RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 USP27XA6NNY8 438 aa9.97□□□□□ -0.81
CCDC7-210ENST00000545067 SSBP05455 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC7-210ENST00000545067 TXLNAP40222 546 aa9.97□□□□□ -0.81
CCDC7-210ENST00000545067 MCAMP43121 646 aa9.97□□□□□ -0.81
CCDC7-210ENST00000545067 GYG1P46976 350 aa9.97□□□□□ -0.81
CCDC7-210ENST00000545067 RFX5P48382 616 aaPredicted RBP9.97□□□□□ -0.81
CCDC7-210ENST00000545067 CCDC152Q4G0S7 254 aa9.97□□□□□ -0.81
CCDC7-210ENST00000545067 DZIP1Q86YF9 867 aaKnown RBP9.97□□□□□ -0.81
CCDC7-210ENST00000545067 ZBTB38Q8NAP3 1195 aaPredicted RBP9.97□□□□□ -0.81
CCDC7-210ENST00000545067 SPATA5Q8NB90 893 aa9.97□□□□□ -0.81
CCDC7-210ENST00000545067 PIGBQ92521 554 aa9.97□□□□□ -0.81
CCDC7-210ENST00000545067 RNF41Q9H4P4 317 aaPredicted RBP9.97□□□□□ -0.81
CCDC7-210ENST00000545067 PIH1D3Q9NQM4 214 aaKnown RBP9.97□□□□□ -0.81
CCDC7-210ENST00000545067 USP42Q9H9J4 1324 aaKnown RBP9.96□□□□□ -0.81
CCDC7-210ENST00000545067 A0A0U1RQG5 324 aaPredicted RBP9.96□□□□□ -0.81
CCDC7-210ENST00000545067 NPHP4O75161 1426 aaPredicted RBP9.96□□□□□ -0.81
CCDC7-210ENST00000545067 CTSWP56202 376 aa9.96□□□□□ -0.81
CCDC7-210ENST00000545067 MYL5Q02045 173 aa9.96□□□□□ -0.81
CCDC7-210ENST00000545067 KIF4BQ2VIQ3 1234 aa9.96□□□□□ -0.81
CCDC7-210ENST00000545067 KRI1Q8N9T8 703 aaKnown RBP9.96□□□□□ -0.81
CCDC7-210ENST00000545067 LINC00301Q8NCQ3 95 aa9.96□□□□□ -0.81
CCDC7-210ENST00000545067 EEF2KMTQ96G04 330 aa9.96□□□□□ -0.81
CCDC7-210ENST00000545067 TFCP2L1Q9NZI6 479 aa9.96□□□□□ -0.81
CCDC7-210ENST00000545067 CGNQ9P2M7 1197 aaKnown RBP9.96□□□□□ -0.81
CCDC7-210ENST00000545067 ITSN1Q15811 1721 aa9.96□□□□□ -0.81
CCDC7-210ENST00000545067 VWA3AA6NCI4 1184 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 ERVV-2B6SEH9 535 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 SLU7O95391 586 aaKnown RBP9.96□□□□□ -0.82
CCDC7-210ENST00000545067 PUM3Q15397 648 aaKnown RBP9.96□□□□□ -0.82
CCDC7-210ENST00000545067 TMCO3Q6UWJ1 677 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 CCDC150Q8NCX0 1101 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 CCDC12Q8WUD4 166 aaPredicted RBP9.96□□□□□ -0.82
CCDC7-210ENST00000545067 KRT23Q9C075 422 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.96□□□□□ -0.82
CCDC7-210ENST00000545067 SH3TC1Q8TE82 1336 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 DIP2BQ9P265 1576 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 PDE8AO60658 829 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 ADKP55263 362 aaKnown RBP9.96□□□□□ -0.82
CCDC7-210ENST00000545067 ESR2Q92731 530 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 ZHX3Q9H4I2 956 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 FANCLQ9NW38 375 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 CEP131Q9UPN4 1083 aa9.96□□□□□ -0.82
CCDC7-210ENST00000545067 MAGEB6P1A0A0J9YX57 407 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 CASQ1P31415 396 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 MCM7P33993 719 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 CCT6AP40227 531 aaKnown RBP9.95□□□□□ -0.82
CCDC7-210ENST00000545067 NR5A1Q13285 461 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 IFNL3Q8IZI9 196 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 NFE2L3Q9Y4A8 694 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 CYP2D7A0A087X1C5 515 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 TRIM75PA6NK02 468 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 UBE2Q2LH0YL09 131 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 CCP110O43303 1012 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 ZSCAN12O43309 604 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 CLSTN1O94985 981 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 PDE8BO95263 885 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 CTDNEP1O95476 244 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 DDB1Q16531 1140 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 APOA5Q6Q788 366 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 SMIM5Q71RC9 77 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.95□□□□□ -0.82
CCDC7-210ENST00000545067 ANKRD18AQ8IVF6 992 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
CCDC7-210ENST00000545067 NUP88Q99567 741 aaPredicted RBP9.95□□□□□ -0.82
CCDC7-210ENST00000545067 PCDHA5Q9Y5H7 936 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 DLG5Q8TDM6 1919 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 N4BP3O15049 544 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 PCCAP05165 728 aaPredicted RBP9.95□□□□□ -0.82
CCDC7-210ENST00000545067 DNA2P51530 1060 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 ERCC6LQ2NKX8 1250 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 CAGE1Q8TC20 777 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 LPIN2Q92539 896 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 CDC5LQ99459 802 aaKnown RBP9.95□□□□□ -0.82
CCDC7-210ENST00000545067 DESI2Q9BSY9 194 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 SERTAD1Q9UHV2 236 aa9.95□□□□□ -0.82
CCDC7-210ENST00000545067 ERCC3P19447 782 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 NLRP12P59046 1061 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 ENOX2Q16206 610 aaKnown RBP9.94□□□□□ -0.82
CCDC7-210ENST00000545067 FAM47AQ5JRC9 791 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 TBC1D10CQ8IV04 446 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 SENP2Q9HC62 589 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 MED23Q9ULK4 1368 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 YEATS4O95619 227 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 KIF23Q02241 960 aaPredicted RBP9.94□□□□□ -0.82
CCDC7-210ENST00000545067 RRAGBQ5VZM2 374 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 GIGYF2Q6Y7W6 1299 aaKnown RBP9.94□□□□□ -0.82
CCDC7-210ENST00000545067 TTLL11Q8NHH1 800 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 UIMC1Q96RL1 719 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 RTEL1Q9NZ71 1219 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 ZSWIM5Q9P217 1185 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 VIRMAQ69YN4 1812 aaKnown RBP9.94□□□□□ -0.82
CCDC7-210ENST00000545067 KIF2AO00139 706 aaPredicted RBP9.94□□□□□ -0.82
CCDC7-210ENST00000545067 EIF5P55010 431 aaKnown RBP9.94□□□□□ -0.82
CCDC7-210ENST00000545067 RABL6Q3YEC7 729 aaPredicted RBP9.94□□□□□ -0.82
CCDC7-210ENST00000545067 LONRF3Q496Y0 759 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 CYB5R4Q7L1T6 521 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 NLRP10Q86W26 655 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 CCDC47Q96A33 483 aaKnown RBP9.94□□□□□ -0.82
CCDC7-210ENST00000545067 CNNM2Q9H8M5 875 aa9.94□□□□□ -0.82
CCDC7-210ENST00000545067 MAGEC2Q9UBF1 373 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms