RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 SEMA3EO15041 775 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 CTDSPL2Q05D32 466 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 CPLX2Q6PUV4 134 aaKnown RBP12.65□□□□□ -0.38
NECAP1-206ENST00000542095 MFSD6Q6ZSS7 791 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 RAB11FIP4Q86YS3 637 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 MIGA1Q8NAN2 632 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 IGDCC4Q8TDY8 1250 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 STAG1Q8WVM7 1258 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 ANKRD2Q9GZV1 360 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 TNMDQ9H2S6 317 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 DACT1Q9NYF0 836 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 PRKAB2O43741 272 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 TMEM67Q5HYA8 995 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 APOA5Q6Q788 366 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 NFXL1Q6ZNB6 911 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 SGMS1Q86VZ5 419 aa12.65□□□□□ -0.38
NECAP1-206ENST00000542095 MAST2Q6P0Q8 1798 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 MAGEB6P1A0A0J9YX57 407 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 ZBTB43O43298 467 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 LIFRP42702 1097 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 CEBPZQ03701 1054 aaKnown RBP12.64□□□□□ -0.39
NECAP1-206ENST00000542095 ZSCAN30Q86W11 494 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 FBXO18Q8NFZ0 1043 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 NKX2-3Q8TAU0 364 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 FAM84BQ96KN1 310 aaPredicted RBP12.64□□□□□ -0.39
NECAP1-206ENST00000542095 CLSTN2Q9H4D0 955 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 RNF41Q9H4P4 317 aaPredicted RBP12.64□□□□□ -0.39
NECAP1-206ENST00000542095 LY9Q9HBG7 655 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 BAZ2AQ9UIF9 1905 aaKnown RBP12.64□□□□□ -0.39
NECAP1-206ENST00000542095 TNRC6CQ9HCJ0 1690 aaKnown RBP12.64□□□□□ -0.39
NECAP1-206ENST00000542095 KDM4AO75164 1064 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 RFC4P35249 363 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 FBXO33Q7Z6M2 555 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 USP28Q96RU2 1077 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 ZSWIM5Q9P217 1185 aa12.64□□□□□ -0.39
NECAP1-206ENST00000542095 IFIT3O14879 490 aaKnown RBP12.63□□□□□ -0.39
NECAP1-206ENST00000542095 NPHP1O15259 732 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 SART3Q15020 963 aaKnown RBP12.63□□□□□ -0.39
NECAP1-206ENST00000542095 TRAPPC3LQ5T215 181 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 BRAPQ7Z569 592 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
NECAP1-206ENST00000542095 MTA3Q9BTC8 594 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 AFF2P51816 1311 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 PDS5AQ29RF7 1337 aaKnown RBP12.63□□□□□ -0.39
NECAP1-206ENST00000542095 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 WTIPA6NIX2 430 aaPredicted RBP12.63□□□□□ -0.39
NECAP1-206ENST00000542095 NR1I2O75469 434 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 CAMK4Q16566 473 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 SYNE3Q6ZMZ3 975 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 ADGRA1Q86SQ6 560 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 MICU3Q86XE3 530 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 INCENPQ9NQS7 918 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 SLC12A7Q9Y666 1083 aa12.63□□□□□ -0.39
NECAP1-206ENST00000542095 UBR3Q6ZT12 1888 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 MYH2Q9UKX2 1941 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 GOLGA8AA7E2F4 631 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 MSNP26038 577 aaKnown RBP12.62□□□□□ -0.39
NECAP1-206ENST00000542095 RRP12Q5JTH9 1297 aaKnown RBP12.62□□□□□ -0.39
NECAP1-206ENST00000542095 RBM43Q6ZSC3 357 aaKnown RBP12.62□□□□□ -0.39
NECAP1-206ENST00000542095 FTOQ9C0B1 505 aaKnown RBP eCLIP12.62□□□□□ -0.39
NECAP1-206ENST00000542095 SENP2Q9HC62 589 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 TOMM22Q9NS69 142 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 RTEL1Q9NZ71 1219 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 MYH6P13533 1939 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 ERICH2A1L162 156 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 ONECUT3O60422 494 aaPredicted RBP12.62□□□□□ -0.39
NECAP1-206ENST00000542095 TYRO3Q06418 890 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 PPARAQ07869 468 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 OTUD7BQ6GQQ9 843 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 ALG1Q9BT22 464 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 TRPC5Q9UL62 973 aaPredicted RBP12.62□□□□□ -0.39
NECAP1-206ENST00000542095 TACC3Q9Y6A5 838 aa12.62□□□□□ -0.39
NECAP1-206ENST00000542095 NID2Q14112 1375 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 LAMB1P07942 1786 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 RXRAP19793 462 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 CDC27P30260 824 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 HIBADHP31937 336 aaKnown RBP12.61□□□□□ -0.39
NECAP1-206ENST00000542095 WTAPQ15007 396 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 CCDC73Q6ZRK6 1079 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 CCAR1Q8IX12 1150 aaKnown RBP12.61□□□□□ -0.39
NECAP1-206ENST00000542095 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 CCDC24Q8N4L8 307 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 SDR42E1Q8WUS8 393 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 RIOK1Q9BRS2 568 aaKnown RBP12.61□□□□□ -0.39
NECAP1-206ENST00000542095 ANAPC4Q9UJX5 808 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 ADRA2BP18089 450 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 TM4SF1P30408 202 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 IARSP41252 1262 aaKnown RBP12.61□□□□□ -0.39
NECAP1-206ENST00000542095 ME1P48163 572 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 CKAP2LQ8IYA6 745 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 SEPT12Q8IYM1 358 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
NECAP1-206ENST00000542095 USP25Q9UHP3 1055 aa12.61□□□□□ -0.39
NECAP1-206ENST00000542095 NOL7Q9UMY1 257 aaKnown RBP12.61□□□□□ -0.39
NECAP1-206ENST00000542095 STK36Q9NRP7 1315 aa12.6□□□□□ -0.39
NECAP1-206ENST00000542095 MINDY4BA8MYZ0 360 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms