RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 HS2ST1Q7LGA3 356 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 STK35Q8TDR2 534 aa3.96□□□□□ -1.78
YBX3-214ENST00000544501 CCDC86Q9H6F5 360 aaKnown RBP3.96□□□□□ -1.78
YBX3-214ENST00000544501 E9PSI1 815 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 AOC2O75106 756 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 ALX3O95076 343 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 TIAF1O95411 115 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 ECEL1O95672 775 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 CTSBP07858 339 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 ZNF76P36508 570 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 RBM25P49756 843 aaKnown RBP3.95□□□□□ -1.78
YBX3-214ENST00000544501 LIG3P49916 1009 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 FANCCQ00597 558 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 PDE3AQ14432 1141 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 MAP1SQ66K74 1059 aaPredicted RBP3.95□□□□□ -1.78
YBX3-214ENST00000544501 FDX2Q6P4F2 183 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 ERMP1Q7Z2K6 904 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 CCDC84Q86UT8 332 aaPredicted RBP3.95□□□□□ -1.78
YBX3-214ENST00000544501 RELL1Q8IUW5 271 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 AGGF1Q8N302 714 aaeCLIP3.95□□□□□ -1.78
YBX3-214ENST00000544501 C12orf50Q8NA57 414 aaPredicted RBP3.95□□□□□ -1.78
YBX3-214ENST00000544501 KCNB2Q92953 911 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 FAM46AQ96IP4 442 aaKnown RBP3.95□□□□□ -1.78
YBX3-214ENST00000544501 SSBP4Q9BWG4 385 aaPredicted RBP3.95□□□□□ -1.78
YBX3-214ENST00000544501 CBX8Q9HC52 389 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 RAD18Q9NS91 495 aa3.95□□□□□ -1.78
YBX3-214ENST00000544501 MSTNO14793 375 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 ZNF862O60290 1169 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 GLB1P16278 677 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 LMNB1P20700 586 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 SOX4Q06945 474 aaPredicted RBP3.94□□□□□ -1.78
YBX3-214ENST00000544501 RASIP1Q5U651 963 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 DIEXFQ68CQ4 756 aaKnown RBP3.94□□□□□ -1.78
YBX3-214ENST00000544501 TRIM42Q8IWZ5 723 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 PHC3Q8NDX5 983 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 GRIN3AQ8TCU5 1115 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 RNF34Q969K3 372 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 ZNF428Q96B54 188 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 TMEM74Q96NL1 305 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 SPOCK3Q9BQ16 436 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 WDR18Q9BV38 432 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 ZC3H12CQ9C0D7 883 aaKnown RBP3.94□□□□□ -1.78
YBX3-214ENST00000544501 GGT7Q9UJ14 662 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 HIF3AQ9Y2N7 669 aa3.94□□□□□ -1.78
YBX3-214ENST00000544501 SART1O43290 800 aaKnown RBP3.93□□□□□ -1.78
YBX3-214ENST00000544501 PROCP04070 461 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 ADH5P11766 374 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 LIG1P18858 919 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 LMNB2Q03252 620 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 ZC3H12AQ5D1E8 599 aaKnown RBP3.93□□□□□ -1.78
YBX3-214ENST00000544501 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.93□□□□□ -1.78
YBX3-214ENST00000544501 GPBAR1Q8TDU6 330 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 WDR89Q96FK6 387 aaPredicted RBP3.93□□□□□ -1.78
YBX3-214ENST00000544501 ACSBG1Q96GR2 724 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 MEGF10Q96KG7 1140 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 RHOVQ96L33 236 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 UBL7Q96S82 380 aaPredicted RBP3.93□□□□□ -1.78
YBX3-214ENST00000544501 MIR1-1HGQ9H1L0 117 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 GSX1Q9H4S2 264 aaPredicted RBP3.93□□□□□ -1.78
YBX3-214ENST00000544501 KCNQ5Q9NR82 932 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 PCDHGC5Q9Y5F6 944 aa3.93□□□□□ -1.78
YBX3-214ENST00000544501 H2AFB1P0C5Y9 115 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 H2AFB2P0C5Z0 115 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 DRD2P14416 443 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 TFE3P19532 575 aaPredicted RBP3.92□□□□□ -1.78
YBX3-214ENST00000544501 GBP2P32456 591 aaPredicted RBP3.92□□□□□ -1.78
YBX3-214ENST00000544501 PREPP48147 710 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 ERVK-24P63145 666 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 ID3Q02535 119 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 CAMK2GQ13555 558 aaPredicted RBP3.92□□□□□ -1.78
YBX3-214ENST00000544501 MAP3K11Q16584 847 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 AKAP4Q5JQC9 854 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 GPAT2Q6NUI2 795 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 C2CD4AQ8NCU7 369 aaPredicted RBP3.92□□□□□ -1.78
YBX3-214ENST00000544501 GAL3ST3Q96A11 431 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 MYRFLQ96LU7 910 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 ATXN3LQ9H3M9 355 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 KBTBD4Q9NVX7 518 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 CRIM1Q9NZV1 1036 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 TLR6Q9Y2C9 796 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 TACC3Q9Y6A5 838 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 SNCAIPQ9Y6H5 919 aa3.92□□□□□ -1.78
YBX3-214ENST00000544501 ROBO2Q9HCK4 1378 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.91□□□□□ -1.78
YBX3-214ENST00000544501 TMPRSS2O15393 492 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 DHX15O43143 795 aaKnown RBP3.91□□□□□ -1.78
YBX3-214ENST00000544501 GAS2O43903 313 aaKnown RBP3.91□□□□□ -1.78
YBX3-214ENST00000544501 PF4P02776 101 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 EIF4A3P38919 411 aaKnown RBP3.91□□□□□ -1.78
YBX3-214ENST00000544501 HDLBPQ00341 1268 aaKnown RBP3.91□□□□□ -1.78
YBX3-214ENST00000544501 RING1Q06587 406 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 MPRIPQ6WCQ1 1025 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 DYMQ7RTS9 669 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 HDXQ7Z353 690 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 SLC51AQ86UW1 340 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 METTL16Q86W50 562 aaKnown RBP3.91□□□□□ -1.78
YBX3-214ENST00000544501 FAM20CQ8IXL6 584 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 ARMC10Q8N2F6 343 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 GATAD2BQ8WXI9 593 aa3.91□□□□□ -1.78
YBX3-214ENST00000544501 EZH1Q92800 747 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms