RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 CTSWP56202 376 aa11.28□□□□□ -0.6
CD4-211ENST00000543755 SMAD3P84022 425 aaKnown RBP11.28□□□□□ -0.6
CD4-211ENST00000543755 GRIN2CQ14957 1233 aa11.28□□□□□ -0.6
CD4-211ENST00000543755 ZNF804AQ7Z570 1209 aa11.28□□□□□ -0.6
CD4-211ENST00000543755 SMCR8Q8TEV9 937 aaPredicted RBP11.28□□□□□ -0.6
CD4-211ENST00000543755 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
CD4-211ENST00000543755 PNNQ9H307 717 aaKnown RBP11.28□□□□□ -0.6
CD4-211ENST00000543755 EPHX3Q9H6B9 360 aa11.28□□□□□ -0.6
CD4-211ENST00000543755 CWC25Q9NXE8 425 aaPredicted RBP11.28□□□□□ -0.6
CD4-211ENST00000543755 SERPINA10Q9UK55 444 aa11.28□□□□□ -0.6
CD4-211ENST00000543755 DDX60LQ5H9U9 1706 aaKnown RBP11.28□□□□□ -0.6
CD4-211ENST00000543755 PIEZO1Q92508 2521 aa11.27□□□□□ -0.61
CD4-211ENST00000543755 KLRK1P26718 216 aa11.27□□□□□ -0.61
CD4-211ENST00000543755 C9orf50Q5SZB4 431 aa11.27□□□□□ -0.61
CD4-211ENST00000543755 MYD88Q99836 296 aa11.27□□□□□ -0.61
CD4-211ENST00000543755 TMOD2Q9NZR1 351 aa11.27□□□□□ -0.61
CD4-211ENST00000543755 OGDHLQ9ULD0 1010 aa11.27□□□□□ -0.61
CD4-211ENST00000543755 MGAMO43451 1857 aa11.26□□□□□ -0.61
CD4-211ENST00000543755 FAM86C2PA6NEL3 165 aa11.26□□□□□ -0.61
CD4-211ENST00000543755 PDE3AQ14432 1141 aa11.26□□□□□ -0.61
CD4-211ENST00000543755 DZIP1LQ8IYY4 767 aaKnown RBP11.26□□□□□ -0.61
CD4-211ENST00000543755 JARID2Q92833 1246 aaPredicted RBP11.26□□□□□ -0.61
CD4-211ENST00000543755 ZNF341Q9BYN7 854 aa11.26□□□□□ -0.61
CD4-211ENST00000543755 GREM2Q9H772 168 aa11.26□□□□□ -0.61
CD4-211ENST00000543755 TTF2Q9UNY4 1162 aaKnown RBP11.26□□□□□ -0.61
CD4-211ENST00000543755 DLG5Q8TDM6 1919 aa11.25□□□□□ -0.61
CD4-211ENST00000543755 CCDC85BQ15834 202 aaPredicted RBP11.25□□□□□ -0.61
CD4-211ENST00000543755 FASTKD5Q7L8L6 764 aaKnown RBP11.25□□□□□ -0.61
CD4-211ENST00000543755 TTLL11Q8NHH1 800 aa11.25□□□□□ -0.61
CD4-211ENST00000543755 JAG2Q9Y219 1238 aa11.25□□□□□ -0.61
CD4-211ENST00000543755 IL1R1P14778 569 aa11.24□□□□□ -0.61
CD4-211ENST00000543755 TRIM32Q13049 653 aa11.24□□□□□ -0.61
CD4-211ENST00000543755 MFSD14BQ5SR56 506 aa11.24□□□□□ -0.61
CD4-211ENST00000543755 POTEEQ6S8J3 1075 aa11.24□□□□□ -0.61
CD4-211ENST00000543755 GAS2L1Q99501 681 aaPredicted RBP11.24□□□□□ -0.61
CD4-211ENST00000543755 BDP1A6H8Y1 2624 aa11.24□□□□□ -0.61
CD4-211ENST00000543755 CXCL11O14625 94 aa11.23□□□□□ -0.61
CD4-211ENST00000543755 LMOD3Q0VAK6 560 aa11.23□□□□□ -0.61
CD4-211ENST00000543755 ARAP2Q8WZ64 1704 aa11.23□□□□□ -0.61
CD4-211ENST00000543755 HOXB7P09629 217 aa11.22□□□□□ -0.61
CD4-211ENST00000543755 COL6A1P12109 1028 aa11.22□□□□□ -0.61
CD4-211ENST00000543755 INPP5BP32019 993 aa11.22□□□□□ -0.61
CD4-211ENST00000543755 CRKP46108 304 aa11.22□□□□□ -0.61
CD4-211ENST00000543755 CHRNDQ07001 517 aa11.22□□□□□ -0.61
CD4-211ENST00000543755 GADL1Q6ZQY3 521 aa11.22□□□□□ -0.61
CD4-211ENST00000543755 MIGA2Q7L4E1 593 aa11.22□□□□□ -0.61
CD4-211ENST00000543755 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
CD4-211ENST00000543755 SPEF2Q9C093 1822 aa11.22□□□□□ -0.61
CD4-211ENST00000543755 DDX58O95786 925 aaKnown RBP11.21□□□□□ -0.61
CD4-211ENST00000543755 RIPK4P57078 832 aa11.21□□□□□ -0.61
CD4-211ENST00000543755 GPAT2Q6NUI2 795 aa11.21□□□□□ -0.61
CD4-211ENST00000543755 C15orf52Q6ZUT6 534 aaKnown RBP11.21□□□□□ -0.61
CD4-211ENST00000543755 ANKRD13CQ8N6S4 541 aa11.21□□□□□ -0.61
CD4-211ENST00000543755 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.61
CD4-211ENST00000543755 SLC45A1Q9Y2W3 748 aa11.21□□□□□ -0.61
CD4-211ENST00000543755 LAS1LQ9Y4W2 734 aaKnown RBP11.21□□□□□ -0.61
CD4-211ENST00000543755 PRKAR2AP13861 404 aaKnown RBP11.2□□□□□ -0.62
CD4-211ENST00000543755 ITGA6P23229 1130 aa11.2□□□□□ -0.62
CD4-211ENST00000543755 PPP2R1AP30153 589 aa11.2□□□□□ -0.62
CD4-211ENST00000543755 ATN1P54259 1190 aaPredicted RBP11.2□□□□□ -0.62
CD4-211ENST00000543755 CACNB3P54284 484 aa11.2□□□□□ -0.62
CD4-211ENST00000543755 MOGSQ13724 837 aa11.2□□□□□ -0.62
CD4-211ENST00000543755 KRT24Q2M2I5 525 aa11.2□□□□□ -0.62
CD4-211ENST00000543755 RNPC3Q96LT9 517 aaKnown RBP11.2□□□□□ -0.62
CD4-211ENST00000543755 PLEKHF1Q96S99 279 aa11.2□□□□□ -0.62
CD4-211ENST00000543755 SENP6Q9GZR1 1112 aaPredicted RBP11.2□□□□□ -0.62
CD4-211ENST00000543755 ZNF576Q9H609 170 aa11.2□□□□□ -0.62
CD4-211ENST00000543755 PRDM5Q9NQX1 630 aaPredicted RBP11.2□□□□□ -0.62
CD4-211ENST00000543755 PNMA3Q9UL41 463 aa11.2□□□□□ -0.62
CD4-211ENST00000543755 GPR37L1O60883 481 aa11.19□□□□□ -0.62
CD4-211ENST00000543755 TAF5LO75529 589 aa11.19□□□□□ -0.62
CD4-211ENST00000543755 IGFBP4P22692 258 aa11.19□□□□□ -0.62
CD4-211ENST00000543755 DNAJB2P25686 324 aa11.19□□□□□ -0.62
CD4-211ENST00000543755 FAM110CQ1W6H9 321 aa11.19□□□□□ -0.62
CD4-211ENST00000543755 AKNAD1Q5T1N1 836 aa11.19□□□□□ -0.62
CD4-211ENST00000543755 BADQ92934 168 aa11.19□□□□□ -0.62
CD4-211ENST00000543755 TEKT1Q969V4 418 aa11.19□□□□□ -0.62
CD4-211ENST00000543755 METTL22Q9BUU2 404 aaPredicted RBP11.19□□□□□ -0.62
CD4-211ENST00000543755 PICK1Q9NRD5 415 aa11.19□□□□□ -0.62
CD4-211ENST00000543755 MUC6Q6W4X9 2439 aa11.18□□□□□ -0.62
CD4-211ENST00000543755 SMIM22K7EJ46 135 aa11.18□□□□□ -0.62
CD4-211ENST00000543755 BMP1P13497 986 aa11.18□□□□□ -0.62
CD4-211ENST00000543755 NHLH1Q02575 133 aa11.18□□□□□ -0.62
CD4-211ENST00000543755 NEXNQ0ZGT2 675 aa11.18□□□□□ -0.62
CD4-211ENST00000543755 NOL9Q5SY16 702 aaKnown RBP11.18□□□□□ -0.62
CD4-211ENST00000543755 FKBP1CQ5VVH2 108 aa11.18□□□□□ -0.62
CD4-211ENST00000543755 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
CD4-211ENST00000543755 PRDM12Q9H4Q4 367 aa11.18□□□□□ -0.62
CD4-211ENST00000543755 C11orf16Q9NQ32 467 aa11.18□□□□□ -0.62
CD4-211ENST00000543755 ATP11BQ9Y2G3 1177 aa11.18□□□□□ -0.62
CD4-211ENST00000543755 ZHX2Q9Y6X8 837 aa11.18□□□□□ -0.62
CD4-211ENST00000543755 RPAP1Q9BWH6 1393 aaPredicted RBP11.17□□□□□ -0.62
CD4-211ENST00000543755 A0A0G2JLL6 359 aaPredicted RBP11.17□□□□□ -0.62
CD4-211ENST00000543755 SNAP23O00161 211 aa11.17□□□□□ -0.62
CD4-211ENST00000543755 KCNQ1P51787 676 aa11.17□□□□□ -0.62
CD4-211ENST00000543755 HDLBPQ00341 1268 aaKnown RBP11.17□□□□□ -0.62
CD4-211ENST00000543755 TFF2Q03403 129 aa11.17□□□□□ -0.62
CD4-211ENST00000543755 PRRT2Q7Z6L0 340 aaPredicted RBP11.17□□□□□ -0.62
CD4-211ENST00000543755 TRIB2Q92519 343 aa11.17□□□□□ -0.62
CD4-211ENST00000543755 UIMC1Q96RL1 719 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms