RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 KRT222Q8N1A0 295 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 CCDC34Q96HJ3 373 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 NGLY1Q96IV0 654 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 BABAM1Q9NWV8 329 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 V9GY48 417 aaPredicted RBP11.25□□□□□ -0.61
TRAF1-203ENST00000546084 TSPY2A6NKD2 308 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 EIF6P56537 245 aaKnown RBP11.25□□□□□ -0.61
TRAF1-203ENST00000546084 NLRP5P59047 1200 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 GNG11P61952 73 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 APPBP2Q92624 585 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 MKNK2Q9HBH9 465 aa11.25□□□□□ -0.61
TRAF1-203ENST00000546084 CDKL5O76039 1030 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 CCT6AP40227 531 aaKnown RBP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 ANO1Q5XXA6 986 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 C8orf37Q96NL8 207 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 DESI2Q9BSY9 194 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 PREX1Q8TCU6 1659 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 WTIPA6NIX2 430 aaPredicted RBP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 CTIFO43310 598 aaKnown RBP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 MCM7P33993 719 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 PLA2G4DQ86XP0 818 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 DIS3L2Q8IYB7 885 aaKnown RBP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 GPR101Q96P66 508 aaPredicted RBP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 SAP30BPQ9UHR5 308 aaKnown RBP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 VWA3AA6NCI4 1184 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 CTAGE5O15320 804 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 XBP1P17861 261 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 MCAMP43121 646 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 ADKP55263 362 aaKnown RBP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 NOL10Q9BSC4 688 aaKnown RBP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 TRIM34Q9BYJ4 488 aa11.24□□□□□ -0.61
TRAF1-203ENST00000546084 PIH1D3Q9NQM4 214 aaKnown RBP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 AATFQ9NY61 560 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 HOOK1Q9UJC3 728 aaKnown RBP11.24□□□□□ -0.61
TRAF1-203ENST00000546084 PCDH11XQ9BZA7 1347 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 PCDH11YQ9BZA8 1340 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 ZNF335Q9H4Z2 1342 aaPredicted RBP11.23□□□□□ -0.61
TRAF1-203ENST00000546084 NEMFO60524 1076 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 CAVIN2O95810 425 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 DZIP1Q86YF9 867 aaKnown RBP11.23□□□□□ -0.61
TRAF1-203ENST00000546084 UBXN4Q92575 508 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 BLZF1Q9H2G9 400 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 ANGEL1Q9UNK9 670 aaKnown RBP11.23□□□□□ -0.61
TRAF1-203ENST00000546084 PFKFB1P16118 471 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 PDE6AP16499 860 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 DDB1Q16531 1140 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
TRAF1-203ENST00000546084 CAVIN4Q5BKX8 364 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 PPFIBP1Q86W92 1011 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 ZNF397Q8NF99 534 aaPredicted RBP11.23□□□□□ -0.61
TRAF1-203ENST00000546084 IL17RAQ96F46 866 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 HELLSQ9NRZ9 838 aa11.23□□□□□ -0.61
TRAF1-203ENST00000546084 GNL3LQ9NVN8 582 aaKnown RBP11.23□□□□□ -0.61
TRAF1-203ENST00000546084 SLU7O95391 586 aaKnown RBP11.23□□□□□ -0.61
TRAF1-203ENST00000546084 FOXN1O15353 648 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 TPM1P09493 284 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 RESTQ13127 1097 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 ZMYM1Q5SVZ6 1142 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 BRMS1Q9HCU9 246 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 NRKQ7Z2Y5 1582 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 SMIM22K7EJ46 135 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 PFKFB2O60825 505 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
TRAF1-203ENST00000546084 MEX3CQ5U5Q3 659 aaKnown RBP11.22□□□□□ -0.61
TRAF1-203ENST00000546084 ATG9AQ7Z3C6 839 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 CERS3Q8IU89 383 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 TEX2Q8IWB9 1127 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 DRC1Q96MC2 740 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 PXDNQ92626 1479 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 DYNLL1P63167 89 aaKnown RBP11.22□□□□□ -0.61
TRAF1-203ENST00000546084 ERCC6LQ2NKX8 1250 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 KCNG4Q8TDN1 519 aa11.22□□□□□ -0.61
TRAF1-203ENST00000546084 PUF60Q9UHX1 559 aaKnown RBP11.22□□□□□ -0.61
TRAF1-203ENST00000546084 RBM5P52756 815 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRAF1-203ENST00000546084 IFIT1BQ5T764 474 aaKnown RBP11.21□□□□□ -0.61
TRAF1-203ENST00000546084 NBPF5PQ86XG9 351 aaPredicted RBP11.21□□□□□ -0.61
TRAF1-203ENST00000546084 IQCA1Q86XH1 822 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 SMARCE1Q969G3 411 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 EPC1Q9H2F5 836 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 CPVLQ9H3G5 476 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 MCM9Q9NXL9 1143 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 ZNF609O15014 1411 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 CCDC66A2RUB6 948 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 FOXO4P98177 505 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 PICALMQ13492 652 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 NAA16Q6N069 864 aaPredicted RBP11.21□□□□□ -0.61
TRAF1-203ENST00000546084 SPATA5Q8NB90 893 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 CTCFLQ8NI51 663 aaPredicted RBP11.21□□□□□ -0.61
TRAF1-203ENST00000546084 PLEKHA4Q9H4M7 779 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 FANCLQ9NW38 375 aa11.21□□□□□ -0.61
TRAF1-203ENST00000546084 MPHOSPH10O00566 681 aaKnown RBP11.21□□□□□ -0.62
TRAF1-203ENST00000546084 MTX1Q13505 466 aa11.21□□□□□ -0.62
TRAF1-203ENST00000546084 KMT5BQ4FZB7 885 aa11.21□□□□□ -0.62
TRAF1-203ENST00000546084 TBC1D10CQ8IV04 446 aa11.21□□□□□ -0.62
TRAF1-203ENST00000546084 ZSCAN29Q8IWY8 852 aaPredicted RBP11.21□□□□□ -0.62
TRAF1-203ENST00000546084 RASGRP4Q8TDF6 673 aa11.21□□□□□ -0.62
TRAF1-203ENST00000546084 DDX41Q9UJV9 622 aaKnown RBP11.21□□□□□ -0.62
TRAF1-203ENST00000546084 KCNH3Q9ULD8 1083 aa11.21□□□□□ -0.62
TRAF1-203ENST00000546084 C6orf229H3BNL8 230 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms