RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 GAKO14976 1311 aa20.44■□□□□ 0.86
LTBR-215ENST00000546296 NF2P35240 595 aa20.43■□□□□ 0.86
LTBR-215ENST00000546296 BTDP43251 543 aa20.43■□□□□ 0.86
LTBR-215ENST00000546296 HTRA3P83110 453 aa20.43■□□□□ 0.86
LTBR-215ENST00000546296 RASA3Q14644 834 aa20.43■□□□□ 0.86
LTBR-215ENST00000546296 ZNF384Q8TF68 577 aa20.43■□□□□ 0.86
LTBR-215ENST00000546296 EDC3Q96F86 508 aaKnown RBP20.43■□□□□ 0.86
LTBR-215ENST00000546296 ABT1Q9ULW3 272 aaKnown RBP20.43■□□□□ 0.86
LTBR-215ENST00000546296 PPP2R3BQ9Y5P8 575 aa20.43■□□□□ 0.86
LTBR-215ENST00000546296 TTC41PQ6P2S7 1318 aa20.43■□□□□ 0.86
LTBR-215ENST00000546296 GPR75-ASB3A0A0A6YYF3 556 aa20.42■□□□□ 0.86
LTBR-215ENST00000546296 CYP7A1P22680 504 aa20.42■□□□□ 0.86
LTBR-215ENST00000546296 MAGEB6Q8N7X4 407 aa20.42■□□□□ 0.86
LTBR-215ENST00000546296 GLRX3O76003 335 aaKnown RBP20.41■□□□□ 0.86
LTBR-215ENST00000546296 BAG3O95817 575 aa20.41■□□□□ 0.86
LTBR-215ENST00000546296 C2orf69Q8N8R5 385 aa20.41■□□□□ 0.86
LTBR-215ENST00000546296 AKAP11Q9UKA4 1901 aa20.41■□□□□ 0.86
LTBR-215ENST00000546296 SUPT20HL1Q3ZLR7 823 aa20.4■□□□□ 0.86
LTBR-215ENST00000546296 SLC9C2Q5TAH2 1124 aa20.4■□□□□ 0.86
LTBR-215ENST00000546296 FKBP1CQ5VVH2 108 aa20.4■□□□□ 0.86
LTBR-215ENST00000546296 TMED8Q6PL24 325 aaPredicted RBP20.4■□□□□ 0.86
LTBR-215ENST00000546296 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.4■□□□□ 0.86
LTBR-215ENST00000546296 GBA2Q9HCG7 927 aaPredicted RBP20.4■□□□□ 0.86
LTBR-215ENST00000546296 MAP4K4O95819 1239 aaPredicted RBP20.39■□□□□ 0.85
LTBR-215ENST00000546296 TTLL12Q14166 644 aaPredicted RBP20.39■□□□□ 0.85
LTBR-215ENST00000546296 TMEM39BQ9GZU3 492 aa20.39■□□□□ 0.85
LTBR-215ENST00000546296 AATFQ9NY61 560 aaKnown RBP eCLIP20.39■□□□□ 0.85
LTBR-215ENST00000546296 POLR2AP24928 1970 aaKnown RBP20.38■□□□□ 0.85
LTBR-215ENST00000546296 PDE6AP16499 860 aa20.38■□□□□ 0.85
LTBR-215ENST00000546296 PLCG2P16885 1265 aa20.38■□□□□ 0.85
LTBR-215ENST00000546296 PDE1AP54750 535 aa20.38■□□□□ 0.85
LTBR-215ENST00000546296 TCP10Q12799 353 aa20.38■□□□□ 0.85
LTBR-215ENST00000546296 FAM83AQ86UY5 434 aa20.38■□□□□ 0.85
LTBR-215ENST00000546296 PI4K2BQ8TCG2 481 aa20.38■□□□□ 0.85
LTBR-215ENST00000546296 STAP2Q9UGK3 403 aa20.38■□□□□ 0.85
LTBR-215ENST00000546296 SALL3Q9BXA9 1300 aa20.37■□□□□ 0.85
LTBR-215ENST00000546296 NFIAQ12857 509 aa20.37■□□□□ 0.85
LTBR-215ENST00000546296 PRKG1Q13976 671 aa20.37■□□□□ 0.85
LTBR-215ENST00000546296 NBPF12Q5TAG4 269 aaPredicted RBP20.37■□□□□ 0.85
LTBR-215ENST00000546296 ZSCAN25Q6NSZ9 544 aa20.37■□□□□ 0.85
LTBR-215ENST00000546296 ADGRA1Q86SQ6 560 aa20.37■□□□□ 0.85
LTBR-215ENST00000546296 TEX11Q8IYF3 940 aa20.37■□□□□ 0.85
LTBR-215ENST00000546296 FAM151AQ8WW52 585 aa20.37■□□□□ 0.85
LTBR-215ENST00000546296 ZNF532Q9HCE3 1301 aa20.36■□□□□ 0.85
LTBR-215ENST00000546296 RGS3P49796 1198 aa20.36■□□□□ 0.85
LTBR-215ENST00000546296 RHBDL3P58872 404 aa20.36■□□□□ 0.85
LTBR-215ENST00000546296 PPP4CP60510 307 aa20.36■□□□□ 0.85
LTBR-215ENST00000546296 PICALMQ13492 652 aa20.36■□□□□ 0.85
LTBR-215ENST00000546296 PAXIP1Q6ZW49 1069 aaPredicted RBP20.36■□□□□ 0.85
LTBR-215ENST00000546296 MIGA1Q8NAN2 632 aa20.36■□□□□ 0.85
LTBR-215ENST00000546296 SH3RF3Q8TEJ3 882 aaPredicted RBP20.36■□□□□ 0.85
LTBR-215ENST00000546296 TLL2Q9Y6L7 1015 aa20.36■□□□□ 0.85
LTBR-215ENST00000546296 CNTNAP1P78357 1384 aa20.35■□□□□ 0.85
LTBR-215ENST00000546296 MYH2Q9UKX2 1941 aa20.35■□□□□ 0.85
LTBR-215ENST00000546296 HUNKP57058 714 aa20.35■□□□□ 0.85
LTBR-215ENST00000546296 FKBP1BP68106 108 aa20.35■□□□□ 0.85
LTBR-215ENST00000546296 DEFB115Q30KQ5 88 aa20.35■□□□□ 0.85
LTBR-215ENST00000546296 SAPCD2Q86UD0 394 aa20.35■□□□□ 0.85
LTBR-215ENST00000546296 CCDC136Q96JN2 1154 aa20.35■□□□□ 0.85
LTBR-215ENST00000546296 IDI2Q9BXS1 227 aa20.35■□□□□ 0.85
LTBR-215ENST00000546296 FAM198AQ9UFP1 575 aa20.35■□□□□ 0.85
LTBR-215ENST00000546296 MKRN1Q9UHC7 482 aaKnown RBP20.35■□□□□ 0.85
LTBR-215ENST00000546296 MAGEB6P1A0A0J9YX57 407 aa20.34■□□□□ 0.85
LTBR-215ENST00000546296 PPP1R12BO60237 982 aaPredicted RBP20.34■□□□□ 0.85
LTBR-215ENST00000546296 ENTPD3O75355 529 aa20.34■□□□□ 0.85
LTBR-215ENST00000546296 WDHD1O75717 1129 aaPredicted RBP20.34■□□□□ 0.85
LTBR-215ENST00000546296 DYNLL1P63167 89 aaKnown RBP20.34■□□□□ 0.85
LTBR-215ENST00000546296 LRRFIP1Q32MZ4 808 aaKnown RBP20.34■□□□□ 0.85
LTBR-215ENST00000546296 ARMC9Q7Z3E5 817 aa20.34■□□□□ 0.85
LTBR-215ENST00000546296 CERS3Q8IU89 383 aa20.34■□□□□ 0.85
LTBR-215ENST00000546296 PLEKHM2Q8IWE5 1019 aa20.34■□□□□ 0.85
LTBR-215ENST00000546296 ZSCAN29Q8IWY8 852 aaPredicted RBP20.34■□□□□ 0.85
LTBR-215ENST00000546296 KBTBD3Q8NAB2 608 aa20.34■□□□□ 0.85
LTBR-215ENST00000546296 HOOK2Q96ED9 719 aa20.34■□□□□ 0.85
LTBR-215ENST00000546296 TEPSINQ96N21 525 aa20.34■□□□□ 0.85
LTBR-215ENST00000546296 ECM29Q5VYK3 1845 aa20.33■□□□□ 0.85
LTBR-215ENST00000546296 UBE2Q2LH0YL09 131 aa20.33■□□□□ 0.85
LTBR-215ENST00000546296 ADD2P35612 726 aa20.33■□□□□ 0.85
LTBR-215ENST00000546296 MOB2Q70IA6 237 aa20.33■□□□□ 0.85
LTBR-215ENST00000546296 ZFPM1Q8IX07 1006 aa20.33■□□□□ 0.85
LTBR-215ENST00000546296 ANGEL1Q9UNK9 670 aaKnown RBP20.33■□□□□ 0.85
LTBR-215ENST00000546296 TCRBV5S4A2TA0A5A2 114 aa20.32■□□□□ 0.84
LTBR-215ENST00000546296 UBE3CQ15386 1083 aa20.32■□□□□ 0.84
LTBR-215ENST00000546296 CENPQQ7L2Z9 268 aaPredicted RBP20.32■□□□□ 0.84
LTBR-215ENST00000546296 CDAN1Q8IWY9 1227 aa20.32■□□□□ 0.84
LTBR-215ENST00000546296 TGFBRAP1Q8WUH2 860 aa20.32■□□□□ 0.84
LTBR-215ENST00000546296 FSD1Q9BTV5 496 aa20.32■□□□□ 0.84
LTBR-215ENST00000546296 DDX4Q9NQI0 724 aaKnown RBP20.32■□□□□ 0.84
LTBR-215ENST00000546296 TRPM7Q96QT4 1865 aa20.31■□□□□ 0.84
LTBR-215ENST00000546296 RASSF10A6NK89 507 aa20.31■□□□□ 0.84
LTBR-215ENST00000546296 USP5P45974 858 aa20.31■□□□□ 0.84
LTBR-215ENST00000546296 GRM1Q13255 1194 aa20.31■□□□□ 0.84
LTBR-215ENST00000546296 SLFNL1Q499Z3 407 aa20.31■□□□□ 0.84
LTBR-215ENST00000546296 FZD1Q9UP38 647 aa20.31■□□□□ 0.84
LTBR-215ENST00000546296 TRIM6-TRIM34B2RNG4 842 aa20.3■□□□□ 0.84
LTBR-215ENST00000546296 RNF113AO15541 343 aaKnown RBP20.3■□□□□ 0.84
LTBR-215ENST00000546296 NPM3O75607 178 aaKnown RBP20.3■□□□□ 0.84
LTBR-215ENST00000546296 ZFYP08048 801 aaPredicted RBP20.3■□□□□ 0.84
LTBR-215ENST00000546296 IREB2P48200 963 aaKnown RBP20.3■□□□□ 0.84
LTBR-215ENST00000546296 MAPKAPK5Q8IW41 473 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms