RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 GNL3LQ9NVN8 582 aaKnown RBP9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 WWC3Q9ULE0 1092 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 DENND2AQ9ULE3 1009 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 MYH2Q9UKX2 1941 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 TCRBV5S4A2TA0A5A2 114 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 M0R2C6 588 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 C21orf2O43822 256 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 REC8O95072 547 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 RBM25P49756 843 aaKnown RBP9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 PTH1RQ03431 593 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 CCDC129Q6ZRS4 1044 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 ZNF804AQ7Z570 1209 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 TICAM2Q86XR7 235 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 RUFY2Q8WXA3 655 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 OSBP2Q969R2 916 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 RTFDC1Q9BY42 306 aaPredicted RBP9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 CD209Q9NNX6 404 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 COL4A5P29400 1685 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 MAST3O60307 1309 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 CDK5RAP2Q96SN8 1893 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 IDH1O75874 414 aaKnown RBP9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 IL1R1P14778 569 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 PDE6AP16499 860 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 CHAF1AQ13111 956 aaPredicted RBP9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 MFSD10Q14728 455 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 ZNF384Q8TF68 577 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 APPBP2Q92624 585 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 KIF2CQ99661 725 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 UPF2Q9HAU5 1272 aaKnown RBP9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 ANO2Q9NQ90 1003 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 HELLSQ9NRZ9 838 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 PIM2Q9P1W9 311 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 JAG2Q9Y219 1238 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 SALL1Q9NSC2 1324 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 ADAMTSL1Q8N6G6 1762 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 LAMA4Q16363 1823 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 ZFYP08048 801 aaPredicted RBP9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 PRDX5P30044 214 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 UBE3CQ15386 1083 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 GRIK5Q16478 980 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 WASHC4Q2M389 1173 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 MCMDC2Q4G0Z9 681 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 CCDC93Q567U6 631 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 SLC9C2Q5TAH2 1124 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 CC2D2BQ6DHV5 1058 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 COA1Q9GZY4 146 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 PUS7LQ9H0K6 701 aaKnown RBP9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 ZNF532Q9HCE3 1301 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 FOXP2O15409 715 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 EPB41L2O43491 1005 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 EIF5BO60841 1220 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 FRAT2O75474 233 aaPredicted RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 YBX3P16989 372 aaKnown RBP eCLIP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 MAP3K12Q12852 859 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 AOC3Q16853 763 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 LRRFIP1Q32MZ4 808 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 MAGEB6Q8N7X4 407 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 EYA3Q99504 573 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 ZC3H12CQ9C0D7 883 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 TMX4Q9H1E5 349 aaPredicted RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 LRP2BPQ9P2M1 347 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 ABCF2Q9UG63 623 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 PALD1Q9ULE6 856 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 BAZ2AQ9UIF9 1905 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 FAM205AQ6ZU69 1335 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 KIAA2012Q0VF49 1180 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 DALRD3Q5D0E6 543 aaKnown RBP9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 VPS53Q5VIR6 699 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 ZSCAN25Q6NSZ9 544 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 ADGRA1Q86SQ6 560 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 WDR66Q8TBY9 1149 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 MAP4K1Q92918 833 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 NSUN4Q96CB9 384 aaKnown RBP9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 PSMD1Q99460 953 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 DBNDD1Q9H9R9 158 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 RBM8AQ9Y5S9 174 aaKnown RBP9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 SBF1O95248 1867 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 FOCADQ5VW36 1801 aa9.71□□□□□ -0.85
DEPDC4-207ENST00000549249 GPAA1O43292 621 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 ECE2O60344 883 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 CYP7A1P22680 504 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 HSPA4P34932 840 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 GTF2IP78347 998 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 MECOMQ03112 1051 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 GRIPAP1Q4V328 841 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 KIAA1211Q6ZU35 1233 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 ERICH6Q7L0X2 663 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 RTKN2Q8IZC4 609 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 SUPT20HQ8NEM7 779 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 KCNB2Q92953 911 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 IL17RAQ96F46 866 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 KCNQ5Q9NR82 932 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 RAI14Q9P0K7 980 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 DICER1Q9UPY3 1922 aaKnown RBP9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 LAMB1P07942 1786 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms