RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 NFIXQ14938 502 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 HLFQ16534 295 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 NBPF20Q3BBV1 942 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 ALDH1L2Q3SY69 923 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 HSP90AB3PQ58FF7 597 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 TBC1D9BQ66K14 1250 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 SSH1Q8WYL5 1049 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 MRGPRX2Q96LB1 330 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 SETDB2Q96T68 719 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 SMC4Q9NTJ3 1288 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 TLL2Q9Y6L7 1015 aa6.43□□□□□ -1.38
CLIP1-217ENST00000543205 SOWAHDA6NJG2 315 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 NPHP1O15259 732 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 TM4SF1P30408 202 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 FKBP5Q13451 457 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-217ENST00000543205 SLFNL1Q499Z3 407 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 G2E3Q7L622 706 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 VASH1Q7L8A9 365 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-217ENST00000543205 VTI1AQ96AJ9 217 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 CEP126Q9P2H0 1117 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 KLHL42Q9P2K6 505 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 CDV3Q9UKY7 258 aaKnown RBP6.42□□□□□ -1.38
CLIP1-217ENST00000543205 NIP7Q9Y221 180 aaKnown RBP eCLIP6.42□□□□□ -1.38
CLIP1-217ENST00000543205 MAFBQ9Y5Q3 323 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-217ENST00000543205 C4AP0C0L4 1744 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 POLRMTO00411 1230 aaKnown RBP6.42□□□□□ -1.38
CLIP1-217ENST00000543205 SERPINB2P05120 415 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 RARSP54136 660 aaKnown RBP6.42□□□□□ -1.38
CLIP1-217ENST00000543205 TCIRG1Q13488 830 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 C9orf131Q5VYM1 1079 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 KSR2Q6VAB6 950 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 NBPF5PQ86XG9 351 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-217ENST00000543205 MAP3K2Q9Y2U5 619 aa6.42□□□□□ -1.38
CLIP1-217ENST00000543205 CARMIL3Q8ND23 1372 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 PI4KAP2A4QPH2 592 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 FAM177BA6PVY3 158 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 GPTP24298 496 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 GTF2E1P29083 439 aaPredicted RBP6.41□□□□□ -1.38
CLIP1-217ENST00000543205 SCNN1AP37088 669 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 DDR1Q08345 913 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 NEXNQ0ZGT2 675 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 TSNAXIP1Q2TAA8 658 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 TRIM67Q6ZTA4 783 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 RNF135Q8IUD6 432 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 PI4KAP1Q8N8J0 262 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 MYD88Q99836 296 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 LNPKQ9C0E8 428 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 UTRNP46939 3433 aa6.41□□□□□ -1.38
CLIP1-217ENST00000543205 PTPRCP08575 1304 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 ATP5J2-PTCD1G3V325 749 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 PIK3CDO00329 1044 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 TPD52L2O43399 206 aaKnown RBP6.4□□□□□ -1.38
CLIP1-217ENST00000543205 RAB15P59190 212 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 PARP10Q53GL7 1025 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 B4GALNT3Q6L9W6 998 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 TPTE2Q6XPS3 522 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 PPP1R42Q7Z4L9 355 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 ZNF34Q8IZ26 560 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 KCTD15Q96SI1 283 aaPredicted RBP6.4□□□□□ -1.38
CLIP1-217ENST00000543205 METTL22Q9BUU2 404 aaPredicted RBP6.4□□□□□ -1.38
CLIP1-217ENST00000543205 NYXQ9GZU5 481 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 NOB1Q9ULX3 412 aaKnown RBP6.4□□□□□ -1.38
CLIP1-217ENST00000543205 MAP4K5Q9Y4K4 846 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 ATP10DQ9P241 1426 aa6.4□□□□□ -1.38
CLIP1-217ENST00000543205 SCN7AQ01118 1682 aa6.4□□□□□ -1.39
CLIP1-217ENST00000543205 KIF16BQ96L93 1317 aa6.4□□□□□ -1.39
CLIP1-217ENST00000543205 IPO8O15397 1037 aaKnown RBP6.4□□□□□ -1.39
CLIP1-217ENST00000543205 BCAR3O75815 825 aa6.4□□□□□ -1.39
CLIP1-217ENST00000543205 SKIP12755 728 aa6.4□□□□□ -1.39
CLIP1-217ENST00000543205 ERCC5P28715 1186 aaPredicted RBP6.4□□□□□ -1.39
CLIP1-217ENST00000543205 ST5P78524 1137 aa6.4□□□□□ -1.39
CLIP1-217ENST00000543205 SUSD4Q5VX71 490 aa6.4□□□□□ -1.39
CLIP1-217ENST00000543205 EXOC8Q8IYI6 725 aa6.4□□□□□ -1.39
CLIP1-217ENST00000543205 CNBD1Q8NA66 436 aa6.4□□□□□ -1.39
CLIP1-217ENST00000543205 DNAAF4Q8WXU2 420 aa6.4□□□□□ -1.39
CLIP1-217ENST00000543205 FRAT1Q92837 279 aaPredicted RBP6.4□□□□□ -1.39
CLIP1-217ENST00000543205 UTP14AQ9BVJ6 771 aaKnown RBP6.4□□□□□ -1.39
CLIP1-217ENST00000543205 PKD2L1Q9P0L9 805 aa6.4□□□□□ -1.39
CLIP1-217ENST00000543205 ADCY9O60503 1353 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 UBN2Q6ZU65 1347 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 CEP350Q5VT06 3117 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 A0A0U1RQG5 324 aaPredicted RBP6.39□□□□□ -1.39
CLIP1-217ENST00000543205 F6X3S4 739 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 TNFRSF10AO00220 468 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 SIAH2O43255 324 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 FSHRP23945 695 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 SLC4A10Q6U841 1118 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 TBC1D9Q6ZT07 1266 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 FBXO33Q7Z6M2 555 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 NLRP10Q86W26 655 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 LARGE2Q8N3Y3 721 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 ISCA1Q9BUE6 129 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 API5Q9BZZ5 524 aaKnown RBP6.39□□□□□ -1.39
CLIP1-217ENST00000543205 TRMT112Q9UI30 125 aaKnown RBP6.39□□□□□ -1.39
CLIP1-217ENST00000543205 RCAN3Q9UKA8 241 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 BCORQ6W2J9 1755 aa6.39□□□□□ -1.39
CLIP1-217ENST00000543205 TRIM28Q13263 835 aaKnown RBP6.38□□□□□ -1.39
CLIP1-217ENST00000543205 RNF20Q5VTR2 975 aa6.38□□□□□ -1.39
CLIP1-217ENST00000543205 PRR5LQ6MZQ0 368 aa6.38□□□□□ -1.39
CLIP1-217ENST00000543205 CCDC191Q8NCU4 936 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms