RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	SUSD4	Q5VX71	490 aa		13.25	□□□□□ -0.29
LDHA-222	ENST00000543695	LPIN2	Q92539	896 aa		13.25	□□□□□ -0.29
LDHA-222	ENST00000543695	RPGR	Q92834	1020 aa	Known RBP	13.25	□□□□□ -0.29
LDHA-222	ENST00000543695	PDLIM2	Q96JY6	352 aa		13.25	□□□□□ -0.29
LDHA-222	ENST00000543695	FOXP2	O15409	715 aa		13.24	□□□□□ -0.29
LDHA-222	ENST00000543695	SCRN1	Q12765	414 aa		13.24	□□□□□ -0.29
LDHA-222	ENST00000543695	UVSSA	Q2YD98	709 aa		13.24	□□□□□ -0.29
LDHA-222	ENST00000543695	CRY2	Q49AN0	593 aa		13.24	□□□□□ -0.29
LDHA-222	ENST00000543695	HS1BP3	Q53T59	392 aa		13.24	□□□□□ -0.29
LDHA-222	ENST00000543695	FAM184A	Q8NB25	1140 aa		13.24	□□□□□ -0.29
LDHA-222	ENST00000543695	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.24	□□□□□ -0.29
LDHA-222	ENST00000543695	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.24	□□□□□ -0.29
LDHA-222	ENST00000543695	ZMYM6	O95789	1325 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	GPAA1	O43292	621 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	JAK2	O60674	1132 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	NTSR2	O95665	410 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	HOXD11	P31277	338 aa	Predicted RBP	13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	CLCN1	P35523	988 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	REST	Q13127	1097 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	CCDC152	Q4G0S7	254 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	CCDC102B	Q68D86	513 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	CC2D2B	Q6DHV5	1058 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	NAA16	Q6N069	864 aa	Predicted RBP	13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	NSUN7	Q8NE18	718 aa	Known RBP	13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	NLRP3	Q96P20	1036 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	SBF1	O95248	1867 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	ANKRD31	Q8N7Z5	1873 aa		13.23	□□□□□ -0.29
LDHA-222	ENST00000543695	DLEC1	Q9Y238	1755 aa		13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	SALL1	Q9NSC2	1324 aa		13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	ESPN	B1AK53	854 aa		13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	HOXA10	P31260	410 aa	Predicted RBP	13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	PHKA1	P46020	1223 aa		13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	APOBR	Q0VD83	1088 aa		13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	GRIPAP1	Q4V328	841 aa		13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	TTC6	Q86TZ1	520 aa		13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	DNAJC5G	Q8N7S2	189 aa		13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	NCOA7	Q8NI08	942 aa		13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	RBM17	Q96I25	401 aa	Known RBP	13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	LRRC2	Q9BYS8	371 aa		13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	PUS7L	Q9H0K6	701 aa	Known RBP	13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	PIH1D3	Q9NQM4	214 aa	Known RBP	13.22	□□□□□ -0.29
LDHA-222	ENST00000543695	TAF1	P21675	1872 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	POTEC	B2RU33	542 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695		H3BQV1	296 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	DDN	O94850	711 aa	Predicted RBP	13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	FGA	P02671	866 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	PDIA3	P30101	505 aa	Known RBP	13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	MCM5	P33992	734 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	IGHMBP2	P38935	993 aa	Known RBP	13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	ALX1	Q15699	326 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	IFFO2	Q5TF58	517 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	TTLL5	Q6EMB2	1281 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	OLFM4	Q6UX06	510 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	PI16	Q6UXB8	463 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	RGS22	Q8NE09	1264 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	CRAMP1	Q96RY5	1269 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	TMX4	Q9H1E5	349 aa	Predicted RBP	13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	MAST2	Q6P0Q8	1798 aa		13.21	□□□□□ -0.29
LDHA-222	ENST00000543695	CCDC88A	Q3V6T2	1871 aa		13.21	□□□□□ -0.3
LDHA-222	ENST00000543695	TCRBV5S4A2T	A0A5A2	114 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	PTPDC1	A2A3K4	754 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	ZNF213	O14771	459 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	CTDNEP1	O95476	244 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	HCLS1	P14317	486 aa	Predicted RBP	13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	PDE6A	P16499	860 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	SLC10A5	Q5PT55	438 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	ATL3	Q6DD88	541 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	RALYL	Q86SE5	291 aa	Known RBP	13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	FERMT3	Q86UX7	667 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	JDP2	Q8WYK2	163 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	PSMD1	Q99460	953 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	MPHOSPH8	Q99549	860 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	SLX4	Q8IY92	1834 aa		13.2	□□□□□ -0.3
LDHA-222	ENST00000543695	ZNF532	Q9HCE3	1301 aa		13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	IQCA1L	A6NCM1	817 aa		13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	PRC1	O43663	620 aa		13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	DTNB	O60941	627 aa		13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	IARS	P41252	1262 aa	Known RBP	13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	SLC9C2	Q5TAH2	1124 aa		13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	SPATA5	Q8NB90	893 aa		13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	LEO1	Q8WVC0	666 aa	Predicted RBP	13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	SPATA32	Q96LK8	384 aa		13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	CDC5L	Q99459	802 aa	Known RBP	13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	FUCA2	Q9BTY2	467 aa		13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	CFAP45	Q9UL16	551 aa		13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	MYH6	P13533	1939 aa		13.19	□□□□□ -0.3
LDHA-222	ENST00000543695	LAMB1	P07942	1786 aa		13.18	□□□□□ -0.3
LDHA-222	ENST00000543695	DHX16	O60231	1041 aa	Known RBP	13.18	□□□□□ -0.3
LDHA-222	ENST00000543695	IDH1	O75874	414 aa	Known RBP	13.18	□□□□□ -0.3
LDHA-222	ENST00000543695	HTRA3	P83110	453 aa		13.18	□□□□□ -0.3
LDHA-222	ENST00000543695	MAP3K12	Q12852	859 aa		13.18	□□□□□ -0.3
LDHA-222	ENST00000543695	KLRG1	Q96E93	195 aa		13.18	□□□□□ -0.3
LDHA-222	ENST00000543695	SEC31B	Q9NQW1	1179 aa		13.18	□□□□□ -0.3
LDHA-222	ENST00000543695	DDX19A	Q9NUU7	478 aa	Known RBP	13.18	□□□□□ -0.3
LDHA-222	ENST00000543695	COL11A2	P13942	1736 aa	Predicted RBP	13.18	□□□□□ -0.3
LDHA-222	ENST00000543695	COL4A1	P02462	1669 aa		13.18	□□□□□ -0.3
LDHA-222	ENST00000543695	CACNA1S	Q13698	1873 aa		13.17	□□□□□ -0.3
LDHA-222	ENST00000543695	FZD9	O00144	591 aa		13.17	□□□□□ -0.3

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