RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 SUGT1Q9Y2Z0 365 aa9.32□□□□□ -0.92
COPA-207ENST00000545284 RPAP1Q9BWH6 1393 aaPredicted RBP9.32□□□□□ -0.92
COPA-207ENST00000545284 TNPO2O14787 897 aaKnown RBP9.31□□□□□ -0.92
COPA-207ENST00000545284 TAF5LO75529 589 aa9.31□□□□□ -0.92
COPA-207ENST00000545284 MOGSQ13724 837 aa9.31□□□□□ -0.92
COPA-207ENST00000545284 UBE4AQ14139 1066 aa9.31□□□□□ -0.92
COPA-207ENST00000545284 GCKRQ14397 625 aa9.31□□□□□ -0.92
COPA-207ENST00000545284 NOL9Q5SY16 702 aaKnown RBP9.31□□□□□ -0.92
COPA-207ENST00000545284 TEKT1Q969V4 418 aa9.31□□□□□ -0.92
COPA-207ENST00000545284 COA7Q96BR5 231 aa9.31□□□□□ -0.92
COPA-207ENST00000545284 ZDHHC15Q96MV8 337 aa9.31□□□□□ -0.92
COPA-207ENST00000545284 GUCD1Q96NT3 240 aa9.31□□□□□ -0.92
COPA-207ENST00000545284 GABRQQ9UN88 632 aa9.31□□□□□ -0.92
COPA-207ENST00000545284 VCANP13611 3396 aa9.3□□□□□ -0.92
COPA-207ENST00000545284 HIBADHP31937 336 aaKnown RBP9.3□□□□□ -0.92
COPA-207ENST00000545284 CASP7P55210 303 aa9.3□□□□□ -0.92
COPA-207ENST00000545284 CWF19L2Q2TBE0 894 aaKnown RBP9.3□□□□□ -0.92
COPA-207ENST00000545284 CCER1Q8TC90 406 aaPredicted RBP9.3□□□□□ -0.92
COPA-207ENST00000545284 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.3□□□□□ -0.92
COPA-207ENST00000545284 C11orf49Q9H6J7 331 aa9.3□□□□□ -0.92
COPA-207ENST00000545284 HMX1Q9NP08 348 aaPredicted RBP9.3□□□□□ -0.92
COPA-207ENST00000545284 ZMYND8Q9ULU4 1186 aaPredicted RBP9.3□□□□□ -0.92
COPA-207ENST00000545284 ECM29Q5VYK3 1845 aa9.3□□□□□ -0.92
COPA-207ENST00000545284 MAST3O60307 1309 aa9.3□□□□□ -0.92
COPA-207ENST00000545284 SNAP23O00161 211 aa9.29□□□□□ -0.92
COPA-207ENST00000545284 HMGCRP04035 888 aa9.29□□□□□ -0.92
COPA-207ENST00000545284 ELNP15502 786 aa9.29□□□□□ -0.92
COPA-207ENST00000545284 COL9A1P20849 921 aa9.29□□□□□ -0.92
COPA-207ENST00000545284 RALBP1Q15311 655 aa9.29□□□□□ -0.92
COPA-207ENST00000545284 GPAT2Q6NUI2 795 aa9.29□□□□□ -0.92
COPA-207ENST00000545284 HHIPL2Q6UWX4 724 aa9.29□□□□□ -0.92
COPA-207ENST00000545284 LDHAL6AQ6ZMR3 332 aa9.29□□□□□ -0.92
COPA-207ENST00000545284 STK31Q9BXU1 1019 aa9.29□□□□□ -0.92
COPA-207ENST00000545284 OGDHLQ9ULD0 1010 aa9.29□□□□□ -0.92
COPA-207ENST00000545284 SPTBN5Q9NRC6 3674 aaKnown RBP9.28□□□□□ -0.92
COPA-207ENST00000545284 A0A0G2JLL6 359 aaPredicted RBP9.28□□□□□ -0.92
COPA-207ENST00000545284 ELL2O00472 640 aaPredicted RBP9.28□□□□□ -0.92
COPA-207ENST00000545284 CYP2C8P10632 490 aa9.28□□□□□ -0.92
COPA-207ENST00000545284 INPP5BP32019 993 aa9.28□□□□□ -0.92
COPA-207ENST00000545284 ZNF697Q5TEC3 545 aa9.28□□□□□ -0.92
COPA-207ENST00000545284 APOBEC3HQ6NTF7 200 aaKnown RBP9.28□□□□□ -0.92
COPA-207ENST00000545284 PRRT2Q7Z6L0 340 aaPredicted RBP9.28□□□□□ -0.92
COPA-207ENST00000545284 LINS1Q8NG48 757 aa9.28□□□□□ -0.92
COPA-207ENST00000545284 DIS3LQ8TF46 1054 aaKnown RBP9.28□□□□□ -0.92
COPA-207ENST00000545284 FAM151AQ8WW52 585 aa9.28□□□□□ -0.92
COPA-207ENST00000545284 FAM84BQ96KN1 310 aaPredicted RBP9.28□□□□□ -0.92
COPA-207ENST00000545284 COL2A1P02458 1487 aaPredicted RBP9.28□□□□□ -0.92
COPA-207ENST00000545284 OTOFQ9HC10 1997 aa9.27□□□□□ -0.93
COPA-207ENST00000545284 ECM2O94769 699 aaPredicted RBP9.27□□□□□ -0.93
COPA-207ENST00000545284 SYN1P17600 705 aa9.27□□□□□ -0.93
COPA-207ENST00000545284 FAM110CQ1W6H9 321 aa9.27□□□□□ -0.93
COPA-207ENST00000545284 CCDC57Q2TAC2 916 aa9.27□□□□□ -0.93
COPA-207ENST00000545284 MIGA2Q7L4E1 593 aa9.27□□□□□ -0.93
COPA-207ENST00000545284 FBXO33Q7Z6M2 555 aa9.27□□□□□ -0.93
COPA-207ENST00000545284 MAFAQ8NHW3 353 aaPredicted RBP9.27□□□□□ -0.93
COPA-207ENST00000545284 SMCR8Q8TEV9 937 aaPredicted RBP9.27□□□□□ -0.93
COPA-207ENST00000545284 JAG2Q9Y219 1238 aa9.27□□□□□ -0.93
COPA-207ENST00000545284 COL6A1P12109 1028 aa9.26□□□□□ -0.93
COPA-207ENST00000545284 PLA2G5P39877 138 aa9.26□□□□□ -0.93
COPA-207ENST00000545284 GCLCP48506 637 aaPredicted RBP9.26□□□□□ -0.93
COPA-207ENST00000545284 FOXO4P98177 505 aa9.26□□□□□ -0.93
COPA-207ENST00000545284 VPS37DQ86XT2 251 aa9.26□□□□□ -0.93
COPA-207ENST00000545284 TRMT44Q8IYL2 757 aaKnown RBP9.26□□□□□ -0.93
COPA-207ENST00000545284 C8orf58Q8NAV2 365 aa9.26□□□□□ -0.93
COPA-207ENST00000545284 CDX2Q99626 313 aaPredicted RBP9.26□□□□□ -0.93
COPA-207ENST00000545284 LBHD1Q9BQE6 289 aaPredicted RBP9.26□□□□□ -0.93
COPA-207ENST00000545284 SEMA6BQ9H3T3 888 aa9.26□□□□□ -0.93
COPA-207ENST00000545284 CNNM1Q9NRU3 951 aa9.26□□□□□ -0.93
COPA-207ENST00000545284 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
COPA-207ENST00000545284 TMEM265A0A087WTH1 108 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 TNFRSF10AO00220 468 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 XRCC5P13010 732 aaKnown RBP9.25□□□□□ -0.93
COPA-207ENST00000545284 GYG1P46976 350 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 CACNB3P54284 484 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 CAVIN4Q5BKX8 364 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 TAF7LQ5H9L4 462 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 TJAP1Q5JTD0 557 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 MAP3K21Q5TCX8 1036 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 CCDC146Q8IYE0 955 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 SPINK5Q9NQ38 1064 aaPredicted RBP9.25□□□□□ -0.93
COPA-207ENST00000545284 PICK1Q9NRD5 415 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 GJD2Q9UKL4 321 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 AFG3L2Q9Y4W6 797 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 ARIH1Q9Y4X5 557 aaPredicted RBP9.25□□□□□ -0.93
COPA-207ENST00000545284 ZHX2Q9Y6X8 837 aa9.25□□□□□ -0.93
COPA-207ENST00000545284 FRAT2O75474 233 aaPredicted RBP9.24□□□□□ -0.93
COPA-207ENST00000545284 PTPRAP18433 802 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 MAP3K10Q02779 954 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 PABPC4Q13310 644 aaKnown RBP eCLIP9.24□□□□□ -0.93
COPA-207ENST00000545284 WDR43Q15061 677 aaKnown RBP eCLIP9.24□□□□□ -0.931e-6■■□□□ 11.8
COPA-207ENST00000545284 SCYL3Q8IZE3 742 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 DNAAF4Q8WXU2 420 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 FAM122AQ96E09 287 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 TBC1D2Q9BYX2 928 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 TAOK2Q9UL54 1235 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 AGTPBP1Q9UPW5 1226 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 PFASO15067 1338 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 MROH5Q6ZUA9 1318 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 KIF16BQ96L93 1317 aa9.24□□□□□ -0.93
COPA-207ENST00000545284 ZSWIM8A7E2V4 1837 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms