RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 GPR75-ASB3A0A0A6YYF3 556 aa21.5■■□□□ 1.03
RAPGEF3-220ENST00000549347 IDH1O75874 414 aaKnown RBP21.5■■□□□ 1.03
RAPGEF3-220ENST00000549347 NEFLP07196 543 aa21.5■■□□□ 1.03
RAPGEF3-220ENST00000549347 FKBP1CQ5VVH2 108 aa21.5■■□□□ 1.03
RAPGEF3-220ENST00000549347 B4GALNT3Q6L9W6 998 aa21.5■■□□□ 1.03
RAPGEF3-220ENST00000549347 CDC42EP5Q6NZY7 148 aa21.5■■□□□ 1.03
RAPGEF3-220ENST00000549347 DLK2Q6UY11 383 aa21.5■■□□□ 1.03
RAPGEF3-220ENST00000549347 EDC3Q96F86 508 aaKnown RBP21.5■■□□□ 1.03
RAPGEF3-220ENST00000549347 CREBZFQ9NS37 354 aa21.5■■□□□ 1.03
RAPGEF3-220ENST00000549347 TMOD2Q9NZR1 351 aa21.5■■□□□ 1.03
RAPGEF3-220ENST00000549347 TMEM88BA6NKF7 163 aa21.49■■□□□ 1.03
RAPGEF3-220ENST00000549347 ERC2O15083 957 aa21.49■■□□□ 1.03
RAPGEF3-220ENST00000549347 GLRX3O76003 335 aaKnown RBP21.49■■□□□ 1.03
RAPGEF3-220ENST00000549347 BTDP43251 543 aa21.49■■□□□ 1.03
RAPGEF3-220ENST00000549347 MAP3K12Q12852 859 aa21.49■■□□□ 1.03
RAPGEF3-220ENST00000549347 CST9Q5W186 159 aa21.49■■□□□ 1.03
RAPGEF3-220ENST00000549347 DEFB129Q9H1M3 183 aa21.49■■□□□ 1.03
RAPGEF3-220ENST00000549347 STAP2Q9UGK3 403 aa21.49■■□□□ 1.03
RAPGEF3-220ENST00000549347 RPAP1Q9BWH6 1393 aaPredicted RBP21.48■■□□□ 1.03
RAPGEF3-220ENST00000549347 SSC5DA1L4H1 1573 aa21.48■■□□□ 1.03
RAPGEF3-220ENST00000549347 CELF2O95319 508 aaKnown RBP21.48■■□□□ 1.03
RAPGEF3-220ENST00000549347 CNTNAP1P78357 1384 aa21.48■■□□□ 1.03
RAPGEF3-220ENST00000549347 TNNI2P48788 182 aa21.47■■□□□ 1.03
RAPGEF3-220ENST00000549347 CACNB3P54284 484 aa21.47■■□□□ 1.03
RAPGEF3-220ENST00000549347 PDE1AP54750 535 aa21.47■■□□□ 1.03
RAPGEF3-220ENST00000549347 RASA3Q14644 834 aa21.47■■□□□ 1.03
RAPGEF3-220ENST00000549347 ADGRA1Q86SQ6 560 aa21.47■■□□□ 1.03
RAPGEF3-220ENST00000549347 FAM83AQ86UY5 434 aa21.47■■□□□ 1.03
RAPGEF3-220ENST00000549347 ZNF408Q9H9D4 720 aa21.47■■□□□ 1.03
RAPGEF3-220ENST00000549347 TCP10L2B9ZVM9 353 aa21.46■■□□□ 1.03
RAPGEF3-220ENST00000549347 MAP4K4O95819 1239 aaPredicted RBP21.46■■□□□ 1.03
RAPGEF3-220ENST00000549347 RHBDL3P58872 404 aa21.46■■□□□ 1.03
RAPGEF3-220ENST00000549347 MAGEB6Q8N7X4 407 aa21.46■■□□□ 1.03
RAPGEF3-220ENST00000549347 USP40Q9NVE5 1235 aa21.46■■□□□ 1.03
RAPGEF3-220ENST00000549347 PDE6AP16499 860 aa21.45■■□□□ 1.02
RAPGEF3-220ENST00000549347 CYP7A1P22680 504 aa21.45■■□□□ 1.02
RAPGEF3-220ENST00000549347 IDI2Q9BXS1 227 aa21.45■■□□□ 1.02
RAPGEF3-220ENST00000549347 PPP4CP60510 307 aa21.44■■□□□ 1.02
RAPGEF3-220ENST00000549347 NFIAQ12857 509 aa21.44■■□□□ 1.02
RAPGEF3-220ENST00000549347 PRAMEF18Q5VWM3 479 aa21.44■■□□□ 1.02
RAPGEF3-220ENST00000549347 TEPSINQ96N21 525 aa21.44■■□□□ 1.02
RAPGEF3-220ENST00000549347 NOL10Q9BSC4 688 aaKnown RBP21.44■■□□□ 1.02
RAPGEF3-220ENST00000549347 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.44■■□□□ 1.02
RAPGEF3-220ENST00000549347 TCRBV5S4A2TA0A5A2 114 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 WDHD1O75717 1129 aaPredicted RBP21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 BAG3O95817 575 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 PLCG2P16885 1265 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 NF2P35240 595 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 ADD2P35612 726 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 HTRA3P83110 453 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 SLC9C2Q5TAH2 1124 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 KBTBD3Q8NAB2 608 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 OSBPL3Q9H4L5 887 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 GBA2Q9HCG7 927 aaPredicted RBP21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 AATFQ9NY61 560 aaKnown RBP eCLIP21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 FAM198AQ9UFP1 575 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 TLL2Q9Y6L7 1015 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 COL2A1P02458 1487 aaPredicted RBP21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 DDX60LQ5H9U9 1706 aaKnown RBP21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 OTOFQ9HC10 1997 aa21.43■■□□□ 1.02
RAPGEF3-220ENST00000549347 NPM3O75607 178 aaKnown RBP21.42■■□□□ 1.02
RAPGEF3-220ENST00000549347 FKBP1BP68106 108 aa21.42■■□□□ 1.02
RAPGEF3-220ENST00000549347 CERS3Q8IU89 383 aa21.42■■□□□ 1.02
RAPGEF3-220ENST00000549347 PLEKHM2Q8IWE5 1019 aa21.42■■□□□ 1.02
RAPGEF3-220ENST00000549347 FAM151AQ8WW52 585 aa21.42■■□□□ 1.02
RAPGEF3-220ENST00000549347 TMEM39BQ9GZU3 492 aa21.42■■□□□ 1.02
RAPGEF3-220ENST00000549347 AK9Q5TCS8 1911 aa21.41■■□□□ 1.02
RAPGEF3-220ENST00000549347 ZNF532Q9HCE3 1301 aa21.41■■□□□ 1.02
RAPGEF3-220ENST00000549347 ENTPD3O75355 529 aa21.41■■□□□ 1.02
RAPGEF3-220ENST00000549347 CENPQQ7L2Z9 268 aaPredicted RBP21.41■■□□□ 1.02
RAPGEF3-220ENST00000549347 SAPCD2Q86UD0 394 aa21.41■■□□□ 1.02
RAPGEF3-220ENST00000549347 CDAN1Q8IWY9 1227 aa21.41■■□□□ 1.02
RAPGEF3-220ENST00000549347 C2orf69Q8N8R5 385 aa21.41■■□□□ 1.02
RAPGEF3-220ENST00000549347 ABT1Q9ULW3 272 aaKnown RBP21.41■■□□□ 1.02
RAPGEF3-220ENST00000549347 NAV1Q8NEY1 1877 aa21.41■■□□□ 1.02
RAPGEF3-220ENST00000549347 THSD7BQ9C0I4 1608 aa21.4■■□□□ 1.02
RAPGEF3-220ENST00000549347 RASSF10A6NK89 507 aa21.4■■□□□ 1.02
RAPGEF3-220ENST00000549347 RGS3P49796 1198 aa21.4■■□□□ 1.02
RAPGEF3-220ENST00000549347 UBE3CQ15386 1083 aa21.4■■□□□ 1.02
RAPGEF3-220ENST00000549347 SUPT20HL1Q3ZLR7 823 aa21.4■■□□□ 1.02
RAPGEF3-220ENST00000549347 NBPF12Q5TAG4 269 aaPredicted RBP21.4■■□□□ 1.02
RAPGEF3-220ENST00000549347 ZSCAN25Q6NSZ9 544 aa21.4■■□□□ 1.02
RAPGEF3-220ENST00000549347 TEX11Q8IYF3 940 aa21.4■■□□□ 1.02
RAPGEF3-220ENST00000549347 SH3RF3Q8TEJ3 882 aaPredicted RBP21.4■■□□□ 1.02
RAPGEF3-220ENST00000549347 DDX4Q9NQI0 724 aaKnown RBP21.4■■□□□ 1.02
RAPGEF3-220ENST00000549347 ATRNL1Q5VV63 1379 aa21.39■■□□□ 1.02
RAPGEF3-220ENST00000549347 PDE4AP27815 886 aa21.39■■□□□ 1.01
RAPGEF3-220ENST00000549347 TCP10Q12799 353 aa21.39■■□□□ 1.01
RAPGEF3-220ENST00000549347 ERICH6BQ5W0A0 696 aa21.39■■□□□ 1.01
RAPGEF3-220ENST00000549347 MIGA1Q8NAN2 632 aa21.39■■□□□ 1.01
RAPGEF3-220ENST00000549347 HHIPL1Q96JK4 782 aa21.39■■□□□ 1.01
RAPGEF3-220ENST00000549347 RIOK1Q9BRS2 568 aaKnown RBP21.39■■□□□ 1.01
RAPGEF3-220ENST00000549347 SIPA1L1O43166 1804 aa21.39■■□□□ 1.01
RAPGEF3-220ENST00000549347 DYNLL1P63167 89 aaKnown RBP21.38■■□□□ 1.01
RAPGEF3-220ENST00000549347 MYH1P12882 1939 aa21.37■■□□□ 1.01
RAPGEF3-220ENST00000549347 CHGBP05060 677 aa21.37■■□□□ 1.01
RAPGEF3-220ENST00000549347 ZFYP08048 801 aaPredicted RBP21.37■■□□□ 1.01
RAPGEF3-220ENST00000549347 PICALMQ13492 652 aa21.37■■□□□ 1.01
RAPGEF3-220ENST00000549347 MAP3K11Q16584 847 aa21.37■■□□□ 1.01
RAPGEF3-220ENST00000549347 ZFPM1Q8IX07 1006 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms