RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 NPR1P16066 1061 aa10.72□□□□□ -0.69
CLPB-211ENST00000542555 ALDH1B1P30837 517 aa10.72□□□□□ -0.69
CLPB-211ENST00000542555 GPC1P35052 558 aa10.72□□□□□ -0.69
CLPB-211ENST00000542555 MAP1SQ66K74 1059 aaPredicted RBP10.72□□□□□ -0.69
CLPB-211ENST00000542555 CAPNS2Q96L46 248 aa10.72□□□□□ -0.69
CLPB-211ENST00000542555 GPR101Q96P66 508 aaPredicted RBP10.72□□□□□ -0.69
CLPB-211ENST00000542555 SLC24A3Q9HC58 644 aa10.72□□□□□ -0.69
CLPB-211ENST00000542555 KNSTRNQ9Y448 316 aa10.72□□□□□ -0.69
CLPB-211ENST00000542555 ESPNB1AK53 854 aa10.71□□□□□ -0.69
CLPB-211ENST00000542555 CA12O43570 354 aa10.71□□□□□ -0.69
CLPB-211ENST00000542555 RGS19P49795 217 aa10.71□□□□□ -0.69
CLPB-211ENST00000542555 TPTE2Q6XPS3 522 aa10.71□□□□□ -0.69
CLPB-211ENST00000542555 GPC2Q8N158 579 aa10.71□□□□□ -0.69
CLPB-211ENST00000542555 TMX4Q9H1E5 349 aaPredicted RBP10.71□□□□□ -0.69
CLPB-211ENST00000542555 PANK3Q9H999 370 aa10.71□□□□□ -0.69
CLPB-211ENST00000542555 ZNF277Q9NRM2 450 aaPredicted RBP10.71□□□□□ -0.69
CLPB-211ENST00000542555 SCN11AQ9UI33 1791 aa10.71□□□□□ -0.69
CLPB-211ENST00000542555 ADAMTS7Q9UKP4 1686 aa10.71□□□□□ -0.69
CLPB-211ENST00000542555 FER1L6Q2WGJ9 1857 aa10.7□□□□□ -0.7
CLPB-211ENST00000542555 RNF123Q5XPI4 1314 aa10.7□□□□□ -0.7
CLPB-211ENST00000542555 K7ELQ4 463 aaPredicted RBP10.7□□□□□ -0.7
CLPB-211ENST00000542555 PROCP04070 461 aa10.7□□□□□ -0.7
CLPB-211ENST00000542555 HMOX1P09601 288 aa10.7□□□□□ -0.7
CLPB-211ENST00000542555 IL13P35225 146 aa10.7□□□□□ -0.7
CLPB-211ENST00000542555 IARSP41252 1262 aaKnown RBP10.7□□□□□ -0.7
CLPB-211ENST00000542555 NLRP3Q96P20 1036 aa10.7□□□□□ -0.7
CLPB-211ENST00000542555 FMNL2Q96PY5 1086 aa10.7□□□□□ -0.7
CLPB-211ENST00000542555 DDX21Q9NR30 783 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLPB-211ENST00000542555 GJA3Q9Y6H8 435 aa10.7□□□□□ -0.7
CLPB-211ENST00000542555 ZNF541Q9H0D2 1346 aa10.69□□□□□ -0.7
CLPB-211ENST00000542555 ITGB2P05107 769 aa10.69□□□□□ -0.7
CLPB-211ENST00000542555 MAP2K2P36507 400 aa10.69□□□□□ -0.7
CLPB-211ENST00000542555 POU4F2Q12837 409 aa10.69□□□□□ -0.7
CLPB-211ENST00000542555 SYNE4Q8N205 404 aa10.69□□□□□ -0.7
CLPB-211ENST00000542555 EPS8L1Q8TE68 723 aa10.69□□□□□ -0.7
CLPB-211ENST00000542555 HEG1Q9ULI3 1381 aa10.68□□□□□ -0.7
CLPB-211ENST00000542555 MTHFSDQ2M296 383 aaKnown RBP10.68□□□□□ -0.7
CLPB-211ENST00000542555 CC2D2BQ6DHV5 1058 aa10.68□□□□□ -0.7
CLPB-211ENST00000542555 ZNF790Q6PG37 636 aa10.68□□□□□ -0.7
CLPB-211ENST00000542555 CLEC4GQ6UXB4 293 aa10.68□□□□□ -0.7
CLPB-211ENST00000542555 PROCA1Q8NCQ7 364 aaPredicted RBP10.68□□□□□ -0.7
CLPB-211ENST00000542555 MRC1P22897 1456 aa10.68□□□□□ -0.7
CLPB-211ENST00000542555 A0A1W2PRU2 124 aa10.67□□□□□ -0.7
CLPB-211ENST00000542555 GNAT3A8MTJ3 354 aa10.67□□□□□ -0.7
CLPB-211ENST00000542555 FZD9O00144 591 aa10.67□□□□□ -0.7
CLPB-211ENST00000542555 DIAPH1O60610 1272 aaKnown RBP10.67□□□□□ -0.7
CLPB-211ENST00000542555 CAMTA2O94983 1202 aa10.67□□□□□ -0.7
CLPB-211ENST00000542555 A1BGP04217 495 aa10.67□□□□□ -0.7
CLPB-211ENST00000542555 CYP4F22Q6NT55 531 aa10.67□□□□□ -0.7
CLPB-211ENST00000542555 USP50Q70EL3 339 aaPredicted RBP10.67□□□□□ -0.7
CLPB-211ENST00000542555 GAS2L2Q8NHY3 880 aa10.67□□□□□ -0.7
CLPB-211ENST00000542555 ZNF496Q96IT1 587 aaPredicted RBP10.67□□□□□ -0.7
CLPB-211ENST00000542555 TIMELESSQ9UNS1 1208 aa10.67□□□□□ -0.7
CLPB-211ENST00000542555 VIRMAQ69YN4 1812 aaKnown RBP10.67□□□□□ -0.7
CLPB-211ENST00000542555 OIP5O43482 229 aa10.66□□□□□ -0.7
CLPB-211ENST00000542555 EIF4G2P78344 907 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLPB-211ENST00000542555 DGKZQ13574 1117 aa10.66□□□□□ -0.7
CLPB-211ENST00000542555 C7orf43Q8WVR3 580 aa10.66□□□□□ -0.7
CLPB-211ENST00000542555 MCOLN1Q9GZU1 580 aa10.66□□□□□ -0.7
CLPB-211ENST00000542555 NIP7Q9Y221 180 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLPB-211ENST00000542555 ANKRD31Q8N7Z5 1873 aa10.66□□□□□ -0.7
CLPB-211ENST00000542555 SLX4Q8IY92 1834 aa10.65□□□□□ -0.7
CLPB-211ENST00000542555 FAM177BA6PVY3 158 aa10.65□□□□□ -0.7
CLPB-211ENST00000542555 BTBD11A6QL63 1104 aa10.65□□□□□ -0.7
CLPB-211ENST00000542555 MAP2K3P46734 347 aa10.65□□□□□ -0.7
CLPB-211ENST00000542555 SH3D19Q5HYK7 790 aa10.65□□□□□ -0.7
CLPB-211ENST00000542555 NIM1KQ8IY84 436 aa10.65□□□□□ -0.7
CLPB-211ENST00000542555 LARGE2Q8N3Y3 721 aa10.65□□□□□ -0.7
CLPB-211ENST00000542555 RPGRQ92834 1020 aaKnown RBP10.65□□□□□ -0.7
CLPB-211ENST00000542555 PSMD1Q99460 953 aa10.65□□□□□ -0.7
CLPB-211ENST00000542555 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLPB-211ENST00000542555 OXCT2Q9BYC2 517 aaPredicted RBP10.65□□□□□ -0.7
CLPB-211ENST00000542555 NUCKS1Q9H1E3 243 aaKnown RBP10.65□□□□□ -0.7
CLPB-211ENST00000542555 COL11A2P13942 1736 aaPredicted RBP10.64□□□□□ -0.71
CLPB-211ENST00000542555 CACNA1SQ13698 1873 aa10.64□□□□□ -0.71
CLPB-211ENST00000542555 SCN7AQ01118 1682 aa10.64□□□□□ -0.71
CLPB-211ENST00000542555 U2SURPO15042 1029 aaKnown RBP10.64□□□□□ -0.71
CLPB-211ENST00000542555 NYXQ9GZU5 481 aa10.64□□□□□ -0.71
CLPB-211ENST00000542555 TIMMDC1Q9NPL8 285 aa10.64□□□□□ -0.71
CLPB-211ENST00000542555 MKL2Q9ULH7 1088 aa10.64□□□□□ -0.71
CLPB-211ENST00000542555 USP17L8P0C7I0 530 aa10.63□□□□□ -0.71
CLPB-211ENST00000542555 BRPF1P55201 1214 aaPredicted RBP10.63□□□□□ -0.71
CLPB-211ENST00000542555 NBPF10Q6P3W6 841 aaKnown RBP10.63□□□□□ -0.71
CLPB-211ENST00000542555 NBPF15Q8N660 670 aa10.63□□□□□ -0.71
CLPB-211ENST00000542555 HMX1Q9NP08 348 aaPredicted RBP10.63□□□□□ -0.71
CLPB-211ENST00000542555 ADARB2Q9NS39 739 aaKnown RBP10.63□□□□□ -0.71
CLPB-211ENST00000542555 PCDHB9Q9Y5E1 797 aa10.63□□□□□ -0.71
CLPB-211ENST00000542555 ARFGEF2Q9Y6D5 1785 aa10.62□□□□□ -0.71
CLPB-211ENST00000542555 KLRG2A4D1S0 409 aaPredicted RBP10.62□□□□□ -0.71
CLPB-211ENST00000542555 AOC2O75106 756 aa10.62□□□□□ -0.71
CLPB-211ENST00000542555 CELF2O95319 508 aaKnown RBP10.62□□□□□ -0.71
CLPB-211ENST00000542555 SNRPA1P09661 255 aaKnown RBP10.62□□□□□ -0.71
CLPB-211ENST00000542555 EPS15P42566 896 aa10.62□□□□□ -0.71
CLPB-211ENST00000542555 ALYREFQ86V81 257 aaKnown RBP10.62□□□□□ -0.71
CLPB-211ENST00000542555 RTF1Q92541 710 aaKnown RBP10.62□□□□□ -0.71
CLPB-211ENST00000542555 HHIPL1Q96JK4 782 aa10.62□□□□□ -0.71
CLPB-211ENST00000542555 ZNF408Q9H9D4 720 aa10.62□□□□□ -0.71
CLPB-211ENST00000542555 PCNTO95613 3336 aa10.62□□□□□ -0.71
CLPB-211ENST00000542555 TRAF5O00463 557 aa10.61□□□□□ -0.71
CLPB-211ENST00000542555 F11P03951 625 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms