RNA–Protein interactions for RNA: ENST00000548346.1

NPIPB12-203, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 2

Gene NPIPB12, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-203ENST00000548346 MKRN1Q9UHC7 482 aaKnown RBP6.95□□□□□ -1.3
NPIPB12-203ENST00000548346 NOD1Q9Y239 953 aa6.95□□□□□ -1.3
NPIPB12-203ENST00000548346 PARP3Q9Y6F1 533 aa6.95□□□□□ -1.3
NPIPB12-203ENST00000548346 CNTNAP5Q8WYK1 1306 aa6.95□□□□□ -1.3
NPIPB12-203ENST00000548346 PCDH11XQ9BZA7 1347 aa6.95□□□□□ -1.3
NPIPB12-203ENST00000548346 PCDH11YQ9BZA8 1340 aa6.95□□□□□ -1.3
NPIPB12-203ENST00000548346 INSRP06213 1382 aa6.95□□□□□ -1.3
NPIPB12-203ENST00000548346 EDC4Q6P2E9 1401 aaKnown RBP6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 PDE4DIPQ5VU43 2346 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 LOC102724428A0A0B4J2F2 783 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 USP17L3A6NCW0 530 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 USP17L4A6NCW7 530 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 OIP5O43482 229 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 RAD21O60216 631 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 HSPA8P11142 646 aaKnown RBP6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 HOXB4P17483 251 aaPredicted RBP6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 GTF2E1P29083 439 aaPredicted RBP6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 HOXC9P31274 260 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 SIK1P57059 783 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 MAP3K10Q02779 954 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 USP17L2Q6R6M4 530 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 MPRIPQ6WCQ1 1025 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 USP17L1Q7RTZ2 530 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 PGBD3Q8N328 593 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 OXCT2Q9BYC2 517 aaPredicted RBP6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 ATXN7L1Q9ULK2 861 aaPredicted RBP6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 MAP3K19Q56UN5 1328 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 SBF1O95248 1867 aa6.94□□□□□ -1.3
NPIPB12-203ENST00000548346 CYP27B1O15528 508 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 DKK1O94907 266 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 GYS1P13807 737 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 LMNB1P20700 586 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 TXLNAP40222 546 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 MARSP56192 900 aaKnown RBP6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 ITPK1Q13572 414 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 TMEM132AQ24JP5 1023 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 TBCELQ5QJ74 424 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 SH3PXD2AQ5TCZ1 1133 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 PLEKHM2Q8IWE5 1019 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 TMC1Q8TDI8 760 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 C7orf43Q8WVR3 580 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 PIGBQ92521 554 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 LTV1Q96GA3 475 aaPredicted RBP6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 ZIC5Q96T25 663 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 ZCCHC2Q9C0B9 1178 aaKnown RBP6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 RTL1A6NKG5 1358 aa6.93□□□□□ -1.3
NPIPB12-203ENST00000548346 A0A1W2PNR3 127 aa6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 RNF225M0QZC1 329 aaPredicted RBP6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 LZTS3O60299 673 aaPredicted RBP6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 ITGB2P05107 769 aa6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 FGFR3P22607 806 aa6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 SNRPNP63162 240 aaKnown RBP6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 CNGB1Q14028 1251 aaPredicted RBP6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 EFHC2Q5JST6 749 aa6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 NBPF6Q5VWK0 638 aa6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 RAPGEF4Q8WZA2 1011 aa6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 NBPF4Q96M43 638 aa6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 PASKQ96RG2 1323 aa6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 KDRP35968 1356 aa6.92□□□□□ -1.3
NPIPB12-203ENST00000548346 ATP9BO43861 1147 aa6.91□□□□□ -1.3
NPIPB12-203ENST00000548346 MAP2K3P46734 347 aa6.91□□□□□ -1.3
NPIPB12-203ENST00000548346 TRAPPC3LQ5T215 181 aa6.91□□□□□ -1.3
NPIPB12-203ENST00000548346 TPCN2Q8NHX9 752 aa6.91□□□□□ -1.3
NPIPB12-203ENST00000548346 C1orf216Q8TAB5 229 aa6.91□□□□□ -1.3
NPIPB12-203ENST00000548346 ZDHHC3Q9NYG2 299 aa6.91□□□□□ -1.3
NPIPB12-203ENST00000548346 KLF15Q9UIH9 416 aa6.91□□□□□ -1.3
NPIPB12-203ENST00000548346 RTCBQ9Y3I0 505 aaKnown RBP6.91□□□□□ -1.3
NPIPB12-203ENST00000548346 VIRMAQ69YN4 1812 aaKnown RBP6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 CCDC85CA6NKD9 419 aa6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 TATP17735 454 aaPredicted RBP6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 TNP2Q05952 138 aa6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 NLRP8Q86W28 1048 aa6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 SLC9A9Q8IVB4 645 aa6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 GLMNQ92990 594 aa6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 SCARF2Q96GP6 870 aaPredicted RBP6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 NSFL1CQ9UNZ2 370 aaKnown RBP6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 PHF24Q9UPV7 400 aa6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 PCDHGC4Q9Y5F7 938 aa6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 CNTNAP4Q9C0A0 1308 aa6.9□□□□□ -1.3
NPIPB12-203ENST00000548346 ZNF831Q5JPB2 1677 aa6.9□□□□□ -1.31
NPIPB12-203ENST00000548346 RGPD2P0DJD1 1756 aa6.9□□□□□ -1.31
NPIPB12-203ENST00000548346 ITGB4P16144 1822 aa6.9□□□□□ -1.31
NPIPB12-203ENST00000548346 DCDC2BA2VCK2 349 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 RASSF10A6NK89 507 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 NFKBIEO00221 500 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 ATXN7O15265 892 aaPredicted RBP6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 MAPTP10636 758 aaKnown RBP6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 CHRNA5P30532 468 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 AMPHP49418 695 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 MAP2K1Q02750 393 aaPredicted RBP6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 DDR1Q08345 913 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 GRIN2CQ14957 1233 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 KANK3Q6NY19 840 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 HDGFL2Q7Z4V5 671 aaPredicted RBP6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 WWC1Q8IX03 1113 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 USHBP1Q8N6Y0 703 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 GALNT6Q8NCL4 622 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 NEDD1Q8NHV4 660 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 PANK3Q9H999 370 aa6.89□□□□□ -1.31
NPIPB12-203ENST00000548346 ENAMQ9NRM1 1142 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms