RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 TRIM44Q96DX7 344 aaPredicted RBP19.98■□□□□ 0.79
PTPRO-209ENST00000543886 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.98■□□□□ 0.79
PTPRO-209ENST00000543886 KLRK1P26718 216 aa19.98■□□□□ 0.79
PTPRO-209ENST00000543886 TM4SF1P30408 202 aa19.98■□□□□ 0.79
PTPRO-209ENST00000543886 NFXL1Q6ZNB6 911 aa19.98■□□□□ 0.79
PTPRO-209ENST00000543886 ADGRA1Q86SQ6 560 aa19.98■□□□□ 0.79
PTPRO-209ENST00000543886 CACNA1SQ13698 1873 aa19.97■□□□□ 0.79
PTPRO-209ENST00000543886 FDPSP14324 419 aaKnown RBP19.97■□□□□ 0.79
PTPRO-209ENST00000543886 HIBADHP31937 336 aaKnown RBP19.97■□□□□ 0.79
PTPRO-209ENST00000543886 METAP2P50579 478 aaKnown RBP eCLIP19.97■□□□□ 0.79
PTPRO-209ENST00000543886 TMEM67Q5HYA8 995 aa19.97■□□□□ 0.79
PTPRO-209ENST00000543886 STAG1Q8WVM7 1258 aa19.97■□□□□ 0.79
PTPRO-209ENST00000543886 PPP1R9BQ96SB3 815 aa19.97■□□□□ 0.79
PTPRO-209ENST00000543886 ORC3Q9UBD5 711 aaPredicted RBP19.97■□□□□ 0.79
PTPRO-209ENST00000543886 UBR3Q6ZT12 1888 aa19.97■□□□□ 0.79
PTPRO-209ENST00000543886 PDS5AQ29RF7 1337 aaKnown RBP19.97■□□□□ 0.79
PTPRO-209ENST00000543886 KDM4AO75164 1064 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 GUCY1B3Q02153 619 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 KLHL34Q8N239 644 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 NKX2-3Q8TAU0 364 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 TFCP2L1Q9NZI6 479 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 SLC27A3Q5K4L6 730 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 RNF214Q8ND24 703 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 IGDCC4Q8TDY8 1250 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 C8orf76Q96K31 380 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 ZNF396Q96N95 335 aaPredicted RBP19.96■□□□□ 0.79
PTPRO-209ENST00000543886 RNF41Q9H4P4 317 aaPredicted RBP19.96■□□□□ 0.79
PTPRO-209ENST00000543886 INCENPQ9NQS7 918 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 TOMM22Q9NS69 142 aa19.96■□□□□ 0.79
PTPRO-209ENST00000543886 CDKL5O76039 1030 aa19.95■□□□□ 0.78
PTPRO-209ENST00000543886 ATL3Q6DD88 541 aa19.95■□□□□ 0.78
PTPRO-209ENST00000543886 CPLX2Q6PUV4 134 aaKnown RBP19.95■□□□□ 0.78
PTPRO-209ENST00000543886 APOA5Q6Q788 366 aa19.95■□□□□ 0.78
PTPRO-209ENST00000543886 LY9Q9HBG7 655 aa19.95■□□□□ 0.78
PTPRO-209ENST00000543886 ZSWIM5Q9P217 1185 aa19.95■□□□□ 0.78
PTPRO-209ENST00000543886 IFIT3O14879 490 aaKnown RBP19.95■□□□□ 0.78
PTPRO-209ENST00000543886 ZBTB43O43298 467 aa19.95■□□□□ 0.78
PTPRO-209ENST00000543886 GRAPQ13588 217 aa19.95■□□□□ 0.78
PTPRO-209ENST00000543886 RRP12Q5JTH9 1297 aaKnown RBP19.95■□□□□ 0.78
PTPRO-209ENST00000543886 GRAPLQ8TC17 118 aaPredicted RBP19.95■□□□□ 0.78
PTPRO-209ENST00000543886 PPARAQ07869 468 aa19.94■□□□□ 0.78
PTPRO-209ENST00000543886 SART3Q15020 963 aaKnown RBP19.94■□□□□ 0.78
PTPRO-209ENST00000543886 KRT27Q7Z3Y8 459 aa19.94■□□□□ 0.78
PTPRO-209ENST00000543886 SGMS1Q86VZ5 419 aa19.94■□□□□ 0.78
PTPRO-209ENST00000543886 MICU3Q86XE3 530 aa19.94■□□□□ 0.78
PTPRO-209ENST00000543886 SDR42E1Q8WUS8 393 aa19.94■□□□□ 0.78
PTPRO-209ENST00000543886 RIOK1Q9BRS2 568 aaKnown RBP19.94■□□□□ 0.78
PTPRO-209ENST00000543886 CCDC69A6NI79 296 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 LIFRP42702 1097 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 BICD2Q8TD16 824 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 ANKIB1Q9P2G1 1089 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 MAST2Q6P0Q8 1798 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 EP400Q96L91 3159 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 BRWD3Q6RI45 1802 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 LIG1P18858 919 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 CHAF1AQ13111 956 aaPredicted RBP19.93■□□□□ 0.78
PTPRO-209ENST00000543886 SENP2Q9HC62 589 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 SLC12A7Q9Y666 1083 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 TACC3Q9Y6A5 838 aa19.93■□□□□ 0.78
PTPRO-209ENST00000543886 GOLGA8AA7E2F4 631 aa19.92■□□□□ 0.78
PTPRO-209ENST00000543886 ADD1P35611 737 aaKnown RBP19.92■□□□□ 0.78
PTPRO-209ENST00000543886 ST5P78524 1137 aa19.92■□□□□ 0.78
PTPRO-209ENST00000543886 CEBPZQ03701 1054 aaKnown RBP19.92■□□□□ 0.78
PTPRO-209ENST00000543886 PRR5LQ6MZQ0 368 aa19.92■□□□□ 0.78
PTPRO-209ENST00000543886 GIMAP6Q6P9H5 292 aa19.92■□□□□ 0.78
PTPRO-209ENST00000543886 SYNE3Q6ZMZ3 975 aa19.92■□□□□ 0.78
PTPRO-209ENST00000543886 RPGRQ92834 1020 aaKnown RBP19.92■□□□□ 0.78
PTPRO-209ENST00000543886 NUP62CLQ9H1M0 184 aa19.92■□□□□ 0.78
PTPRO-209ENST00000543886 ERICH2A1L162 156 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 MINDY4BA8MYZ0 360 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 RXRAP19793 462 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 FBXO18Q8NFZ0 1043 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 TRIM37O94972 964 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 GYS1P13807 737 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 DYNLL1P63167 89 aaKnown RBP19.91■□□□□ 0.78
PTPRO-209ENST00000543886 MECOMQ03112 1051 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 STK11IPQ8N1F8 1099 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 NSUN4Q96CB9 384 aaKnown RBP19.91■□□□□ 0.78
PTPRO-209ENST00000543886 PGBD1Q96JS3 809 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 BRIP1Q9BX63 1249 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 DDX19AQ9NUU7 478 aaKnown RBP19.91■□□□□ 0.78
PTPRO-209ENST00000543886 ANAPC4Q9UJX5 808 aa19.91■□□□□ 0.78
PTPRO-209ENST00000543886 CCDC144CPQ8IYA2 1237 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 MTA3Q9BTC8 594 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 DACT1Q9NYF0 836 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 LEMD3Q9Y2U8 911 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 XDHP47989 1333 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 WTAPQ15007 396 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 OTUD7BQ6GQQ9 843 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 ILDR1Q86SU0 546 aaPredicted RBP19.9■□□□□ 0.78
PTPRO-209ENST00000543886 RGS22Q8NE09 1264 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 ZNF384Q8TF68 577 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 USP28Q96RU2 1077 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 RCOR1Q9UKL0 485 aa19.9■□□□□ 0.78
PTPRO-209ENST00000543886 CCDC88AQ3V6T2 1871 aa19.89■□□□□ 0.78
PTPRO-209ENST00000543886 CDC27P30260 824 aa19.89■□□□□ 0.77
PTPRO-209ENST00000543886 MAP3K11Q16584 847 aa19.89■□□□□ 0.77
PTPRO-209ENST00000543886 TMED8Q6PL24 325 aaPredicted RBP19.89■□□□□ 0.77
PTPRO-209ENST00000543886 TXNRD3Q86VQ6 643 aa19.89■□□□□ 0.77
PTPRO-209ENST00000543886 UBAC1Q9BSL1 405 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms