RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 GOLGA6L4A6NEF3 574 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 GCKP35557 465 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 SCRN1Q12765 414 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 NECTIN1Q15223 517 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 PLA2G4DQ86XP0 818 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 TEX11Q8IYF3 940 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 PLBD2Q8NHP8 589 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDH4-201ENST00000543233 USP42Q9H9J4 1324 aaKnown RBP12.93□□□□□ -0.34
CDH4-201ENST00000543233 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 NEMFO60524 1076 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 SKAP2O75563 359 aaPredicted RBP12.93□□□□□ -0.34
CDH4-201ENST00000543233 AP1G2O75843 785 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 ZSCAN22P10073 491 aaPredicted RBP12.93□□□□□ -0.34
CDH4-201ENST00000543233 ZC3H12AQ5D1E8 599 aaKnown RBP12.93□□□□□ -0.34
CDH4-201ENST00000543233 ETAA1Q9NY74 926 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 IL2RBP14784 551 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 RFX5P48382 616 aaPredicted RBP12.93□□□□□ -0.34
CDH4-201ENST00000543233 INHBEP58166 350 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 CCDC158Q5M9N0 1113 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 LRRC31Q6UY01 552 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 DDX11Q96FC9 970 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 CENPHQ9H3R5 247 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 L2HGDHQ9H9P8 463 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 BSDC1Q9NW68 430 aaPredicted RBP12.93□□□□□ -0.34
CDH4-201ENST00000543233 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
CDH4-201ENST00000543233 ASAP1Q9ULH1 1129 aa12.93□□□□□ -0.34
CDH4-201ENST00000543233 UTYO14607 1347 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 FKBP4Q02790 459 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDH4-201ENST00000543233 CNNM3Q8NE01 707 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 MAP4K1Q92918 833 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 RABEP2Q9H5N1 569 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 COPRSQ9NQ92 184 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 RPAP1Q9BWH6 1393 aaPredicted RBP12.92□□□□□ -0.34
CDH4-201ENST00000543233 CLNS1AP54105 237 aaKnown RBP12.92□□□□□ -0.34
CDH4-201ENST00000543233 CCT2P78371 535 aaKnown RBP12.92□□□□□ -0.34
CDH4-201ENST00000543233 LARP1BQ659C4 914 aaKnown RBP12.92□□□□□ -0.34
CDH4-201ENST00000543233 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 CHST3Q7LGC8 479 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 KIRREL3Q8IZU9 778 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 UBXN6Q9BZV1 441 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 ZSWIM4Q9H7M6 989 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 ODF2LQ9ULJ1 636 aa12.92□□□□□ -0.34
CDH4-201ENST00000543233 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 ACBD3Q9H3P7 528 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 ZSWIM6Q9HCJ5 1215 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 SPATS2LQ9NUQ6 558 aaKnown RBP12.91□□□□□ -0.34
CDH4-201ENST00000543233 WDR17Q8IZU2 1322 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 A0A0G2JLW4 131 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 BECN2A8MW95 431 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 N4BP1O75113 896 aaKnown RBP12.91□□□□□ -0.34
CDH4-201ENST00000543233 CCNHP51946 323 aaPredicted RBP12.91□□□□□ -0.34
CDH4-201ENST00000543233 ST3GAL1Q11201 340 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 DNAJC10Q8IXB1 793 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 FAM107BQ9H098 131 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 CD248Q9HCU0 757 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
CDH4-201ENST00000543233 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 F13A1P00488 732 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 LONRF2Q1L5Z9 754 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 VPS53Q5VIR6 699 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 TMOD3Q9NYL9 352 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 AKAP2Q9Y2D5 859 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 ATP6V1DQ9Y5K8 247 aa12.91□□□□□ -0.34
CDH4-201ENST00000543233 USP54Q70EL1 1684 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 HIP1O00291 1037 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 EIF3JO75822 258 aaKnown RBP12.9□□□□□ -0.34
CDH4-201ENST00000543233 GCFC2P16383 781 aaKnown RBP12.9□□□□□ -0.34
CDH4-201ENST00000543233 NAP1L1P55209 391 aaKnown RBP12.9□□□□□ -0.34
CDH4-201ENST00000543233 PPP1R13BQ96KQ4 1090 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 FUT8Q9BYC5 575 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 CTAGE5O15320 804 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 NRDCO43847 1150 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 PPFIA4O75335 1185 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 TAF5LO75529 589 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 ERCC3P19447 782 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 NAA25Q14CX7 972 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 ANKRD18AQ8IVF6 992 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 PRDM16Q9HAZ2 1276 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 BTG4Q9NY30 223 aa12.9□□□□□ -0.34
CDH4-201ENST00000543233 JAK2O60674 1132 aa12.89□□□□□ -0.35
CDH4-201ENST00000543233 TADA3O75528 432 aa12.89□□□□□ -0.35
CDH4-201ENST00000543233 CCZ1BP86790 482 aa12.89□□□□□ -0.35
CDH4-201ENST00000543233 CCZ1P86791 482 aaPredicted RBP12.89□□□□□ -0.35
CDH4-201ENST00000543233 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
CDH4-201ENST00000543233 CAPN7Q9Y6W3 813 aa12.89□□□□□ -0.35
CDH4-201ENST00000543233 TRPM3Q9HCF6 1732 aaPredicted RBP12.89□□□□□ -0.35
CDH4-201ENST00000543233 PSMA5P28066 241 aa12.89□□□□□ -0.35
CDH4-201ENST00000543233 FOXO4P98177 505 aa12.89□□□□□ -0.35
CDH4-201ENST00000543233 TBC1D8BQ0IIM8 1120 aa12.89□□□□□ -0.35
CDH4-201ENST00000543233 CDC37L1Q7L3B6 337 aa12.89□□□□□ -0.35
CDH4-201ENST00000543233 CEP57Q86XR8 500 aa12.89□□□□□ -0.35
CDH4-201ENST00000543233 TMEM87AQ8NBN3 555 aa12.89□□□□□ -0.35
CDH4-201ENST00000543233 EME2A4GXA9 379 aaPredicted RBP12.88□□□□□ -0.35
CDH4-201ENST00000543233 EFCAB8A8MWE9 144 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 ATP5JP18859 108 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 INPP5BP32019 993 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms