RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 BCL2L12Q9HB09 334 aa14.84□□□□□ -0.03
SCAF11-209ENST00000547018 HPS5Q9UPZ3 1129 aa14.84□□□□□ -0.03
SCAF11-209ENST00000547018 ABCC12Q96J65 1359 aa14.84□□□□□ -0.03
SCAF11-209ENST00000547018 DHX16O60231 1041 aaKnown RBP14.84□□□□□ -0.03
SCAF11-209ENST00000547018 TYRO3Q06418 890 aa14.84□□□□□ -0.03
SCAF11-209ENST00000547018 FAM47AQ5JRC9 791 aa14.84□□□□□ -0.03
SCAF11-209ENST00000547018 ARID4AP29374 1257 aaPredicted RBP14.83□□□□□ -0.03
SCAF11-209ENST00000547018 IARSP41252 1262 aaKnown RBP14.83□□□□□ -0.03
SCAF11-209ENST00000547018 TRAPPC3LQ5T215 181 aa14.83□□□□□ -0.03
SCAF11-209ENST00000547018 ZSCAN30Q86W11 494 aa14.83□□□□□ -0.03
SCAF11-209ENST00000547018 TACC3Q9Y6A5 838 aa14.83□□□□□ -0.03
SCAF11-209ENST00000547018 SHANK3Q9BYB0 1731 aa14.83□□□□□ -0.04
SCAF11-209ENST00000547018 KIF28PB7ZC32 967 aa14.83□□□□□ -0.04
SCAF11-209ENST00000547018 KINO60870 393 aaKnown RBP14.83□□□□□ -0.04
SCAF11-209ENST00000547018 HSPA1LP34931 641 aa14.83□□□□□ -0.04
SCAF11-209ENST00000547018 ZRSR1Q15695 479 aaKnown RBP14.83□□□□□ -0.04
SCAF11-209ENST00000547018 CPLX2Q6PUV4 134 aaKnown RBP14.83□□□□□ -0.04
SCAF11-209ENST00000547018 APOA5Q6Q788 366 aa14.83□□□□□ -0.04
SCAF11-209ENST00000547018 SEPT12Q8IYM1 358 aa14.83□□□□□ -0.04
SCAF11-209ENST00000547018 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.83□□□□□ -0.04
SCAF11-209ENST00000547018 ZNF274Q96GC6 653 aaPredicted RBP14.83□□□□□ -0.04
SCAF11-209ENST00000547018 FAM84BQ96KN1 310 aaPredicted RBP14.83□□□□□ -0.04
SCAF11-209ENST00000547018 LAMB4A4D0S4 1761 aa14.83□□□□□ -0.04
SCAF11-209ENST00000547018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.83□□□□□ -0.04
SCAF11-209ENST00000547018 NMT2O60551 498 aa14.83□□□□□ -0.04
SCAF11-209ENST00000547018 NFIXQ14938 502 aa14.83□□□□□ -0.04
SCAF11-209ENST00000547018 MYO5AQ9Y4I1 1855 aaKnown RBP14.82□□□□□ -0.04
SCAF11-209ENST00000547018 ABCA3Q99758 1704 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 USP17L12C9JPN9 530 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 USP17L21D6R901 530 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 F8W031 263 aaPredicted RBP14.82□□□□□ -0.04
SCAF11-209ENST00000547018 GUCY1A2P33402 732 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 TRIM29Q14134 588 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 DIXDC1Q155Q3 683 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 SMARCC2Q8TAQ2 1214 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 TRIM5Q9C035 493 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 TJP1Q07157 1748 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 TCRBV5S4A2TA0A5A2 114 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 CYP2D6P10635 497 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 BARGINQ6ZT62 677 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 GOLPH3LQ9H4A5 285 aa14.82□□□□□ -0.04
SCAF11-209ENST00000547018 R3HCC1Q9Y3T6 440 aaKnown RBP14.82□□□□□ -0.04
SCAF11-209ENST00000547018 WTAPQ15007 396 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 HSP90AA4PQ58FG1 418 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 AKNAD1Q5T1N1 836 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 TMEM87AQ8NBN3 555 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 ABCC6O95255 1503 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 AFF2P51816 1311 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 NUP98P52948 1817 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 HIBADHP31937 336 aaKnown RBP14.81□□□□□ -0.04
SCAF11-209ENST00000547018 ZNF396Q96N95 335 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-209ENST00000547018 PPP1R9BQ96SB3 815 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 ZSCAN16Q9H4T2 348 aaPredicted RBP14.81□□□□□ -0.04
SCAF11-209ENST00000547018 NHSL1Q5SYE7 1610 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 RIMBP2O15034 1052 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 DZIP1Q86YF9 867 aaKnown RBP14.81□□□□□ -0.04
SCAF11-209ENST00000547018 PDILTQ8N807 584 aa14.81□□□□□ -0.04
SCAF11-209ENST00000547018 AP5Z1O43299 807 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 ZNF165P49910 485 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 VPS72Q15906 364 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 SAP30BPQ9UHR5 308 aaKnown RBP14.8□□□□□ -0.04
SCAF11-209ENST00000547018 JCADQ9P266 1359 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 DOT1LQ8TEK3 1739 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 SART3Q15020 963 aaKnown RBP14.8□□□□□ -0.04
SCAF11-209ENST00000547018 KRT40Q6A162 431 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 ILDR1Q86SU0 546 aaPredicted RBP14.8□□□□□ -0.04
SCAF11-209ENST00000547018 CNBD1Q8NA66 436 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 FBXO18Q8NFZ0 1043 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 CLIC6Q96NY7 704 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 LRRC4BQ9NT99 713 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 PCDHA7Q9UN72 937 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 SLIT2O94813 1529 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 UBR2Q8IWV8 1755 aa14.8□□□□□ -0.04
SCAF11-209ENST00000547018 BECN2A8MW95 431 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 SH2B2O14492 632 aaPredicted RBP14.79□□□□□ -0.04
SCAF11-209ENST00000547018 RPS6KA4O75676 772 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 PPARAQ07869 468 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 LLPHQ9BRT6 129 aaKnown RBP14.79□□□□□ -0.04
SCAF11-209ENST00000547018 NARFQ9UHQ1 456 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 NUP188Q5SRE5 1749 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 RFX7Q2KHR2 1363 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 C6orf229H3BNL8 230 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 OLFM4Q6UX06 510 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 QTRT2Q9H974 415 aaKnown RBP14.79□□□□□ -0.04
SCAF11-209ENST00000547018 BTBD18B2RXH4 712 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 CLCN1P35523 988 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 MSL1Q68DK7 614 aa14.79□□□□□ -0.04
SCAF11-209ENST00000547018 GJD4Q96KN9 370 aaPredicted RBP14.79□□□□□ -0.04
SCAF11-209ENST00000547018 ALDH8A1Q9H2A2 487 aaPredicted RBP14.79□□□□□ -0.04
SCAF11-209ENST00000547018 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCAF11-209ENST00000547018 COL14A1Q05707 1796 aaKnown RBP14.79□□□□□ -0.04
SCAF11-209ENST00000547018 AKAP17AQ02040 695 aaKnown RBP14.78□□□□□ -0.04
SCAF11-209ENST00000547018 MECOMQ03112 1051 aa14.78□□□□□ -0.04
SCAF11-209ENST00000547018 PTPN21Q16825 1174 aa14.78□□□□□ -0.04
SCAF11-209ENST00000547018 BSDC1Q9NW68 430 aaPredicted RBP14.78□□□□□ -0.04
SCAF11-209ENST00000547018 MCM9Q9NXL9 1143 aa14.78□□□□□ -0.04
SCAF11-209ENST00000547018 MRVI1Q9Y6F6 885 aa14.78□□□□□ -0.04
SCAF11-209ENST00000547018 PHLPP1O60346 1717 aa14.78□□□□□ -0.04
SCAF11-209ENST00000547018 NR5A1Q13285 461 aa14.78□□□□□ -0.04
SCAF11-209ENST00000547018 RTN1Q16799 776 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms