RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 ELP3Q9H9T3 547 aa8.84□□□□□ -0.99
NUP43-206ENST00000543637 USP40Q9NVE5 1235 aa8.84□□□□□ -0.99
NUP43-206ENST00000543637 ABCF2Q9UG63 623 aa8.84□□□□□ -0.99
NUP43-206ENST00000543637 PHKA1P46020 1223 aa8.83□□□□□ -1
NUP43-206ENST00000543637 GTF2A2P52657 109 aa8.83□□□□□ -1
NUP43-206ENST00000543637 CACNB3P54284 484 aa8.83□□□□□ -1
NUP43-206ENST00000543637 MLLT1Q03111 559 aaPredicted RBP8.83□□□□□ -1
NUP43-206ENST00000543637 TCP10Q12799 353 aa8.83□□□□□ -1
NUP43-206ENST00000543637 CCDC158Q5M9N0 1113 aa8.83□□□□□ -1
NUP43-206ENST00000543637 APOBEC3HQ6NTF7 200 aaKnown RBP8.83□□□□□ -1
NUP43-206ENST00000543637 ERICH6Q7L0X2 663 aa8.83□□□□□ -1
NUP43-206ENST00000543637 DZIP1Q86YF9 867 aaKnown RBP8.83□□□□□ -1
NUP43-206ENST00000543637 TMEM57Q8N5G2 664 aa8.83□□□□□ -1
NUP43-206ENST00000543637 ZNF296Q8WUU4 475 aaPredicted RBP8.83□□□□□ -1
NUP43-206ENST00000543637 XAGE2Q96GT9 111 aa8.83□□□□□ -1
NUP43-206ENST00000543637 ZNF341Q9BYN7 854 aa8.83□□□□□ -1
NUP43-206ENST00000543637 U3KPZ7 1027 aaPredicted RBP8.83□□□□□ -1
NUP43-206ENST00000543637 LAMB1P07942 1786 aa8.83□□□□□ -1
NUP43-206ENST00000543637 SALL1Q9NSC2 1324 aa8.82□□□□□ -1
NUP43-206ENST00000543637 PRDX5P30044 214 aa8.82□□□□□ -1
NUP43-206ENST00000543637 GSTO1P78417 241 aa8.82□□□□□ -1
NUP43-206ENST00000543637 ATP8B2P98198 1209 aa8.82□□□□□ -1
NUP43-206ENST00000543637 CDC42EP5Q6NZY7 148 aa8.82□□□□□ -1
NUP43-206ENST00000543637 ERO1BQ86YB8 467 aa8.82□□□□□ -1
NUP43-206ENST00000543637 ITPRIPQ8IWB1 547 aa8.82□□□□□ -1
NUP43-206ENST00000543637 ZSCAN29Q8IWY8 852 aaPredicted RBP8.82□□□□□ -1
NUP43-206ENST00000543637 ERO1AQ96HE7 468 aa8.82□□□□□ -1
NUP43-206ENST00000543637 TEPSINQ96N21 525 aa8.82□□□□□ -1
NUP43-206ENST00000543637 WRNIP1Q96S55 665 aa8.82□□□□□ -1
NUP43-206ENST00000543637 NOL10Q9BSC4 688 aaKnown RBP8.82□□□□□ -1
NUP43-206ENST00000543637 CFHR5Q9BXR6 569 aa8.82□□□□□ -1
NUP43-206ENST00000543637 ZFYVE28Q9HCC9 887 aa8.82□□□□□ -1
NUP43-206ENST00000543637 DAGLAQ9Y4D2 1042 aa8.82□□□□□ -1
NUP43-206ENST00000543637 OTOFQ9HC10 1997 aa8.82□□□□□ -1
NUP43-206ENST00000543637 AOX1Q06278 1338 aa8.81□□□□□ -1
NUP43-206ENST00000543637 CCL15-CCL14A0A0B4J2E2 113 aa8.81□□□□□ -1
NUP43-206ENST00000543637 TESPA1A2RU30 521 aaPredicted RBP8.81□□□□□ -1
NUP43-206ENST00000543637 ZBTB22O15209 634 aa8.81□□□□□ -1
NUP43-206ENST00000543637 SURF6O75683 361 aaKnown RBP8.81□□□□□ -1
NUP43-206ENST00000543637 UQCRFS1P1P0C7P4 283 aa8.81□□□□□ -1
NUP43-206ENST00000543637 CETPP11597 493 aa8.81□□□□□ -1
NUP43-206ENST00000543637 ADORA1P30542 326 aa8.81□□□□□ -1
NUP43-206ENST00000543637 VGLL4Q14135 290 aa8.81□□□□□ -1
NUP43-206ENST00000543637 KIF22Q14807 665 aa8.81□□□□□ -1
NUP43-206ENST00000543637 DIXDC1Q155Q3 683 aa8.81□□□□□ -1
NUP43-206ENST00000543637 CCL15Q16663 113 aa8.81□□□□□ -1
NUP43-206ENST00000543637 TTC39AQ5SRH9 613 aa8.81□□□□□ -1
NUP43-206ENST00000543637 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.81□□□□□ -1
NUP43-206ENST00000543637 MIGA2Q7L4E1 593 aa8.81□□□□□ -1
NUP43-206ENST00000543637 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.81□□□□□ -1
NUP43-206ENST00000543637 OTUD5Q96G74 571 aa8.81□□□□□ -1
NUP43-206ENST00000543637 CHMP4BQ9H444 224 aaKnown RBP8.81□□□□□ -1
NUP43-206ENST00000543637 LRP2BPQ9P2M1 347 aa8.81□□□□□ -1
NUP43-206ENST00000543637 PDS5AQ29RF7 1337 aaKnown RBP8.8□□□□□ -1
NUP43-206ENST00000543637 PNMA6EA0A0J9YXQ4 647 aa8.8□□□□□ -1
NUP43-206ENST00000543637 ENTPD3O75355 529 aa8.8□□□□□ -1
NUP43-206ENST00000543637 RGS19P49795 217 aa8.8□□□□□ -1
NUP43-206ENST00000543637 SP3Q02447 781 aa8.8□□□□□ -1
NUP43-206ENST00000543637 PPATQ06203 517 aa8.8□□□□□ -1
NUP43-206ENST00000543637 SNAPC2Q13487 334 aa8.8□□□□□ -1
NUP43-206ENST00000543637 TAF1CQ15572 869 aaPredicted RBP8.8□□□□□ -1
NUP43-206ENST00000543637 FBXO46Q6PJ61 603 aaPredicted RBP8.8□□□□□ -1
NUP43-206ENST00000543637 SPATA5Q8NB90 893 aa8.8□□□□□ -1
NUP43-206ENST00000543637 ZKSCAN4Q969J2 545 aaPredicted RBP8.8□□□□□ -1
NUP43-206ENST00000543637 GPR108Q9NPR9 543 aa8.8□□□□□ -1
NUP43-206ENST00000543637 RAI14Q9P0K7 980 aa8.8□□□□□ -1
NUP43-206ENST00000543637 TNNQ9UQP3 1299 aa8.8□□□□□ -1
NUP43-206ENST00000543637 TRIM17Q9Y577 477 aa8.8□□□□□ -1
NUP43-206ENST00000543637 SSC5DA1L4H1 1573 aa8.8□□□□□ -1
NUP43-206ENST00000543637 ZBED9Q6R2W3 1325 aa8.8□□□□□ -1
NUP43-206ENST00000543637 RPAP1Q9BWH6 1393 aaPredicted RBP8.79□□□□□ -1
NUP43-206ENST00000543637 IGF2BP3O00425 579 aaKnown RBP eCLIP8.79□□□□□ -1
NUP43-206ENST00000543637 ZBTB7BO15156 539 aaPredicted RBP8.79□□□□□ -1
NUP43-206ENST00000543637 BAG3O95817 575 aa8.79□□□□□ -1
NUP43-206ENST00000543637 MAP4K4O95819 1239 aaPredicted RBP8.79□□□□□ -1
NUP43-206ENST00000543637 GJA5P36382 358 aa8.79□□□□□ -1
NUP43-206ENST00000543637 RASGRF1Q13972 1273 aa8.79□□□□□ -1
NUP43-206ENST00000543637 HSP90AB4PQ58FF6 505 aa8.79□□□□□ -1
NUP43-206ENST00000543637 SSH3Q8TE77 659 aa8.79□□□□□ -1
NUP43-206ENST00000543637 FAM163AQ96GL9 167 aaPredicted RBP8.79□□□□□ -1
NUP43-206ENST00000543637 MS4A4AQ96JQ5 239 aa8.79□□□□□ -1
NUP43-206ENST00000543637 DOCK2Q92608 1830 aa8.79□□□□□ -1
NUP43-206ENST00000543637 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
NUP43-206ENST00000543637 ARID4AP29374 1257 aaPredicted RBP8.78□□□□□ -1
NUP43-206ENST00000543637 BTDP43251 543 aa8.78□□□□□ -1
NUP43-206ENST00000543637 RGS3P49796 1198 aa8.78□□□□□ -1
NUP43-206ENST00000543637 MECOMQ03112 1051 aa8.78□□□□□ -1
NUP43-206ENST00000543637 CRHR2Q13324 411 aa8.78□□□□□ -1
NUP43-206ENST00000543637 PPIL2Q13356 520 aa8.78□□□□□ -1
NUP43-206ENST00000543637 PICALMQ13492 652 aa8.78□□□□□ -1
NUP43-206ENST00000543637 POLA2Q14181 598 aa8.78□□□□□ -1
NUP43-206ENST00000543637 CDAN1Q8IWY9 1227 aa8.78□□□□□ -1
NUP43-206ENST00000543637 PTPN18Q99952 460 aa8.78□□□□□ -1
NUP43-206ENST00000543637 IDI2Q9BXS1 227 aa8.78□□□□□ -1
NUP43-206ENST00000543637 R3HDMLQ9H3Y0 253 aa8.78□□□□□ -1
NUP43-206ENST00000543637 EFCC1Q9HA90 598 aa8.78□□□□□ -1
NUP43-206ENST00000543637 ZCCHC17Q9NP64 241 aaKnown RBP8.78□□□□□ -1
NUP43-206ENST00000543637 PICK1Q9NRD5 415 aa8.78□□□□□ -1
NUP43-206ENST00000543637 HMG20BQ9P0W2 317 aa8.78□□□□□ -1
NUP43-206ENST00000543637 HPS5Q9UPZ3 1129 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms