
SNRPF-202ENST00000549580 RAD18Q9NS91 495 aa6.99□□□□□ -1.29
SNRPF-202ENST00000549580 ANKLE2Q86XL3 938 aa6.98□□□□□ -1.29
SNRPF-202ENST00000549580 GTF3C2Q8WUA4 911 aaPredicted RBP6.98□□□□□ -1.29
SNRPF-202ENST00000549580 TRIM56Q9BRZ2 755 aaKnown RBP6.98□□□□□ -1.29
SNRPF-202ENST00000549580 BIN2Q9UBW5 565 aaPredicted RBP6.98□□□□□ -1.29
SNRPF-202ENST00000549580 A0A096LPE4 126 aa6.97□□□□□ -1.29
SNRPF-202ENST00000549580 A0A1W2PPZ6 126 aa6.97□□□□□ -1.29
SNRPF-202ENST00000549580 UNCXA6NJT0 531 aa6.97□□□□□ -1.29
SNRPF-202ENST00000549580 ABL1P00519 1130 aa6.97□□□□□ -1.29
SNRPF-202ENST00000549580 GRIA4P48058 902 aa6.97□□□□□ -1.29
SNRPF-202ENST00000549580 CDK5R2Q13319 367 aa6.97□□□□□ -1.29
SNRPF-202ENST00000549580 ZNF211Q13398 564 aaPredicted RBP6.97□□□□□ -1.29
SNRPF-202ENST00000549580 AMIGO3Q86WK7 504 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms