RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 GTPBP3Q969Y2 492 aaKnown RBP5.35□□□□□ -1.55
MDM1-215ENST00000545964 CAMTA2O94983 1202 aa5.34□□□□□ -1.55
MDM1-215ENST00000545964 AMPD1P23109 780 aa5.34□□□□□ -1.55
MDM1-215ENST00000545964 SKIV2LQ15477 1246 aaKnown RBP5.34□□□□□ -1.55
MDM1-215ENST00000545964 SH3D19Q5HYK7 790 aa5.34□□□□□ -1.55
MDM1-215ENST00000545964 INTS6LQ5JSJ4 861 aaKnown RBP5.34□□□□□ -1.55
MDM1-215ENST00000545964 STYK1Q6J9G0 422 aa5.34□□□□□ -1.55
MDM1-215ENST00000545964 PRPF40BQ6NWY9 871 aaKnown RBP5.34□□□□□ -1.55
MDM1-215ENST00000545964 TPTE2Q6XPS3 522 aa5.34□□□□□ -1.55
MDM1-215ENST00000545964 PRICKLE2Q7Z3G6 844 aa5.34□□□□□ -1.55
MDM1-215ENST00000545964 MASTLQ96GX5 879 aa5.34□□□□□ -1.55
MDM1-215ENST00000545964 TAOK3Q9H2K8 898 aa5.34□□□□□ -1.55
MDM1-215ENST00000545964 MKRN1Q9UHC7 482 aaKnown RBP5.34□□□□□ -1.55
MDM1-215ENST00000545964 NIP7Q9Y221 180 aaKnown RBP eCLIP5.34□□□□□ -1.55
MDM1-215ENST00000545964 RRP7AQ9Y3A4 280 aaKnown RBP5.34□□□□□ -1.55
MDM1-215ENST00000545964 GPSM3Q9Y4H4 160 aa5.34□□□□□ -1.55
MDM1-215ENST00000545964 ANKRD26Q9UPS8 1709 aa5.34□□□□□ -1.56
MDM1-215ENST00000545964 CARMIL3Q8ND23 1372 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 TCERG1O14776 1098 aaKnown RBP5.33□□□□□ -1.56
MDM1-215ENST00000545964 HSPA1AP0DMV8 641 aaKnown RBP5.33□□□□□ -1.56
MDM1-215ENST00000545964 HSPA1BP0DMV9 641 aaKnown RBP5.33□□□□□ -1.56
MDM1-215ENST00000545964 SRGNP10124 158 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 NPR1P16066 1061 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 GATA4P43694 442 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 PTK2Q05397 1052 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 TAF7Q15545 349 aaPredicted RBP5.33□□□□□ -1.56
MDM1-215ENST00000545964 HLFQ16534 295 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 EAPPQ56P03 285 aaPredicted RBP5.33□□□□□ -1.56
MDM1-215ENST00000545964 OLFM4Q6UX06 510 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 CD163Q86VB7 1156 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 SYNE4Q8N205 404 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 PROCA1Q8NCQ7 364 aaPredicted RBP5.33□□□□□ -1.56
MDM1-215ENST00000545964 PNMA1Q8ND90 353 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 NUCKS1Q9H1E3 243 aaKnown RBP5.33□□□□□ -1.56
MDM1-215ENST00000545964 ZNF277Q9NRM2 450 aaPredicted RBP5.33□□□□□ -1.56
MDM1-215ENST00000545964 ZNF652Q9Y2D9 606 aa5.33□□□□□ -1.56
MDM1-215ENST00000545964 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
MDM1-215ENST00000545964 NEFMP07197 916 aa5.32□□□□□ -1.56
MDM1-215ENST00000545964 PPP2R1AP30153 589 aa5.32□□□□□ -1.56
MDM1-215ENST00000545964 ALDH1B1P30837 517 aa5.32□□□□□ -1.56
MDM1-215ENST00000545964 BRPF1P55201 1214 aaPredicted RBP5.32□□□□□ -1.56
MDM1-215ENST00000545964 LBRQ14739 615 aaKnown RBP5.32□□□□□ -1.56
MDM1-215ENST00000545964 CCDC93Q567U6 631 aa5.32□□□□□ -1.56
MDM1-215ENST00000545964 SOGA3Q5TF21 947 aa5.32□□□□□ -1.56
MDM1-215ENST00000545964 NBPF10Q6P3W6 841 aaKnown RBP5.32□□□□□ -1.56
MDM1-215ENST00000545964 CLEC4GQ6UXB4 293 aa5.32□□□□□ -1.56
MDM1-215ENST00000545964 NBPF15Q8N660 670 aa5.32□□□□□ -1.56
MDM1-215ENST00000545964 GAS2L1Q99501 681 aaPredicted RBP5.32□□□□□ -1.56
MDM1-215ENST00000545964 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.32□□□□□ -1.56
MDM1-215ENST00000545964 GJA3Q9Y6H8 435 aa5.32□□□□□ -1.56
MDM1-215ENST00000545964 KIF13BQ9NQT8 1826 aa5.32□□□□□ -1.56
MDM1-215ENST00000545964 COL5A3P25940 1745 aaPredicted RBP5.31□□□□□ -1.56
MDM1-215ENST00000545964 KIAA1551Q9HCM1 1747 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 ZNF831Q5JPB2 1677 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 IQCA1LA6NCM1 817 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 HTATSF1O43719 755 aaKnown RBP5.31□□□□□ -1.56
MDM1-215ENST00000545964 MYL6BP14649 208 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 GPTP24298 496 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 LINC00114Q6XXX2 140 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 RTKN2Q8IZC4 609 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 IL27Q8NEV9 243 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 C7orf43Q8WVR3 580 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 JDP2Q8WYK2 163 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 TAF1DQ9H5J8 278 aaPredicted RBP5.31□□□□□ -1.56
MDM1-215ENST00000545964 TJP1Q07157 1748 aa5.31□□□□□ -1.56
MDM1-215ENST00000545964 SCN11AQ9UI33 1791 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 KLRG2A4D1S0 409 aaPredicted RBP5.3□□□□□ -1.56
MDM1-215ENST00000545964 SPDYE3A6NKU9 549 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 SHISA8B8ZZ34 492 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 F11P03951 625 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 RHOQP17081 205 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 EIF2S2P20042 333 aaKnown RBP5.3□□□□□ -1.56
MDM1-215ENST00000545964 EPHX2P34913 555 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 IARSP41252 1262 aaKnown RBP5.3□□□□□ -1.56
MDM1-215ENST00000545964 FKBP4Q02790 459 aaKnown RBP eCLIP5.3□□□□□ -1.56
MDM1-215ENST00000545964 CTDSPL2Q05D32 466 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 DOC2BQ14184 412 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 MAP1SQ66K74 1059 aaPredicted RBP5.3□□□□□ -1.56
MDM1-215ENST00000545964 PPP2R2DQ66LE6 453 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 KIF6Q6ZMV9 814 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 SLCO4C1Q6ZQN7 724 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 TTLL7Q6ZT98 887 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 LDHDQ86WU2 507 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 CNTROBQ8N137 903 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 RPGRQ92834 1020 aaKnown RBP5.3□□□□□ -1.56
MDM1-215ENST00000545964 AIDAQ96BJ3 306 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 THUMPD2Q9BTF0 503 aaKnown RBP5.3□□□□□ -1.56
MDM1-215ENST00000545964 NYXQ9GZU5 481 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 HACL1Q9UJ83 578 aa5.3□□□□□ -1.56
MDM1-215ENST00000545964 CEMIPQ8WUJ3 1361 aa5.29□□□□□ -1.56
MDM1-215ENST00000545964 ZNF541Q9H0D2 1346 aa5.29□□□□□ -1.56
MDM1-215ENST00000545964 LTBP3Q9NS15 1303 aa5.29□□□□□ -1.56
MDM1-215ENST00000545964 MRC1P22897 1456 aa5.29□□□□□ -1.56
MDM1-215ENST00000545964 TMEM88BA6NKF7 163 aa5.29□□□□□ -1.56
MDM1-215ENST00000545964 TXKP42681 527 aa5.29□□□□□ -1.56
MDM1-215ENST00000545964 EIF6P56537 245 aaKnown RBP5.29□□□□□ -1.56
MDM1-215ENST00000545964 EIF4A1P60842 406 aaKnown RBP5.29□□□□□ -1.56
MDM1-215ENST00000545964 GRM1Q13255 1194 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms