RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 VGLL4Q14135 290 aa8.53□□□□□ -1.04
RNF41-204ENST00000548120 NFE2L2Q16236 605 aa8.53□□□□□ -1.04
RNF41-204ENST00000548120 FBXO3Q9UK99 471 aa8.53□□□□□ -1.04
RNF41-204ENST00000548120 PCDHB8Q9UN66 801 aa8.53□□□□□ -1.04
RNF41-204ENST00000548120 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
RNF41-204ENST00000548120 BTBD19C9JJ37 291 aa8.52□□□□□ -1.05
RNF41-204ENST00000548120 MYO1BO43795 1136 aa8.52□□□□□ -1.05
RNF41-204ENST00000548120 RARSP54136 660 aaKnown RBP8.52□□□□□ -1.05
RNF41-204ENST00000548120 ZNF697Q5TEC3 545 aa8.52□□□□□ -1.05
RNF41-204ENST00000548120 NECAB2Q7Z6G3 386 aa8.52□□□□□ -1.05
RNF41-204ENST00000548120 PSME4Q14997 1843 aa8.52□□□□□ -1.05
RNF41-204ENST00000548120 AOX1Q06278 1338 aa8.52□□□□□ -1.05
RNF41-204ENST00000548120 TTC28Q96AY4 2481 aa8.52□□□□□ -1.05
RNF41-204ENST00000548120 F8W031 263 aaPredicted RBP8.51□□□□□ -1.05
RNF41-204ENST00000548120 INHAP05111 366 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 CT47B1P0C2W7 299 aaPredicted RBP8.51□□□□□ -1.05
RNF41-204ENST00000548120 CETPP11597 493 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 ELNP15502 786 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 GTF2IP78347 998 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 MMRN1Q13201 1228 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 RASA3Q14644 834 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 TTLL5Q6EMB2 1281 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.51□□□□□ -1.05
RNF41-204ENST00000548120 ANKRD18AQ8IVF6 992 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 TSR2Q969E8 191 aaKnown RBP8.51□□□□□ -1.05
RNF41-204ENST00000548120 CDX2Q99626 313 aaPredicted RBP8.51□□□□□ -1.05
RNF41-204ENST00000548120 COA1Q9GZY4 146 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 TSPYL4Q9UJ04 414 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 CSADQ9Y600 493 aa8.51□□□□□ -1.05
RNF41-204ENST00000548120 ADCY3O60266 1144 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 MMP14P50281 582 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 EXOSC9Q06265 439 aaKnown RBP8.5□□□□□ -1.05
RNF41-204ENST00000548120 MAP3K12Q12852 859 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 CFAP100Q494V2 611 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 CCDC152Q4G0S7 254 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 FAM109BQ6ICB4 259 aaPredicted RBP8.5□□□□□ -1.05
RNF41-204ENST00000548120 C17orf99Q6UX52 265 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 TXNRD3Q86VQ6 643 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 SPNS2Q8IVW8 549 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 HELBQ8NG08 1087 aaPredicted RBP8.5□□□□□ -1.05
RNF41-204ENST00000548120 ISCA1Q9BUE6 129 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 TAOK2Q9UL54 1235 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 GABRQQ9UN88 632 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 FAM205AQ6ZU69 1335 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 ADGRA2Q96PE1 1338 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 OTOFQ9HC10 1997 aa8.5□□□□□ -1.05
RNF41-204ENST00000548120 SPDYE5A6NIY4 337 aa8.49□□□□□ -1.05
RNF41-204ENST00000548120 NEFMP07197 916 aa8.49□□□□□ -1.05
RNF41-204ENST00000548120 KLRK1P26718 216 aa8.49□□□□□ -1.05
RNF41-204ENST00000548120 RBM5P52756 815 aaKnown RBP eCLIP8.49□□□□□ -1.05
RNF41-204ENST00000548120 FCGRTP55899 365 aa8.49□□□□□ -1.05
RNF41-204ENST00000548120 MDM2Q00987 491 aaPredicted RBP8.49□□□□□ -1.05
RNF41-204ENST00000548120 SNAPC2Q13487 334 aa8.49□□□□□ -1.05
RNF41-204ENST00000548120 TJAP1Q5JTD0 557 aa8.49□□□□□ -1.05
RNF41-204ENST00000548120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.49□□□□□ -1.05
RNF41-204ENST00000548120 MYLIPQ8WY64 445 aa8.49□□□□□ -1.05
RNF41-204ENST00000548120 MARVELD3Q96A59 401 aa8.49□□□□□ -1.05
RNF41-204ENST00000548120 ZCCHC17Q9NP64 241 aaKnown RBP8.49□□□□□ -1.05
RNF41-204ENST00000548120 IRF6O14896 467 aa8.48□□□□□ -1.05
RNF41-204ENST00000548120 FOSL2P15408 326 aa8.48□□□□□ -1.05
RNF41-204ENST00000548120 CCT4P50991 539 aaKnown RBP8.48□□□□□ -1.05
RNF41-204ENST00000548120 MAP3K9P80192 1104 aa8.48□□□□□ -1.05
RNF41-204ENST00000548120 ZNF467Q7Z7K2 595 aaPredicted RBP8.48□□□□□ -1.05
RNF41-204ENST00000548120 CERS5Q8N5B7 392 aa8.48□□□□□ -1.05
RNF41-204ENST00000548120 MTMR14Q8NCE2 650 aa8.48□□□□□ -1.05
RNF41-204ENST00000548120 PLBD2Q8NHP8 589 aa8.48□□□□□ -1.05
RNF41-204ENST00000548120 PANK1Q8TE04 598 aa8.48□□□□□ -1.05
RNF41-204ENST00000548120 PRMT6Q96LA8 375 aaPredicted RBP8.48□□□□□ -1.05
RNF41-204ENST00000548120 CRISPLD2Q9H0B8 497 aa8.48□□□□□ -1.05
RNF41-204ENST00000548120 PAK6Q9NQU5 681 aaPredicted RBP8.48□□□□□ -1.05
RNF41-204ENST00000548120 CHPF2Q9P2E5 772 aa8.48□□□□□ -1.05
RNF41-204ENST00000548120 TNNQ9UQP3 1299 aa8.48□□□□□ -1.05
RNF41-204ENST00000548120 COL2A1P02458 1487 aaPredicted RBP8.47□□□□□ -1.05
RNF41-204ENST00000548120 PDHXO00330 501 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 ZNF853P0CG23 659 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 RLBP1P12271 317 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 FLT3LGP49771 235 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 LMOD3Q0VAK6 560 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 TNFAIP1Q13829 316 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 GSE1Q14687 1217 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 ZBTB38Q8NAP3 1195 aaPredicted RBP8.47□□□□□ -1.05
RNF41-204ENST00000548120 JARID2Q92833 1246 aaPredicted RBP8.47□□□□□ -1.05
RNF41-204ENST00000548120 NBPF3Q9H094 633 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.47□□□□□ -1.05
RNF41-204ENST00000548120 C11orf49Q9H6J7 331 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 IFT57Q9NWB7 429 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 MINPP1Q9UNW1 487 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 JAG2Q9Y219 1238 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 SNCAIPQ9Y6H5 919 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 PRUNE2Q8WUY3 3088 aa8.47□□□□□ -1.05
RNF41-204ENST00000548120 TCP10L2B9ZVM9 353 aa8.46□□□□□ -1.06
RNF41-204ENST00000548120 HSP90B1P14625 803 aaKnown RBP8.46□□□□□ -1.06
RNF41-204ENST00000548120 CALD1Q05682 793 aaKnown RBP8.46□□□□□ -1.06
RNF41-204ENST00000548120 CENPQQ7L2Z9 268 aaPredicted RBP8.46□□□□□ -1.06
RNF41-204ENST00000548120 ERO1BQ86YB8 467 aa8.46□□□□□ -1.06
RNF41-204ENST00000548120 SSH1Q8WYL5 1049 aa8.46□□□□□ -1.06
RNF41-204ENST00000548120 FRAT1Q92837 279 aaPredicted RBP8.46□□□□□ -1.06
RNF41-204ENST00000548120 ZKSCAN4Q969J2 545 aaPredicted RBP8.46□□□□□ -1.06
RNF41-204ENST00000548120 TEPSINQ96N21 525 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms