RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 CWC22Q9HCG8 908 aaKnown RBP14.67□□□□□ -0.06
RAB5B-204ENST00000548068 ATP8A2Q9NTI2 1148 aa14.67□□□□□ -0.06
RAB5B-204ENST00000548068 CIZ1Q9ULV3 898 aaPredicted RBP14.67□□□□□ -0.06
RAB5B-204ENST00000548068 NAV1Q8NEY1 1877 aa14.67□□□□□ -0.06
RAB5B-204ENST00000548068 WDR19Q8NEZ3 1342 aa14.66□□□□□ -0.06
RAB5B-204ENST00000548068 ECE2O60344 883 aa14.66□□□□□ -0.06
RAB5B-204ENST00000548068 DOK7Q18PE1 504 aa14.66□□□□□ -0.06
RAB5B-204ENST00000548068 DHX32Q7L7V1 743 aaKnown RBP14.66□□□□□ -0.06
RAB5B-204ENST00000548068 INTS4Q96HW7 963 aaKnown RBP14.66□□□□□ -0.06
RAB5B-204ENST00000548068 RNF41Q9H4P4 317 aaPredicted RBP14.66□□□□□ -0.06
RAB5B-204ENST00000548068 CNNM2Q9H8M5 875 aa14.66□□□□□ -0.06
RAB5B-204ENST00000548068 EPB41L4AQ9HCS5 686 aaPredicted RBP14.66□□□□□ -0.06
RAB5B-204ENST00000548068 CHMP5Q9NZZ3 219 aa14.66□□□□□ -0.06
RAB5B-204ENST00000548068 TAF6LQ9Y6J9 622 aa14.66□□□□□ -0.06
RAB5B-204ENST00000548068 ZNF646O15015 1829 aaPredicted RBP14.66□□□□□ -0.06
RAB5B-204ENST00000548068 PSDA5PKW4 1024 aaPredicted RBP14.65□□□□□ -0.06
RAB5B-204ENST00000548068 PPIP5K2O43314 1243 aa14.65□□□□□ -0.06
RAB5B-204ENST00000548068 CPA1P15085 419 aa14.65□□□□□ -0.06
RAB5B-204ENST00000548068 PPP4CP60510 307 aa14.65□□□□□ -0.06
RAB5B-204ENST00000548068 HAND2P61296 217 aa14.65□□□□□ -0.06
RAB5B-204ENST00000548068 DYNLL1P63167 89 aaKnown RBP14.65□□□□□ -0.06
RAB5B-204ENST00000548068 FGD1P98174 961 aa14.65□□□□□ -0.06
RAB5B-204ENST00000548068 CUL4AQ13619 759 aa14.65□□□□□ -0.06
RAB5B-204ENST00000548068 STRIP1Q5VSL9 837 aa14.65□□□□□ -0.06
RAB5B-204ENST00000548068 STOX1Q6ZVD7 989 aa14.65□□□□□ -0.06
RAB5B-204ENST00000548068 SPRYD3Q8NCJ5 442 aa14.65□□□□□ -0.06
RAB5B-204ENST00000548068 FAM163AQ96GL9 167 aaPredicted RBP14.65□□□□□ -0.06
RAB5B-204ENST00000548068 AATFQ9NY61 560 aaKnown RBP eCLIP14.65□□□□□ -0.06
RAB5B-204ENST00000548068 FER1L6Q2WGJ9 1857 aa14.65□□□□□ -0.06
RAB5B-204ENST00000548068 BAZ2AQ9UIF9 1905 aaKnown RBP14.64□□□□□ -0.07
RAB5B-204ENST00000548068 FOCADQ5VW36 1801 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 ARFGEF1Q9Y6D6 1849 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 CDK5RAP2Q96SN8 1893 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 PRKAB2O43741 272 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 PCP11498 1178 aaKnown RBP14.64□□□□□ -0.07
RAB5B-204ENST00000548068 MCM5P33992 734 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 AOC3Q16853 763 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 NOL8Q76FK4 1167 aaKnown RBP14.64□□□□□ -0.07
RAB5B-204ENST00000548068 AMOTL1Q8IY63 956 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 CHMP4CQ96CF2 233 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 KRT23Q9C075 422 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 DBNDD1Q9H9R9 158 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 ARPP21Q9UBL0 812 aaPredicted RBP14.64□□□□□ -0.07
RAB5B-204ENST00000548068 ANAPC4Q9UJX5 808 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 GAKO14976 1311 aa14.64□□□□□ -0.07
RAB5B-204ENST00000548068 GPR75-ASB3A0A0A6YYF3 556 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 USP17L3A6NCW0 530 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 USP17L4A6NCW7 530 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 SLC3A2P08195 630 aaKnown RBP14.63□□□□□ -0.07
RAB5B-204ENST00000548068 PTGER2P43116 358 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 NT5C2P49902 561 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 DIXDC1Q155Q3 683 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 AKNAD1Q5T1N1 836 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 USP17L1Q7RTZ2 530 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 FBXL16Q8N461 479 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 SDR42E1Q8WUS8 393 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 STAG1Q8WVM7 1258 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 SPON1Q9HCB6 807 aa14.63□□□□□ -0.07
RAB5B-204ENST00000548068 PPP1R1BQ9UD71 204 aaPredicted RBP14.63□□□□□ -0.07
RAB5B-204ENST00000548068 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.63□□□□□ -0.07
RAB5B-204ENST00000548068 SCN9AQ15858 1988 aa14.62□□□□□ -0.07
RAB5B-204ENST00000548068 BTDP43251 543 aa14.62□□□□□ -0.07
RAB5B-204ENST00000548068 USP5P45974 858 aa14.62□□□□□ -0.07
RAB5B-204ENST00000548068 EXOSC10Q01780 885 aaKnown RBP14.62□□□□□ -0.07
RAB5B-204ENST00000548068 PPARAQ07869 468 aa14.62□□□□□ -0.07
RAB5B-204ENST00000548068 MFSD6Q6ZSS7 791 aa14.62□□□□□ -0.07
RAB5B-204ENST00000548068 Q6ZUG5 572 aa14.62□□□□□ -0.07
RAB5B-204ENST00000548068 TBC1D10CQ8IV04 446 aa14.62□□□□□ -0.07
RAB5B-204ENST00000548068 MB21D2Q8IYB1 491 aaPredicted RBP14.62□□□□□ -0.07
RAB5B-204ENST00000548068 KLHL34Q8N239 644 aa14.62□□□□□ -0.07
RAB5B-204ENST00000548068 MYO3BQ8WXR4 1341 aa14.62□□□□□ -0.07
RAB5B-204ENST00000548068 ECM29Q5VYK3 1845 aa14.62□□□□□ -0.07
RAB5B-204ENST00000548068 DDX60LQ5H9U9 1706 aaKnown RBP14.61□□□□□ -0.07
RAB5B-204ENST00000548068 PRC1O43663 620 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 DDIT3P35638 169 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 HDLBPQ00341 1268 aaKnown RBP14.61□□□□□ -0.07
RAB5B-204ENST00000548068 TOB2Q14106 344 aaPredicted RBP14.61□□□□□ -0.07
RAB5B-204ENST00000548068 GRIK5Q16478 980 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 SBK1Q52WX2 424 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 HHIPL2Q6UWX4 724 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 LARGE2Q8N3Y3 721 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 TEKT1Q969V4 418 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 MTA3Q9BTC8 594 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 MRIQ9BWK5 157 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 AGXT2Q9BYV1 514 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 NBPF3Q9H094 633 aa14.61□□□□□ -0.07
RAB5B-204ENST00000548068 DCP1AQ9NPI6 582 aaPredicted RBP14.61□□□□□ -0.07
RAB5B-204ENST00000548068 TTF2Q9UNY4 1162 aaKnown RBP14.61□□□□□ -0.07
RAB5B-204ENST00000548068 DACT2Q5SW24 774 aa14.6□□□□□ -0.07
RAB5B-204ENST00000548068 NIM1KQ8IY84 436 aa14.6□□□□□ -0.07
RAB5B-204ENST00000548068 TEX11Q8IYF3 940 aa14.6□□□□□ -0.07
RAB5B-204ENST00000548068 CERS5Q8N5B7 392 aa14.6□□□□□ -0.07
RAB5B-204ENST00000548068 SH3RF3Q8TEJ3 882 aaPredicted RBP14.6□□□□□ -0.07
RAB5B-204ENST00000548068 TMEM87BQ96K49 555 aa14.6□□□□□ -0.07
RAB5B-204ENST00000548068 TAOK3Q9H2K8 898 aa14.6□□□□□ -0.07
RAB5B-204ENST00000548068 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
RAB5B-204ENST00000548068 DAGLAQ9Y4D2 1042 aa14.6□□□□□ -0.07
RAB5B-204ENST00000548068 MYH1P12882 1939 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 MINDY4BA8MYZ0 360 aa14.59□□□□□ -0.07
RAB5B-204ENST00000548068 IARSP41252 1262 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms