RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 SNCAIPQ9Y6H5 919 aa19.96■□□□□ 0.79
RAPGEF3-217ENST00000548434 PDS5AQ29RF7 1337 aaKnown RBP19.96■□□□□ 0.79
RAPGEF3-217ENST00000548434 PNMA6EA0A0J9YXQ4 647 aa19.95■□□□□ 0.78
RAPGEF3-217ENST00000548434 MLLT1Q03111 559 aaPredicted RBP19.95■□□□□ 0.78
RAPGEF3-217ENST00000548434 NFIAQ12857 509 aa19.95■□□□□ 0.78
RAPGEF3-217ENST00000548434 RFX7Q2KHR2 1363 aa19.95■□□□□ 0.78
RAPGEF3-217ENST00000548434 SPDYE5A6NIY4 337 aa19.94■□□□□ 0.78
RAPGEF3-217ENST00000548434 SRGAP3O43295 1099 aa19.94■□□□□ 0.78
RAPGEF3-217ENST00000548434 TFCP2Q12800 502 aa19.94■□□□□ 0.78
RAPGEF3-217ENST00000548434 CRHR2Q13324 411 aa19.94■□□□□ 0.78
RAPGEF3-217ENST00000548434 RASGRF1Q13972 1273 aa19.94■□□□□ 0.78
RAPGEF3-217ENST00000548434 FAM151AQ8WW52 585 aa19.94■□□□□ 0.78
RAPGEF3-217ENST00000548434 FAM163AQ96GL9 167 aaPredicted RBP19.94■□□□□ 0.78
RAPGEF3-217ENST00000548434 DENND2AQ9ULE3 1009 aa19.94■□□□□ 0.78
RAPGEF3-217ENST00000548434 GAKO14976 1311 aa19.94■□□□□ 0.78
RAPGEF3-217ENST00000548434 ATRNL1Q5VV63 1379 aa19.94■□□□□ 0.78
RAPGEF3-217ENST00000548434 IPO8O15397 1037 aaKnown RBP19.93■□□□□ 0.78
RAPGEF3-217ENST00000548434 FBXO46Q6PJ61 603 aaPredicted RBP19.93■□□□□ 0.78
RAPGEF3-217ENST00000548434 ZFPM1Q8IX07 1006 aa19.93■□□□□ 0.78
RAPGEF3-217ENST00000548434 XAGE2Q96GT9 111 aa19.93■□□□□ 0.78
RAPGEF3-217ENST00000548434 AK9Q5TCS8 1911 aa19.93■□□□□ 0.78
RAPGEF3-217ENST00000548434 A0A1B0GUL7 405 aa19.92■□□□□ 0.78
RAPGEF3-217ENST00000548434 TMEM57Q8N5G2 664 aa19.92■□□□□ 0.78
RAPGEF3-217ENST00000548434 ZKSCAN4Q969J2 545 aaPredicted RBP19.92■□□□□ 0.78
RAPGEF3-217ENST00000548434 GNL3LQ9NVN8 582 aaKnown RBP19.92■□□□□ 0.78
RAPGEF3-217ENST00000548434 LDHBP07195 334 aaKnown RBP19.91■□□□□ 0.78
RAPGEF3-217ENST00000548434 MAP3K10Q02779 954 aa19.91■□□□□ 0.78
RAPGEF3-217ENST00000548434 POLA2Q14181 598 aa19.91■□□□□ 0.78
RAPGEF3-217ENST00000548434 OTOP1Q7RTM1 612 aa19.91■□□□□ 0.78
RAPGEF3-217ENST00000548434 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.91■□□□□ 0.78
RAPGEF3-217ENST00000548434 KIAA0100Q14667 2235 aaKnown RBP19.9■□□□□ 0.78
RAPGEF3-217ENST00000548434 GNAI2P04899 355 aa19.9■□□□□ 0.78
RAPGEF3-217ENST00000548434 SOX10P56693 466 aa19.9■□□□□ 0.78
RAPGEF3-217ENST00000548434 SH3BP5LQ7L8J4 393 aa19.9■□□□□ 0.78
RAPGEF3-217ENST00000548434 FAM43AQ8N2R8 423 aa19.9■□□□□ 0.78
RAPGEF3-217ENST00000548434 CLUAP1Q96AJ1 413 aa19.9■□□□□ 0.78
RAPGEF3-217ENST00000548434 IDI2Q9BXS1 227 aa19.9■□□□□ 0.78
RAPGEF3-217ENST00000548434 IRF6O14896 467 aa19.89■□□□□ 0.77
RAPGEF3-217ENST00000548434 RLBP1P12271 317 aa19.89■□□□□ 0.77
RAPGEF3-217ENST00000548434 INPP5BP32019 993 aa19.89■□□□□ 0.77
RAPGEF3-217ENST00000548434 GTF2A2P52657 109 aa19.89■□□□□ 0.77
RAPGEF3-217ENST00000548434 MOGSQ13724 837 aa19.89■□□□□ 0.77
RAPGEF3-217ENST00000548434 MIGA2Q7L4E1 593 aa19.89■□□□□ 0.77
RAPGEF3-217ENST00000548434 ERO1BQ86YB8 467 aa19.89■□□□□ 0.77
RAPGEF3-217ENST00000548434 FRAT1Q92837 279 aaPredicted RBP19.89■□□□□ 0.77
RAPGEF3-217ENST00000548434 WRNIP1Q96S55 665 aa19.89■□□□□ 0.77
RAPGEF3-217ENST00000548434 MYO5AQ9Y4I1 1855 aaKnown RBP19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 PHIPQ8WWQ0 1821 aa19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 PHF20L1A8MW92 1017 aa19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 SSH3Q8TE77 659 aa19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 OTUD5Q96G74 571 aa19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 USP40Q9NVE5 1235 aa19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 TMOD2Q9NZR1 351 aa19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 HMG20BQ9P0W2 317 aa19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 AKAP2Q9Y2D5 859 aa19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 CSADQ9Y600 493 aa19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 DOCK2Q92608 1830 aa19.88■□□□□ 0.77
RAPGEF3-217ENST00000548434 CCL15-CCL14A0A0B4J2E2 113 aa19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 ZBTB7BO15156 539 aaPredicted RBP19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 WDHD1O75717 1129 aaPredicted RBP19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 ARID4AP29374 1257 aaPredicted RBP19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 RHBDL3P58872 404 aa19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 TCP10Q12799 353 aa19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 PPIL2Q13356 520 aa19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 CCL15Q16663 113 aa19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 NOL9Q5SY16 702 aaKnown RBP19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 ZKSCAN2Q63HK3 967 aa19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 OTUD7BQ6GQQ9 843 aa19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 ZNF341Q9BYN7 854 aa19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 DDX4Q9NQI0 724 aaKnown RBP19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 ZSWIM8A7E2V4 1837 aa19.87■□□□□ 0.77
RAPGEF3-217ENST00000548434 PTPRFP10586 1907 aa19.86■□□□□ 0.77
RAPGEF3-217ENST00000548434 BTBD19C9JJ37 291 aa19.86■□□□□ 0.77
RAPGEF3-217ENST00000548434 ATP8B2P98198 1209 aa19.86■□□□□ 0.77
RAPGEF3-217ENST00000548434 DCAF15Q66K64 600 aa19.86■□□□□ 0.77
RAPGEF3-217ENST00000548434 PI16Q6UXB8 463 aa19.86■□□□□ 0.77
RAPGEF3-217ENST00000548434 ZGPATQ8N5A5 531 aaKnown RBP19.86■□□□□ 0.77
RAPGEF3-217ENST00000548434 CD99L2Q8TCZ2 262 aa19.86■□□□□ 0.77
RAPGEF3-217ENST00000548434 HOOK2Q96ED9 719 aa19.86■□□□□ 0.77
RAPGEF3-217ENST00000548434 ZCCHC17Q9NP64 241 aaKnown RBP19.86■□□□□ 0.77
RAPGEF3-217ENST00000548434 KCNH4Q9UQ05 1017 aa19.86■□□□□ 0.77
RAPGEF3-217ENST00000548434 RBBP6Q7Z6E9 1792 aaKnown RBP19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 GPR75-ASB3A0A0A6YYF3 556 aa19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 ENTPD3O75355 529 aa19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 SLURP2P0DP57 97 aa19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 HNRNPUQ00839 825 aaKnown RBP eCLIP19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 SP3Q02447 781 aa19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 PPATQ06203 517 aa19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 MVPQ14764 893 aaKnown RBP19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 DIEXFQ68CQ4 756 aaKnown RBP19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 PTPN22Q9Y2R2 807 aa19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 NOP58Q9Y2X3 529 aaKnown RBP19.85■□□□□ 0.77
RAPGEF3-217ENST00000548434 RGS3P49796 1198 aa19.84■□□□□ 0.77
RAPGEF3-217ENST00000548434 MECOMQ03112 1051 aa19.84■□□□□ 0.77
RAPGEF3-217ENST00000548434 GPR108Q9NPR9 543 aa19.84■□□□□ 0.77
RAPGEF3-217ENST00000548434 TRIM17Q9Y577 477 aa19.84■□□□□ 0.77
RAPGEF3-217ENST00000548434 CDK5RAP2Q96SN8 1893 aa19.84■□□□□ 0.77
RAPGEF3-217ENST00000548434 ADGRA2Q96PE1 1338 aa19.83■□□□□ 0.77
RAPGEF3-217ENST00000548434 DDTLA6NHG4 134 aaPredicted RBP19.83■□□□□ 0.77
RAPGEF3-217ENST00000548434 NPM3O75607 178 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms