RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 RASGRF1Q13972 1273 aa19.66■□□□□ 0.74
CHMP1A-204ENST00000547687 CCDC129Q6ZRS4 1044 aa19.66■□□□□ 0.74
CHMP1A-204ENST00000547687 MICALL2Q8IY33 904 aa19.66■□□□□ 0.74
CHMP1A-204ENST00000547687 TRPM4Q8TD43 1214 aa19.66■□□□□ 0.74
CHMP1A-204ENST00000547687 LARP6Q9BRS8 491 aaKnown RBP19.66■□□□□ 0.74
CHMP1A-204ENST00000547687 ZNF646O15015 1829 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-204ENST00000547687 MYH7P12883 1935 aa19.66■□□□□ 0.74
CHMP1A-204ENST00000547687 EGFRP00533 1210 aa19.66■□□□□ 0.74
CHMP1A-204ENST00000547687 L1TD1Q5T7N2 865 aaKnown RBP19.66■□□□□ 0.74
CHMP1A-204ENST00000547687 GYG1P46976 350 aa19.65■□□□□ 0.74
CHMP1A-204ENST00000547687 ZMYM1Q5SVZ6 1142 aa19.65■□□□□ 0.74
CHMP1A-204ENST00000547687 SAMD7Q7Z3H4 446 aa19.65■□□□□ 0.74
CHMP1A-204ENST00000547687 DNAJC5GQ8N7S2 189 aa19.65■□□□□ 0.74
CHMP1A-204ENST00000547687 SPATA5Q8NB90 893 aa19.65■□□□□ 0.74
CHMP1A-204ENST00000547687 FBXW7Q969H0 707 aa19.65■□□□□ 0.74
CHMP1A-204ENST00000547687 MXD3Q9BW11 206 aa19.65■□□□□ 0.74
CHMP1A-204ENST00000547687 ANKRD2Q9GZV1 360 aa19.65■□□□□ 0.74
CHMP1A-204ENST00000547687 HELLSQ9NRZ9 838 aa19.65■□□□□ 0.74
CHMP1A-204ENST00000547687 ADARB2Q9NS39 739 aaKnown RBP19.65■□□□□ 0.74
CHMP1A-204ENST00000547687 GOLGA6L3A6NEY3 463 aa19.64■□□□□ 0.74
CHMP1A-204ENST00000547687 ITGBL1O95965 494 aaPredicted RBP19.64■□□□□ 0.74
CHMP1A-204ENST00000547687 HIRAP54198 1017 aaPredicted RBP19.64■□□□□ 0.74
CHMP1A-204ENST00000547687 TTF1Q15361 905 aaPredicted RBP19.64■□□□□ 0.74
CHMP1A-204ENST00000547687 FOXD4L5Q5VV16 416 aaPredicted RBP19.64■□□□□ 0.74
CHMP1A-204ENST00000547687 FOXD4L4Q8WXT5 416 aaPredicted RBP19.64■□□□□ 0.74
CHMP1A-204ENST00000547687 ZSCAN31Q96LW9 406 aaPredicted RBP19.64■□□□□ 0.74
CHMP1A-204ENST00000547687 PIH1D3Q9NQM4 214 aaKnown RBP19.64■□□□□ 0.74
CHMP1A-204ENST00000547687 RPAP1Q9BWH6 1393 aaPredicted RBP19.64■□□□□ 0.73
CHMP1A-204ENST00000547687 LRRFIP1Q32MZ4 808 aaKnown RBP19.64■□□□□ 0.73
CHMP1A-204ENST00000547687 TSGA10IPQ3SY00 556 aa19.64■□□□□ 0.73
CHMP1A-204ENST00000547687 RBM26Q5T8P6 1007 aaKnown RBP19.64■□□□□ 0.73
CHMP1A-204ENST00000547687 LEMD3Q9Y2U8 911 aa19.64■□□□□ 0.73
CHMP1A-204ENST00000547687 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.64■□□□□ 0.73
CHMP1A-204ENST00000547687 TBC1D10BQ4KMP7 808 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-204ENST00000547687 USP50Q70EL3 339 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-204ENST00000547687 LMBRD1Q9NUN5 540 aa19.63■□□□□ 0.73
CHMP1A-204ENST00000547687 DDX49Q9Y6V7 483 aaKnown RBP19.63■□□□□ 0.73
CHMP1A-204ENST00000547687 PASKQ96RG2 1323 aa19.63■□□□□ 0.73
CHMP1A-204ENST00000547687 FSD2A1L4K1 749 aa19.63■□□□□ 0.73
CHMP1A-204ENST00000547687 ZFYP08048 801 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-204ENST00000547687 OSBP2Q969R2 916 aa19.63■□□□□ 0.73
CHMP1A-204ENST00000547687 IQSEC3Q9UPP2 1182 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-204ENST00000547687 U3KPZ7 1027 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-204ENST00000547687 TRAF5O00463 557 aa19.62■□□□□ 0.73
CHMP1A-204ENST00000547687 VIL1P09327 827 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-204ENST00000547687 KLHL40Q2TBA0 621 aa19.62■□□□□ 0.73
CHMP1A-204ENST00000547687 CAVIN4Q5BKX8 364 aa19.62■□□□□ 0.73
CHMP1A-204ENST00000547687 BLOC1S2Q6QNY1 142 aa19.62■□□□□ 0.73
CHMP1A-204ENST00000547687 FAM84BQ96KN1 310 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-204ENST00000547687 SH2B1Q9NRF2 756 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-204ENST00000547687 MAST3O60307 1309 aa19.62■□□□□ 0.73
CHMP1A-204ENST00000547687 H7C1D1 291 aa19.61■□□□□ 0.73
CHMP1A-204ENST00000547687 IDH1O75874 414 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-204ENST00000547687 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.61■□□□□ 0.73
CHMP1A-204ENST00000547687 M0R2C6 588 aa19.61■□□□□ 0.73
CHMP1A-204ENST00000547687 LARGE1O95461 756 aa19.61■□□□□ 0.73
CHMP1A-204ENST00000547687 KRT32Q14532 448 aa19.61■□□□□ 0.73
CHMP1A-204ENST00000547687 DLK2Q6UY11 383 aa19.61■□□□□ 0.73
CHMP1A-204ENST00000547687 TAF6LQ9Y6J9 622 aa19.61■□□□□ 0.73
CHMP1A-204ENST00000547687 WDR33Q9C0J8 1336 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-204ENST00000547687 TRPM7Q96QT4 1865 aa19.6■□□□□ 0.73
CHMP1A-204ENST00000547687 PRPF40AO75400 957 aaKnown RBP19.6■□□□□ 0.73
CHMP1A-204ENST00000547687 RPS6KB1P23443 525 aa19.6■□□□□ 0.73
CHMP1A-204ENST00000547687 SLC9C2Q5TAH2 1124 aa19.6■□□□□ 0.73
CHMP1A-204ENST00000547687 PODNQ7Z5L7 613 aa19.6■□□□□ 0.73
CHMP1A-204ENST00000547687 VPS37DQ86XT2 251 aa19.6■□□□□ 0.73
CHMP1A-204ENST00000547687 DPF2Q92785 391 aa19.6■□□□□ 0.73
CHMP1A-204ENST00000547687 ALDH8A1Q9H2A2 487 aaPredicted RBP19.6■□□□□ 0.73
CHMP1A-204ENST00000547687 SMC3Q9UQE7 1217 aa19.6■□□□□ 0.73
CHMP1A-204ENST00000547687 USP17L3A6NCW0 530 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 USP17L4A6NCW7 530 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 ADD2P35612 726 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 RSBN1LQ6PCB5 846 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 USP17L1Q7RTZ2 530 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 APPBP2Q92624 585 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 GNL3LQ9NVN8 582 aaKnown RBP19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 JAG2Q9Y219 1238 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 DOCK2Q92608 1830 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 ASTN2O75129 1339 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 ANKRD1Q15327 319 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 ZSCAN25Q6NSZ9 544 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 FBXO33Q7Z6M2 555 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 CCDC83Q8IWF9 413 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 GLIS2Q9BZE0 524 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 PUS7LQ9H0K6 701 aaKnown RBP19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 IRS2Q9Y4H2 1338 aa19.59■□□□□ 0.73
CHMP1A-204ENST00000547687 ME3Q16798 604 aa19.58■□□□□ 0.73
CHMP1A-204ENST00000547687 CHAMP1Q96JM3 812 aa19.58■□□□□ 0.73
CHMP1A-204ENST00000547687 COA1Q9GZY4 146 aa19.58■□□□□ 0.73
CHMP1A-204ENST00000547687 MKRN1Q9UHC7 482 aaKnown RBP19.58■□□□□ 0.73
CHMP1A-204ENST00000547687 TPCN1Q9ULQ1 816 aa19.58■□□□□ 0.73
CHMP1A-204ENST00000547687 RPS12P25398 132 aaKnown RBP19.58■□□□□ 0.72
CHMP1A-204ENST00000547687 COL9A3Q14050 684 aaPredicted RBP19.58■□□□□ 0.72
CHMP1A-204ENST00000547687 KLRG1Q96E93 195 aa19.58■□□□□ 0.72
CHMP1A-204ENST00000547687 HSPD1P10809 573 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-204ENST00000547687 PDE6AP16499 860 aa19.57■□□□□ 0.72
CHMP1A-204ENST00000547687 HIBADHP31937 336 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-204ENST00000547687 NEK1Q96PY6 1258 aa19.57■□□□□ 0.72
CHMP1A-204ENST00000547687 DSCC1Q9BVC3 393 aa19.57■□□□□ 0.72
CHMP1A-204ENST00000547687 CD209Q9NNX6 404 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms